RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PRC1O43663 620 aa20.06■□□□□ 0.8
PHGDH-234ENST00000642041 STX6O43752 255 aa20.06■□□□□ 0.8
PHGDH-234ENST00000642041 SMCR8Q8TEV9 937 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-234ENST00000642041 FOXD4L1Q9NU39 408 aa20.06■□□□□ 0.8
PHGDH-234ENST00000642041 LAMA4Q16363 1823 aa20.06■□□□□ 0.8
PHGDH-234ENST00000642041 DNAH12Q6ZR08 3092 aa20.06■□□□□ 0.8
PHGDH-234ENST00000642041 MROH7-TTC4A0A0A0MT08 1334 aa20.05■□□□□ 0.8
PHGDH-234ENST00000642041 CCDC196A0A1B0GTZ2 297 aa20.05■□□□□ 0.8
PHGDH-234ENST00000642041 PDE4BQ07343 736 aa20.05■□□□□ 0.8
PHGDH-234ENST00000642041 STOX1Q6ZVD7 989 aa20.05■□□□□ 0.8
PHGDH-234ENST00000642041 CCDC83Q8IWF9 413 aa20.05■□□□□ 0.8
PHGDH-234ENST00000642041 LCORLQ8N3X6 602 aa20.05■□□□□ 0.8
PHGDH-234ENST00000642041 FAM184AQ8NB25 1140 aa20.05■□□□□ 0.8
PHGDH-234ENST00000642041 CHGBP05060 677 aa20.04■□□□□ 0.8
PHGDH-234ENST00000642041 COL6A1P12109 1028 aa20.04■□□□□ 0.8
PHGDH-234ENST00000642041 NCLP19338 710 aaKnown RBP20.04■□□□□ 0.8
PHGDH-234ENST00000642041 PLA2G5P39877 138 aa20.04■□□□□ 0.8
PHGDH-234ENST00000642041 PPARAQ07869 468 aa20.04■□□□□ 0.8
PHGDH-234ENST00000642041 HHIPL2Q6UWX4 724 aa20.04■□□□□ 0.8
PHGDH-234ENST00000642041 GADL1Q6ZQY3 521 aa20.04■□□□□ 0.8
PHGDH-234ENST00000642041 NOL8Q76FK4 1167 aaKnown RBP20.04■□□□□ 0.8
PHGDH-234ENST00000642041 SGMS1Q86VZ5 419 aa20.04■□□□□ 0.8
PHGDH-234ENST00000642041 SEMA6BQ9H3T3 888 aa20.04■□□□□ 0.8
PHGDH-234ENST00000642041 CDH23Q9H251 3354 aa20.03■□□□□ 0.8
PHGDH-234ENST00000642041 TNFRSF10AO00220 468 aa20.03■□□□□ 0.8
PHGDH-234ENST00000642041 BAG4O95429 457 aaKnown RBP20.03■□□□□ 0.8
PHGDH-234ENST00000642041 FGRP09769 529 aa20.03■□□□□ 0.8
PHGDH-234ENST00000642041 CPA1P15085 419 aa20.03■□□□□ 0.8
PHGDH-234ENST00000642041 GJB2P29033 226 aa20.03■□□□□ 0.8
PHGDH-234ENST00000642041 SLFNL1Q499Z3 407 aa20.03■□□□□ 0.8
PHGDH-234ENST00000642041 LARP1BQ659C4 914 aaKnown RBP20.03■□□□□ 0.8
PHGDH-234ENST00000642041 IQCA1Q86XH1 822 aa20.03■□□□□ 0.8
PHGDH-234ENST00000642041 ANKRD13CQ8N6S4 541 aa20.03■□□□□ 0.8
PHGDH-234ENST00000642041 RAPGEFL1Q9UHV5 662 aa20.03■□□□□ 0.8
PHGDH-234ENST00000642041 ZHX2Q9Y6X8 837 aa20.03■□□□□ 0.8
PHGDH-234ENST00000642041 GAKO14976 1311 aa20.02■□□□□ 0.8
PHGDH-234ENST00000642041 GPR75-ASB3A0A0A6YYF3 556 aa20.02■□□□□ 0.8
PHGDH-234ENST00000642041 ZSCAN22P10073 491 aaPredicted RBP20.02■□□□□ 0.8
PHGDH-234ENST00000642041 TRIM32Q13049 653 aa20.02■□□□□ 0.8
PHGDH-234ENST00000642041 FAM110CQ1W6H9 321 aa20.02■□□□□ 0.8
PHGDH-234ENST00000642041 ATL3Q6DD88 541 aa20.02■□□□□ 0.8
PHGDH-234ENST00000642041 ZNF384Q8TF68 577 aa20.02■□□□□ 0.8
PHGDH-234ENST00000642041 ZSCAN16Q9H4T2 348 aaPredicted RBP20.02■□□□□ 0.8
PHGDH-234ENST00000642041 GJD2Q9UKL4 321 aa20.02■□□□□ 0.8
PHGDH-234ENST00000642041 ISY1Q9ULR0 285 aaKnown RBP20.02■□□□□ 0.8
PHGDH-234ENST00000642041 AFG3L2Q9Y4W6 797 aa20.02■□□□□ 0.8
PHGDH-234ENST00000642041 CPLX1O14810 134 aa20.01■□□□□ 0.79
PHGDH-234ENST00000642041 ORC4O43929 436 aa20.01■□□□□ 0.79
PHGDH-234ENST00000642041 CALM1P0DP23 149 aa20.01■□□□□ 0.79
PHGDH-234ENST00000642041 CALM2P0DP24 149 aa20.01■□□□□ 0.79
PHGDH-234ENST00000642041 CALM3P0DP25 149 aa20.01■□□□□ 0.79
PHGDH-234ENST00000642041 SYT1P21579 422 aa20.01■□□□□ 0.79
PHGDH-234ENST00000642041 HAND2P61296 217 aa20.01■□□□□ 0.79
PHGDH-234ENST00000642041 DIXDC1Q155Q3 683 aa20.01■□□□□ 0.79
PHGDH-234ENST00000642041 LRRC26Q2I0M4 334 aa20.01■□□□□ 0.79
PHGDH-234ENST00000642041 MIGA1Q8NAN2 632 aa20.01■□□□□ 0.79
PHGDH-234ENST00000642041 SMARCC2Q8TAQ2 1214 aa20.01■□□□□ 0.79
PHGDH-234ENST00000642041 LBHD1Q9BQE6 289 aaPredicted RBP20.01■□□□□ 0.79
PHGDH-234ENST00000642041 PTPRAP18433 802 aa20■□□□□ 0.79
PHGDH-234ENST00000642041 PDIA3P30101 505 aaKnown RBP20■□□□□ 0.79
PHGDH-234ENST00000642041 USP5P45974 858 aa20■□□□□ 0.79
PHGDH-234ENST00000642041 TCP10Q12799 353 aa20■□□□□ 0.79
PHGDH-234ENST00000642041 ADGRA1Q86SQ6 560 aa20■□□□□ 0.79
PHGDH-234ENST00000642041 SCYL3Q8IZE3 742 aa20■□□□□ 0.79
PHGDH-234ENST00000642041 WASF1Q92558 559 aa20■□□□□ 0.79
PHGDH-234ENST00000642041 FAM122AQ96E09 287 aa20■□□□□ 0.79
PHGDH-234ENST00000642041 UBAC1Q9BSL1 405 aa20■□□□□ 0.79
PHGDH-234ENST00000642041 EPB41L4AQ9HCS5 686 aaPredicted RBP20■□□□□ 0.79
PHGDH-234ENST00000642041 PICK1Q9NRD5 415 aa20■□□□□ 0.79
PHGDH-234ENST00000642041 MYH2Q9UKX2 1941 aa20■□□□□ 0.79
PHGDH-234ENST00000642041 CCDC69A6NI79 296 aa19.99■□□□□ 0.79
PHGDH-234ENST00000642041 PHF20L1A8MW92 1017 aa19.99■□□□□ 0.79
PHGDH-234ENST00000642041 MBD3O95983 291 aa19.99■□□□□ 0.79
PHGDH-234ENST00000642041 BTDP43251 543 aa19.99■□□□□ 0.79
PHGDH-234ENST00000642041 TJAP1Q5JTD0 557 aa19.99■□□□□ 0.79
PHGDH-234ENST00000642041 PPP4R3BQ5MIZ7 849 aa19.99■□□□□ 0.79
PHGDH-234ENST00000642041 MAP3K21Q5TCX8 1036 aa19.99■□□□□ 0.79
PHGDH-234ENST00000642041 MYLIPQ8WY64 445 aa19.99■□□□□ 0.79
PHGDH-234ENST00000642041 DCP1AQ9NPI6 582 aaPredicted RBP19.99■□□□□ 0.79
PHGDH-234ENST00000642041 AATFQ9NY61 560 aaKnown RBP eCLIP19.99■□□□□ 0.79
PHGDH-234ENST00000642041 DAGLAQ9Y4D2 1042 aa19.99■□□□□ 0.79
PHGDH-234ENST00000642041 SH2B2O14492 632 aaPredicted RBP19.98■□□□□ 0.79
PHGDH-234ENST00000642041 IFIT3O14879 490 aaKnown RBP19.98■□□□□ 0.79
PHGDH-234ENST00000642041 AGTPBP1Q9UPW5 1226 aa19.98■□□□□ 0.79
PHGDH-234ENST00000642041 SLC12A7Q9Y666 1083 aa19.98■□□□□ 0.79
PHGDH-234ENST00000642041 TAF6LQ9Y6J9 622 aa19.98■□□□□ 0.79
PHGDH-234ENST00000642041 PTPRFP10586 1907 aa19.98■□□□□ 0.79
PHGDH-234ENST00000642041 NCOR1O75376 2440 aa19.97■□□□□ 0.79
PHGDH-234ENST00000642041 MINDY4BA8MYZ0 360 aa19.97■□□□□ 0.79
PHGDH-234ENST00000642041 TRAK2O60296 914 aa19.97■□□□□ 0.79
PHGDH-234ENST00000642041 WTAPQ15007 396 aa19.97■□□□□ 0.79
PHGDH-234ENST00000642041 TMEM67Q5HYA8 995 aa19.97■□□□□ 0.79
PHGDH-234ENST00000642041 IGDCC4Q8TDY8 1250 aa19.97■□□□□ 0.79
PHGDH-234ENST00000642041 TRIB2Q92519 343 aa19.97■□□□□ 0.79
PHGDH-234ENST00000642041 ZSWIM5Q9P217 1185 aa19.97■□□□□ 0.79
PHGDH-234ENST00000642041 PNMA3Q9UL41 463 aa19.97■□□□□ 0.79
PHGDH-234ENST00000642041 KLF18A0A0U1RQI7 1052 aa19.96■□□□□ 0.79
PHGDH-234ENST00000642041 H3BQV1 296 aa19.96■□□□□ 0.79
PHGDH-234ENST00000642041 ZBTB43O43298 467 aa19.96■□□□□ 0.79
PHGDH-234ENST00000642041 F13A1P00488 732 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms