RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 STX6O43752 255 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 CASTP20810 708 aaKnown RBP13.32□□□□□ -0.28
LINC00538-201ENST00000626109 PSMA5P28066 241 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 BTDP43251 543 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 DLGAP5Q15398 846 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 UVSSAQ2YD98 709 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 MCMDC2Q4G0Z9 681 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 ADGRA1Q86SQ6 560 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 MIGA1Q8NAN2 632 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 OSBP2Q969R2 916 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 AIDAQ96BJ3 306 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 L3MBTL3Q96JM7 780 aaPredicted RBP13.32□□□□□ -0.28
LINC00538-201ENST00000626109 ZDHHC15Q96MV8 337 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 IL25Q9H293 177 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 PDRG1Q9NUG6 133 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 LZTS1Q9Y250 596 aa13.32□□□□□ -0.28
LINC00538-201ENST00000626109 FARP1Q9Y4F1 1045 aaPredicted RBP13.32□□□□□ -0.28
LINC00538-201ENST00000626109 CBLBQ13191 982 aa13.31□□□□□ -0.28
LINC00538-201ENST00000626109 CCDC92Q53HC0 331 aaPredicted RBP13.31□□□□□ -0.28
LINC00538-201ENST00000626109 PUS7LQ9H0K6 701 aaKnown RBP13.31□□□□□ -0.28
LINC00538-201ENST00000626109 MYOZ2Q9NPC6 264 aa13.31□□□□□ -0.28
LINC00538-201ENST00000626109 AATFQ9NY61 560 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC00538-201ENST00000626109 GPR75-ASB3A0A0A6YYF3 556 aa13.31□□□□□ -0.28
LINC00538-201ENST00000626109 SHTN1A0MZ66 631 aa13.31□□□□□ -0.28
LINC00538-201ENST00000626109 M0R2C6 588 aa13.31□□□□□ -0.28
LINC00538-201ENST00000626109 TNFRSF10BO14763 440 aa13.31□□□□□ -0.28
LINC00538-201ENST00000626109 MBD4O95243 580 aa13.31□□□□□ -0.28
LINC00538-201ENST00000626109 PLCG2P16885 1265 aa13.31□□□□□ -0.28
LINC00538-201ENST00000626109 UBE2HP62256 183 aa13.31□□□□□ -0.28
LINC00538-201ENST00000626109 TBC1D10BQ4KMP7 808 aaPredicted RBP13.31□□□□□ -0.28
LINC00538-201ENST00000626109 CCDC183Q5T5S1 534 aa13.31□□□□□ -0.28
LINC00538-201ENST00000626109 RNF20Q5VTR2 975 aa13.31□□□□□ -0.28
LINC00538-201ENST00000626109 SEC62Q99442 399 aaKnown RBP13.31□□□□□ -0.28
LINC00538-201ENST00000626109 MYH2Q9UKX2 1941 aa13.31□□□□□ -0.28
LINC00538-201ENST00000626109 IQCA1LA6NCM1 817 aa13.3□□□□□ -0.28
LINC00538-201ENST00000626109 OFD1O75665 1012 aa13.3□□□□□ -0.28
LINC00538-201ENST00000626109 KIF4BQ2VIQ3 1234 aa13.3□□□□□ -0.28
LINC00538-201ENST00000626109 RUFY3Q7L099 469 aa13.3□□□□□ -0.28
LINC00538-201ENST00000626109 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
LINC00538-201ENST00000626109 ZSWIM6Q9HCJ5 1215 aa13.3□□□□□ -0.28
LINC00538-201ENST00000626109 HACL1Q9UJ83 578 aa13.3□□□□□ -0.28
LINC00538-201ENST00000626109 ZMIZ1Q9ULJ6 1067 aa13.3□□□□□ -0.28
LINC00538-201ENST00000626109 ADAMTSL1Q8N6G6 1762 aa13.3□□□□□ -0.28
LINC00538-201ENST00000626109 CCDC171Q6TFL3 1326 aa13.3□□□□□ -0.28
LINC00538-201ENST00000626109 GPAA1O43292 621 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 MYO1BO43795 1136 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 SYT1P21579 422 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 FLT3P36888 993 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 EPS15P42566 896 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 DYNLL1P63167 89 aaKnown RBP13.29□□□□□ -0.28
LINC00538-201ENST00000626109 MAP2K1Q02750 393 aaPredicted RBP13.29□□□□□ -0.28
LINC00538-201ENST00000626109 SIM2Q14190 667 aaPredicted RBP13.29□□□□□ -0.28
LINC00538-201ENST00000626109 ANKRD1Q15327 319 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 APOBEC3HQ6NTF7 200 aaKnown RBP13.29□□□□□ -0.28
LINC00538-201ENST00000626109 ARMC5Q96C12 935 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 AGBL1Q96MI9 1066 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 JAKMIP1Q96N16 626 aaKnown RBP13.29□□□□□ -0.28
LINC00538-201ENST00000626109 RIOK1Q9BRS2 568 aaKnown RBP13.29□□□□□ -0.28
LINC00538-201ENST00000626109 ARMT1Q9H993 441 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
LINC00538-201ENST00000626109 TMEM51Q9NW97 253 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 INTUQ9ULD6 942 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 F13A1P00488 732 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 CAMK2BQ13554 666 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 MRPL58Q14197 206 aaKnown RBP13.29□□□□□ -0.28
LINC00538-201ENST00000626109 CCDC129Q6ZRS4 1044 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 SAMD7Q7Z3H4 446 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 LCORLQ8N3X6 602 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 SLC43A3Q8NBI5 491 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 WDR90Q96KV7 1748 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 CRNKL1Q9BZJ0 848 aaKnown RBP13.29□□□□□ -0.28
LINC00538-201ENST00000626109 ALDH8A1Q9H2A2 487 aaPredicted RBP13.29□□□□□ -0.28
LINC00538-201ENST00000626109 CCSER2Q9H7U1 834 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 GEMIN8Q9NWZ8 242 aaKnown RBP13.29□□□□□ -0.28
LINC00538-201ENST00000626109 TMOD2Q9NZR1 351 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 PCDHAC2Q9Y5I4 1007 aa13.29□□□□□ -0.28
LINC00538-201ENST00000626109 GNAT2P19087 354 aa13.28□□□□□ -0.28
LINC00538-201ENST00000626109 FAM160A1Q05DH4 1040 aa13.28□□□□□ -0.28
LINC00538-201ENST00000626109 PSMD2Q13200 908 aa13.28□□□□□ -0.28
LINC00538-201ENST00000626109 NECTIN1Q15223 517 aa13.28□□□□□ -0.28
LINC00538-201ENST00000626109 ZNF589Q86UQ0 364 aaPredicted RBP13.28□□□□□ -0.28
LINC00538-201ENST00000626109 CHAMP1Q96JM3 812 aa13.28□□□□□ -0.28
LINC00538-201ENST00000626109 PRMT6Q96LA8 375 aaPredicted RBP13.28□□□□□ -0.28
LINC00538-201ENST00000626109 STRBPQ96SI9 672 aaKnown RBP13.28□□□□□ -0.28
LINC00538-201ENST00000626109 BEGAINQ9BUH8 593 aa13.28□□□□□ -0.28
LINC00538-201ENST00000626109 USP40Q9NVE5 1235 aa13.28□□□□□ -0.28
LINC00538-201ENST00000626109 RPAP1Q9BWH6 1393 aaPredicted RBP13.28□□□□□ -0.28
LINC00538-201ENST00000626109 WNT10BO00744 389 aa13.27□□□□□ -0.28
LINC00538-201ENST00000626109 PDCP20941 246 aa13.27□□□□□ -0.28
LINC00538-201ENST00000626109 EPHX2P34913 555 aa13.27□□□□□ -0.28
LINC00538-201ENST00000626109 CCSAPQ6IQ19 270 aaPredicted RBP13.27□□□□□ -0.28
LINC00538-201ENST00000626109 CDC42EP5Q6NZY7 148 aa13.27□□□□□ -0.28
LINC00538-201ENST00000626109 TEX11Q8IYF3 940 aa13.27□□□□□ -0.28
LINC00538-201ENST00000626109 SH3RF3Q8TEJ3 882 aaPredicted RBP13.27□□□□□ -0.28
LINC00538-201ENST00000626109 ZBED3Q96IU2 234 aaPredicted RBP13.27□□□□□ -0.28
LINC00538-201ENST00000626109 ZKSCAN5Q9Y2L8 839 aa13.27□□□□□ -0.28
LINC00538-201ENST00000626109 EGFRP00533 1210 aa13.27□□□□□ -0.29
LINC00538-201ENST00000626109 PTH1RQ03431 593 aa13.27□□□□□ -0.29
LINC00538-201ENST00000626109 TRPM4Q8TD43 1214 aa13.27□□□□□ -0.29
LINC00538-201ENST00000626109 PPM1EQ8WY54 764 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms