RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	DCN1	Q12395	269 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	TUB2	P02557	457 aa	Known RBP	5.21	□□□□□ -1.57
DBF4	YDR052C	CBP2	P03874	630 aa	Predicted RBP	5.21	□□□□□ -1.57
DBF4	YDR052C	COX4	P04037	155 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	RHO1	P06780	209 aa	Known RBP	5.21	□□□□□ -1.57
DBF4	YDR052C	HOM3	P10869	527 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	ABF1	P14164	731 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	CHL1	P22516	861 aa	Predicted RBP	5.21	□□□□□ -1.57
DBF4	YDR052C	AAD3	P25612	363 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	TRM2	P33753	639 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	SDS22	P36047	338 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	YBR137W	P38276	179 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	GLO3	P38682	493 aa	Known RBP	5.21	□□□□□ -1.57
DBF4	YDR052C	VPS29	P38759	282 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	TIF11	P38912	153 aa	Known RBP	5.21	□□□□□ -1.57
DBF4	YDR052C	PHM8	P40025	321 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	YMR134W	P40207	237 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	TIR3	P40552	269 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.57	not detected
DBF4	YDR052C	YGL036W	P53185	909 aa	Predicted RBP	5.21	□□□□□ -1.57
DBF4	YDR052C	NSE3	Q05541	303 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	YDR278C	Q05612	105 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	YFT2	Q06676	274 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	GSH2	Q08220	491 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	YNG1	Q08465	219 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	LYS21	Q12122	440 aa	Known RBP	5.21	□□□□□ -1.57
DBF4	YDR052C	SKM1	Q12469	655 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	AVL9	Q12500	764 aa		5.21	□□□□□ -1.57
DBF4	YDR052C	UBR1	P19812	1950 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	TRP3	P00937	484 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	CHS2	P14180	963 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	HEM15	P16622	393 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	HPR1	P17629	752 aa	Known RBP	5.21	□□□□□ -1.58
DBF4	YDR052C	AMD2	P22580	549 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	DBP2	P24783	546 aa	Known RBP	5.21	□□□□□ -1.58
DBF4	YDR052C	FUN26	P31381	517 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	HIR1	P32479	840 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	RRN6	P32786	894 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	ATG7	P38862	630 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	YDR089W	P38966	869 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	STT3	P39007	718 aa	Known RBP	5.21	□□□□□ -1.58
DBF4	YDR052C	AKR1	P39010	764 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	SAW1	P39735	261 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	PZF1	P39933	429 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	LCP5	P40079	357 aa	Predicted RBP	5.21	□□□□□ -1.58
DBF4	YDR052C	RFC2	P40348	353 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	CIN1	P40987	1014 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	EMP47	P43555	445 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	GLG2	P47011	380 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	COX16	P47081	118 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	LIA1	P47120	325 aa	Known RBP	5.21	□□□□□ -1.58
DBF4	YDR052C	MND1	P53102	219 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	SLI1	P53304	468 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	YNL146W	P53906	100 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	YMR099C	Q03161	297 aa	Known RBP	5.21	□□□□□ -1.58
DBF4	YDR052C	SNX41	Q04053	625 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	YDR306C	Q06640	478 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	YPL216W	Q08964	1102 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	YDR061W	Q12298	539 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	GLO4	Q12320	285 aa		5.21	□□□□□ -1.58
DBF4	YDR052C	TRP2	P00899	507 aa	Known RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	ARO3	P14843	370 aa	Known RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	CBS2	P14905	389 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	OM45	P16547	393 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	AAC3	P18238	307 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	CTR86	P25355	563 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	DMC1	P25453	334 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	PGS1	P25578	521 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	NAM9	P27929	486 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	CTS1	P29029	562 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	CAM1	P29547	415 aa	Known RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	CYS4	P32582	507 aa	Known RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	YKL100C	P34248	587 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	BMT2	P38278	337 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	ERG7	P38604	731 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	NEM1	P38757	446 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	YRB2	P40517	327 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	GYP8	P43570	497 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	IDS2	P46958	469 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	TPN1	P53099	579 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	NUT1	P53114	1132 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	MNP1	P53163	194 aa	Predicted RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	YPL068C	Q02749	293 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	SVL3	Q03088	825 aa	Known RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	YET2	Q04210	160 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	YLR297W	Q05899	129 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	SSP2	Q08646	371 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	TY3A-G	Q12173	290 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	DCP1	Q12517	231 aa	Predicted RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	TY3A-I	Q99219	290 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	SCEI	P03882	235 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	MET17	P06106	444 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	HOM2	P13663	365 aa	Known RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	PRP28	P23394	588 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	PET309	P32522	965 aa	Predicted RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	KAP122	P32767	1081 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	YSC84	P32793	468 aa		5.2	□□□□□ -1.58
DBF4	YDR052C	GDH2	P33327	1092 aa	Known RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	YBR238C	P38330	731 aa	Known RBP	5.2	□□□□□ -1.58
DBF4	YDR052C	GND1	P38720	489 aa	Known RBP	5.2	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms