RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C UPC2Q12151 913 aa3.22□□□□□ -1.89
CDH1YGL003C HER1Q12276 1246 aa3.22□□□□□ -1.89
CDH1YGL003C YOL114CQ12322 202 aa3.22□□□□□ -1.89
CDH1YGL003C ARP7Q12406 477 aa3.22□□□□□ -1.89
CDH1YGL003C KCS1Q12494 1050 aa3.22□□□□□ -1.89
CDH1YGL003C CMC2Q3E7A4 109 aa3.22□□□□□ -1.89
CDH1YGL003C YLR149CQ99296 730 aa3.22□□□□□ -1.89
CDH1YGL003C SIR4P11978 1358 aa3.22□□□□□ -1.89
CDH1YGL003C LTE1P07866 1435 aa3.22□□□□□ -1.89
CDH1YGL003C IML1P47170 1584 aa3.22□□□□□ -1.89
CDH1YGL003C TDH1P00360 332 aaKnown RBP3.22□□□□□ -1.89
CDH1YGL003C TEF1P02994 458 aaKnown RBP3.22□□□□□ -1.89
CDH1YGL003C RAD1P06777 1100 aa3.22□□□□□ -1.89
CDH1YGL003C VAS1P07806 1104 aaKnown RBP3.22□□□□□ -1.89
CDH1YGL003C TAL1P15019 335 aaKnown RBP3.22□□□□□ -1.89
CDH1YGL003C TYR1P20049 452 aa3.22□□□□□ -1.89
CDH1YGL003C UBC1P21734 215 aaKnown RBP3.22□□□□□ -1.89
CDH1YGL003C SGF29P25554 259 aa3.22□□□□□ -1.89
CDH1YGL003C EFT1P32324 842 aaKnown RBP3.22□□□□□ -1.89
CDH1YGL003C PDB1P32473 366 aaKnown RBP3.22□□□□□ -1.89
CDH1YGL003C MGM101P32787 269 aaKnown RBP3.22□□□□□ -1.89
CDH1YGL003C LOS1P33418 1100 aaPredicted RBP3.22□□□□□ -1.89
CDH1YGL003C YKR051WP36142 418 aa3.22□□□□□ -1.89
CDH1YGL003C FLR1P38124 548 aa3.22□□□□□ -1.89
CDH1YGL003C OSH3P38713 996 aaKnown RBP3.22□□□□□ -1.89
CDH1YGL003C TDA3P38758 523 aa3.22□□□□□ -1.89
CDH1YGL003C LIN1P38852 340 aaPredicted RBP3.22□□□□□ -1.89
CDH1YGL003C KEL1P38853 1164 aaKnown RBP3.22□□□□□ -1.89
CDH1YGL003C YDR089WP38966 869 aa3.22□□□□□ -1.89
CDH1YGL003C DPH1P40487 425 aaKnown RBP3.22□□□□□ -1.89
CDH1YGL003C YIL077CP40508 320 aa3.22□□□□□ -1.89
CDH1YGL003C SPO22P40511 975 aa3.22□□□□□ -1.89
CDH1YGL003C YIL001WP40560 513 aa3.22□□□□□ -1.89
CDH1YGL003C CHA4P43634 648 aa3.22□□□□□ -1.89
CDH1YGL003C ROK1P45818 564 aaPredicted RBP3.22□□□□□ -1.89
CDH1YGL003C SSY5P47002 699 aa3.22□□□□□ -1.89
CDH1YGL003C GCV2P49095 1034 aa3.22□□□□□ -1.89
CDH1YGL003C TOM22P49334 152 aa3.22□□□□□ -1.89
CDH1YGL003C PAN2P53010 1115 aaPredicted RBP3.22□□□□□ -1.89
CDH1YGL003C LCL3P53153 274 aa3.22□□□□□ -1.89
CDH1YGL003C VPS62P53285 467 aa3.22□□□□□ -1.89
CDH1YGL003C RPM2Q02773 1202 aa3.22□□□□□ -1.89
CDH1YGL003C MRPS17Q03246 237 aaPredicted RBP3.22□□□□□ -1.89
CDH1YGL003C ROT1Q03691 256 aa3.22□□□□□ -1.89
CDH1YGL003C DON1Q05610 365 aa3.22□□□□□ -1.89
CDH1YGL003C SPH1Q06160 661 aa3.22□□□□□ -1.89
CDH1YGL003C RXT3Q07458 294 aa3.22□□□□□ -1.89
CDH1YGL003C VAM6Q07468 1049 aa3.22□□□□□ -1.89
CDH1YGL003C BUD7Q08754 746 aa3.22□□□□□ -1.89
CDH1YGL003C GPB1Q08886 897 aa3.22□□□□□ -1.89
CDH1YGL003C RTN2Q12443 393 aa3.22□□□□□ -1.89
CDH1YGL003C GCN4P03069 281 aa3.21□□□□□ -1.9
CDH1YGL003C LEU2P04173 364 aaPredicted RBP3.21□□□□□ -1.9
CDH1YGL003C CDC6P09119 513 aa3.21□□□□□ -1.9
CDH1YGL003C RPS21AP0C0V8 87 aaKnown RBP3.21□□□□□ -1.9
CDH1YGL003C MTF2P10849 440 aa3.21□□□□□ -1.9
CDH1YGL003C SEC18P18759 758 aaKnown RBP3.21□□□□□ -1.9
CDH1YGL003C COX11P19516 300 aaKnown RBP3.21□□□□□ -1.9
CDH1YGL003C OLE1P21147 510 aaKnown RBP3.21□□□□□ -1.9
CDH1YGL003C ARG1P22768 420 aa3.21□□□□□ -1.9
CDH1YGL003C CAD1P24813 409 aaKnown RBP3.21□□□□□ -1.9
CDH1YGL003C STE14P32584 239 aa3.21□□□□□ -1.9
CDH1YGL003C PHO11P35842 467 aa3.21□□□□□ -1.9
CDH1YGL003C DAD2P36162 133 aa3.21□□□□□ -1.9
CDH1YGL003C SRL3P36167 246 aa3.21□□□□□ -1.9
CDH1YGL003C PHO12P38693 467 aa3.21□□□□□ -1.9
CDH1YGL003C SIP3P38717 1229 aa3.21□□□□□ -1.9
CDH1YGL003C HXT6P39003 570 aaKnown RBP3.21□□□□□ -1.9
CDH1YGL003C HXT7P39004 570 aa3.21□□□□□ -1.9
CDH1YGL003C STB1P42845 420 aa3.21□□□□□ -1.9
CDH1YGL003C TRS85P46944 698 aa3.21□□□□□ -1.9
CDH1YGL003C YJR039WP47107 1121 aa3.21□□□□□ -1.9
CDH1YGL003C YJR079WP47126 109 aa3.21□□□□□ -1.9
CDH1YGL003C RBL2P48606 106 aaKnown RBP3.21□□□□□ -1.9
CDH1YGL003C FMS1P50264 508 aa3.21□□□□□ -1.9
CDH1YGL003C ASE1P50275 885 aa3.21□□□□□ -1.9
CDH1YGL003C YGR067CP53243 804 aa3.21□□□□□ -1.9
CDH1YGL003C RRP46P53256 223 aaPredicted RBP3.21□□□□□ -1.9
CDH1YGL003C GTF1P53260 183 aaPredicted RBP3.21□□□□□ -1.9
CDH1YGL003C HEF3P53978 1044 aaKnown RBP3.21□□□□□ -1.9
CDH1YGL003C OAZ1Q02803 292 aa3.21□□□□□ -1.9
CDH1YGL003C FMP30Q02883 468 aa3.21□□□□□ -1.9
CDH1YGL003C GCN5Q03330 439 aa3.21□□□□□ -1.9
CDH1YGL003C YDR132CQ03900 495 aa3.21□□□□□ -1.9
CDH1YGL003C DUS4Q06063 367 aa3.21□□□□□ -1.9
CDH1YGL003C BOP2Q06150 570 aa3.21□□□□□ -1.9
CDH1YGL003C THI22Q06490 572 aa3.21□□□□□ -1.9
CDH1YGL003C WHI4Q07655 649 aaKnown RBP3.21□□□□□ -1.9
CDH1YGL003C NOP12Q08208 459 aaKnown RBP3.21□□□□□ -1.9
CDH1YGL003C VPS54Q12071 889 aa3.21□□□□□ -1.9
CDH1YGL003C RBD2Q12270 262 aa3.21□□□□□ -1.9
CDH1YGL003C PSY3Q12318 242 aa3.21□□□□□ -1.9
CDH1YGL003C PFK27Q12471 397 aaPredicted RBP3.21□□□□□ -1.9
CDH1YGL003C AVL9Q12500 764 aa3.21□□□□□ -1.9
CDH1YGL003C LAG2Q92325 660 aa3.21□□□□□ -1.9
CDH1YGL003C LAM4P38800 1345 aa3.21□□□□□ -1.9
CDH1YGL003C BUD3P25558 1636 aa3.21□□□□□ -1.9
CDH1YGL003C NUP192P47054 1683 aa3.2□□□□□ -1.9
CDH1YGL003C YML002WP0CF17 737 aa3.2□□□□□ -1.9
CDH1YGL003C ADE2P21264 571 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms