RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 MYH8P13535 1937 aa25.18■■□□□ 1.62
SHANK2-220ENST00000608988 PCP11498 1178 aaKnown RBP25.18■■□□□ 1.62
SHANK2-220ENST00000608988 RASGRF1Q13972 1273 aa25.18■■□□□ 1.62
SHANK2-220ENST00000608988 TSR1Q2NL82 804 aaKnown RBP25.18■■□□□ 1.62
SHANK2-220ENST00000608988 NELFBQ8WX92 580 aa25.18■■□□□ 1.62
SHANK2-220ENST00000608988 ZKSCAN3Q9BRR0 538 aa25.18■■□□□ 1.62
SHANK2-220ENST00000608988 FAM107BQ9H098 131 aa25.18■■□□□ 1.62
SHANK2-220ENST00000608988 SUGCTQ9HAC7 445 aa25.18■■□□□ 1.62
SHANK2-220ENST00000608988 TMOD3Q9NYL9 352 aa25.18■■□□□ 1.62
SHANK2-220ENST00000608988 PPFIA4O75335 1185 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 IQCEQ6IPM2 695 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 LRRC31Q6UY01 552 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 SMYD4Q8IYR2 804 aaPredicted RBP25.17■■□□□ 1.62
SHANK2-220ENST00000608988 LCORLQ8N3X6 602 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 VPS54Q9P1Q0 977 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 SAR1BQ9Y6B6 198 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 TNKSO95271 1327 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 MYH2Q9UKX2 1941 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 VGLL3A8MV65 326 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 TRIM66O15016 1216 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 EEF1GP26641 437 aaKnown RBP25.17■■□□□ 1.62
SHANK2-220ENST00000608988 TOM1L2Q6ZVM7 507 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 CATIPQ7Z7H3 387 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 CCDC82Q8N4S0 544 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 VPS16Q9H269 839 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 FAM204AQ9H8W3 233 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 TAB2Q9NYJ8 693 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 TOGARAM1Q9Y4F4 1720 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 DLEC1Q9Y238 1755 aa25.17■■□□□ 1.62
SHANK2-220ENST00000608988 ANO9A1A5B4 782 aa25.16■■□□□ 1.62
SHANK2-220ENST00000608988 RNF40O75150 1001 aa25.16■■□□□ 1.62
SHANK2-220ENST00000608988 SF3B2Q13435 895 aaKnown RBP25.16■■□□□ 1.62
SHANK2-220ENST00000608988 NOC3LQ8WTT2 800 aaKnown RBP25.16■■□□□ 1.62
SHANK2-220ENST00000608988 SHISA4Q96DD7 197 aa25.16■■□□□ 1.62
SHANK2-220ENST00000608988 CARD10Q9BWT7 1032 aa25.16■■□□□ 1.62
SHANK2-220ENST00000608988 CAPN11Q9UMQ6 739 aa25.16■■□□□ 1.62
SHANK2-220ENST00000608988 REXO2Q9Y3B8 237 aaKnown RBP25.16■■□□□ 1.62
SHANK2-220ENST00000608988 FAM205CA6NFA0 338 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 LGALS16A8MUM7 142 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 DDAH1O94760 285 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 PRPF6O94906 941 aaKnown RBP25.15■■□□□ 1.62
SHANK2-220ENST00000608988 CORO7P57737 925 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 ARL6IP4Q66PJ3 421 aaKnown RBP25.15■■□□□ 1.62
SHANK2-220ENST00000608988 TMED8Q6PL24 325 aaPredicted RBP25.15■■□□□ 1.62
SHANK2-220ENST00000608988 DNAJC10Q8IXB1 793 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 HPCAL4Q9UM19 191 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 LUC7L2Q9Y383 392 aaKnown RBP25.15■■□□□ 1.62
SHANK2-220ENST00000608988 ZNF330Q9Y3S2 320 aaPredicted RBP25.15■■□□□ 1.62
SHANK2-220ENST00000608988 PRKAB2O43741 272 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 MYL1P05976 194 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 CASP1P29466 404 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 UBXN1Q04323 297 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 NCAPH2Q6IBW4 605 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 CMTR1Q8N1G2 835 aaKnown RBP25.15■■□□□ 1.62
SHANK2-220ENST00000608988 COG1Q8WTW3 980 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 PPM1EQ8WY54 764 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 THAP9Q9H5L6 903 aa25.15■■□□□ 1.62
SHANK2-220ENST00000608988 TRMT112Q9UI30 125 aaKnown RBP25.15■■□□□ 1.62
SHANK2-220ENST00000608988 COL5A2P05997 1499 aaPredicted RBP25.14■■□□□ 1.62
SHANK2-220ENST00000608988 RPN1P04843 607 aaKnown RBP25.14■■□□□ 1.61
SHANK2-220ENST00000608988 NOP2P46087 812 aaKnown RBP25.14■■□□□ 1.61
SHANK2-220ENST00000608988 PTGDRQ13258 359 aa25.14■■□□□ 1.61
SHANK2-220ENST00000608988 MEA1Q16626 185 aa25.14■■□□□ 1.61
SHANK2-220ENST00000608988 WWC2Q6AWC2 1192 aa25.14■■□□□ 1.61
SHANK2-220ENST00000608988 SYNE4Q8N205 404 aa25.14■■□□□ 1.61
SHANK2-220ENST00000608988 MB21D1Q8N884 522 aa25.14■■□□□ 1.61
SHANK2-220ENST00000608988 RETREG2Q8NC44 543 aa25.14■■□□□ 1.61
SHANK2-220ENST00000608988 ZSCAN10Q96SZ4 725 aaPredicted RBP25.14■■□□□ 1.61
SHANK2-220ENST00000608988 NUP58Q9BVL2 599 aa25.14■■□□□ 1.61
SHANK2-220ENST00000608988 ERVV-1B6SEH8 477 aa25.13■■□□□ 1.61
SHANK2-220ENST00000608988 RNF225M0QZC1 329 aaPredicted RBP25.13■■□□□ 1.61
SHANK2-220ENST00000608988 KRT86O43790 486 aa25.13■■□□□ 1.61
SHANK2-220ENST00000608988 SYF2O95926 243 aaKnown RBP25.13■■□□□ 1.61
SHANK2-220ENST00000608988 ABL1P00519 1130 aa25.13■■□□□ 1.61
SHANK2-220ENST00000608988 LONP1P36776 959 aaKnown RBP25.13■■□□□ 1.61
SHANK2-220ENST00000608988 ZNF174Q15697 407 aa25.13■■□□□ 1.61
SHANK2-220ENST00000608988 EARS2Q5JPH6 523 aaKnown RBP25.13■■□□□ 1.61
SHANK2-220ENST00000608988 GUCA1BQ9UMX6 200 aa25.13■■□□□ 1.61
SHANK2-220ENST00000608988 MYH13Q9UKX3 1938 aa25.13■■□□□ 1.61
SHANK2-220ENST00000608988 PDS5AQ29RF7 1337 aaKnown RBP25.13■■□□□ 1.61
SHANK2-220ENST00000608988 PARP1P09874 1014 aaKnown RBP25.13■■□□□ 1.61
SHANK2-220ENST00000608988 CYLC1P35663 651 aaPredicted RBP25.13■■□□□ 1.61
SHANK2-220ENST00000608988 STIM1Q13586 685 aa25.13■■□□□ 1.61
SHANK2-220ENST00000608988 KCNB1Q14721 858 aa25.13■■□□□ 1.61
SHANK2-220ENST00000608988 HLFQ16534 295 aa25.13■■□□□ 1.61
SHANK2-220ENST00000608988 CCDC170Q8IYT3 715 aa25.13■■□□□ 1.61
SHANK2-220ENST00000608988 DUOX1Q9NRD9 1551 aa25.12■■□□□ 1.61
SHANK2-220ENST00000608988 RREB1Q92766 1687 aa25.12■■□□□ 1.61
SHANK2-220ENST00000608988 EIF3CLB5ME19 914 aaKnown RBP25.12■■□□□ 1.61
SHANK2-220ENST00000608988 GPTP24298 496 aa25.12■■□□□ 1.61
SHANK2-220ENST00000608988 IQCDQ96DY2 449 aa25.12■■□□□ 1.61
SHANK2-220ENST00000608988 EIF3CQ99613 913 aaKnown RBP25.12■■□□□ 1.61
SHANK2-220ENST00000608988 SHOX2O60902 331 aaPredicted RBP25.11■■□□□ 1.61
SHANK2-220ENST00000608988 HSPA2P54652 639 aa25.11■■□□□ 1.61
SHANK2-220ENST00000608988 NPY5RQ15761 445 aa25.11■■□□□ 1.61
SHANK2-220ENST00000608988 TTC31Q49AM3 519 aaPredicted RBP25.11■■□□□ 1.61
SHANK2-220ENST00000608988 CCDC70Q6NSX1 233 aa25.11■■□□□ 1.61
SHANK2-220ENST00000608988 TMTC3Q6ZXV5 915 aa25.11■■□□□ 1.61
SHANK2-220ENST00000608988 EFCAB13Q8IY85 973 aa25.11■■□□□ 1.61
SHANK2-220ENST00000608988 ADSSL1Q8N142 457 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms