RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 SNCAIPQ9Y6H5 919 aa21.56■■□□□ 1.04
SSBP4-212ENST00000601919 ZHX2Q9Y6X8 837 aa21.56■■□□□ 1.04
SSBP4-212ENST00000601919 PHIPQ8WWQ0 1821 aa21.56■■□□□ 1.04
SSBP4-212ENST00000601919 C19orf81C9J6K1 198 aa21.55■■□□□ 1.04
SSBP4-212ENST00000601919 PLEKHA8P1O95397 391 aa21.55■■□□□ 1.04
SSBP4-212ENST00000601919 DEXIO95424 95 aa21.55■■□□□ 1.04
SSBP4-212ENST00000601919 DDIT3P35638 169 aa21.55■■□□□ 1.04
SSBP4-212ENST00000601919 NUCB2P80303 420 aa21.55■■□□□ 1.04
SSBP4-212ENST00000601919 STAG2Q8N3U4 1231 aa21.55■■□□□ 1.04
SSBP4-212ENST00000601919 RBM46Q8TBY0 533 aaKnown RBP21.55■■□□□ 1.04
SSBP4-212ENST00000601919 PHKBQ93100 1093 aa21.55■■□□□ 1.04
SSBP4-212ENST00000601919 SPZ1Q9BXG8 430 aa21.55■■□□□ 1.04
SSBP4-212ENST00000601919 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.55■■□□□ 1.04
SSBP4-212ENST00000601919 PRPF3O43395 683 aaKnown RBP21.54■■□□□ 1.04
SSBP4-212ENST00000601919 CELF2O95319 508 aaKnown RBP21.54■■□□□ 1.04
SSBP4-212ENST00000601919 BMP3P12645 472 aa21.54■■□□□ 1.04
SSBP4-212ENST00000601919 BACE1P56817 501 aa21.54■■□□□ 1.04
SSBP4-212ENST00000601919 SPP2Q13103 211 aa21.54■■□□□ 1.04
SSBP4-212ENST00000601919 LARP1BQ659C4 914 aaKnown RBP21.54■■□□□ 1.04
SSBP4-212ENST00000601919 NBPF11Q86T75 865 aa21.54■■□□□ 1.04
SSBP4-212ENST00000601919 ERO1BQ86YB8 467 aa21.54■■□□□ 1.04
SSBP4-212ENST00000601919 CCDC82Q8N4S0 544 aa21.54■■□□□ 1.04
SSBP4-212ENST00000601919 SRBD1Q8N5C6 995 aaKnown RBP21.54■■□□□ 1.04
SSBP4-212ENST00000601919 RGS22Q8NE09 1264 aa21.54■■□□□ 1.04
SSBP4-212ENST00000601919 GBA2Q9HCG7 927 aaPredicted RBP21.54■■□□□ 1.04
SSBP4-212ENST00000601919 GPCPD1Q9NPB8 672 aa21.54■■□□□ 1.04
SSBP4-212ENST00000601919 FRMPD2Q68DX3 1309 aaPredicted RBP21.54■■□□□ 1.04
SSBP4-212ENST00000601919 CNTNAP5Q8WYK1 1306 aa21.54■■□□□ 1.04
SSBP4-212ENST00000601919 ITGBL1O95965 494 aaPredicted RBP21.53■■□□□ 1.04
SSBP4-212ENST00000601919 GOLGA8HP0CJ92 632 aa21.53■■□□□ 1.04
SSBP4-212ENST00000601919 PPATQ06203 517 aa21.53■■□□□ 1.04
SSBP4-212ENST00000601919 FUT2Q10981 343 aa21.53■■□□□ 1.04
SSBP4-212ENST00000601919 LDLRAD1Q5T700 205 aa21.53■■□□□ 1.04
SSBP4-212ENST00000601919 CCDC84Q86UT8 332 aaPredicted RBP21.53■■□□□ 1.04
SSBP4-212ENST00000601919 CMTR1Q8N1G2 835 aaKnown RBP21.53■■□□□ 1.04
SSBP4-212ENST00000601919 FDPSP14324 419 aaKnown RBP21.52■■□□□ 1.04
SSBP4-212ENST00000601919 XBP1P17861 261 aa21.52■■□□□ 1.04
SSBP4-212ENST00000601919 MTMR2Q13614 643 aa21.52■■□□□ 1.04
SSBP4-212ENST00000601919 ZYXQ15942 572 aaKnown RBP21.52■■□□□ 1.04
SSBP4-212ENST00000601919 KCTD1Q719H9 257 aa21.52■■□□□ 1.04
SSBP4-212ENST00000601919 SMC1BQ8NDV3 1235 aa21.52■■□□□ 1.04
SSBP4-212ENST00000601919 ELP3Q9H9T3 547 aa21.52■■□□□ 1.04
SSBP4-212ENST00000601919 AFG3L2Q9Y4W6 797 aa21.52■■□□□ 1.04
SSBP4-212ENST00000601919 V9GY48 417 aaPredicted RBP21.52■■□□□ 1.04
SSBP4-212ENST00000601919 SPDYE5A6NIY4 337 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 TRIM75PA6NK02 468 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 UBE2Q2LH0YL09 131 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 H3BQV1 296 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 WDR46O15213 610 aaKnown RBP21.51■■□□□ 1.03
SSBP4-212ENST00000601919 SYT1P21579 422 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 IKQ13123 557 aaPredicted RBP21.51■■□□□ 1.03
SSBP4-212ENST00000601919 TRIM29Q14134 588 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 IFFO2Q5TF58 517 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 MOB2Q70IA6 237 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 SPICE1Q8N0Z3 855 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 CHURC1Q8WUH1 139 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 SLC10A4Q96EP9 437 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 RRP36Q96EU6 259 aaKnown RBP21.51■■□□□ 1.03
SSBP4-212ENST00000601919 ALG1Q9BT22 464 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 RIOX1Q9H6W3 641 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 TMOD4Q9NZQ9 345 aa21.51■■□□□ 1.03
SSBP4-212ENST00000601919 SEC63Q9UGP8 760 aaKnown RBP21.51■■□□□ 1.03
SSBP4-212ENST00000601919 WDR33Q9C0J8 1336 aaKnown RBP21.51■■□□□ 1.03
SSBP4-212ENST00000601919 KIF3CO14782 793 aa21.5■■□□□ 1.03
SSBP4-212ENST00000601919 STX6O43752 255 aa21.5■■□□□ 1.03
SSBP4-212ENST00000601919 PLA2G6O60733 806 aa21.5■■□□□ 1.03
SSBP4-212ENST00000601919 PPFIA3O75145 1194 aa21.5■■□□□ 1.03
SSBP4-212ENST00000601919 STAT2P52630 851 aa21.5■■□□□ 1.03
SSBP4-212ENST00000601919 RASGRP2Q7LDG7 609 aa21.5■■□□□ 1.03
SSBP4-212ENST00000601919 FAM160B2Q86V87 743 aa21.5■■□□□ 1.03
SSBP4-212ENST00000601919 C8orf76Q96K31 380 aa21.5■■□□□ 1.03
SSBP4-212ENST00000601919 C12orf42Q96LP6 360 aa21.5■■□□□ 1.03
SSBP4-212ENST00000601919 FEM1BQ9UK73 627 aa21.5■■□□□ 1.03
SSBP4-212ENST00000601919 BAZ2BQ9UIF8 2168 aaKnown RBP21.5■■□□□ 1.03
SSBP4-212ENST00000601919 TMEM232C9JQI7 657 aa21.49■■□□□ 1.03
SSBP4-212ENST00000601919 PPIL2Q13356 520 aa21.49■■□□□ 1.03
SSBP4-212ENST00000601919 FAM83BQ5T0W9 1011 aa21.49■■□□□ 1.03
SSBP4-212ENST00000601919 BTNL9Q6UXG8 535 aa21.49■■□□□ 1.03
SSBP4-212ENST00000601919 CLMNQ96JQ2 1002 aa21.49■■□□□ 1.03
SSBP4-212ENST00000601919 UBA5Q9GZZ9 404 aa21.49■■□□□ 1.03
SSBP4-212ENST00000601919 CXCL11O14625 94 aa21.48■■□□□ 1.03
SSBP4-212ENST00000601919 CYTH3O43739 400 aa21.48■■□□□ 1.03
SSBP4-212ENST00000601919 SCG2P13521 617 aa21.48■■□□□ 1.03
SSBP4-212ENST00000601919 YY1P25490 414 aa21.48■■□□□ 1.03
SSBP4-212ENST00000601919 FMR1Q06787 632 aaKnown RBP eCLIP21.48■■□□□ 1.03
SSBP4-212ENST00000601919 PFKFB3Q16875 520 aaPredicted RBP21.48■■□□□ 1.03
SSBP4-212ENST00000601919 SH3D19Q5HYK7 790 aa21.48■■□□□ 1.03
SSBP4-212ENST00000601919 FAM177A1Q8N128 213 aaPredicted RBP21.48■■□□□ 1.03
SSBP4-212ENST00000601919 OTUD5Q96G74 571 aa21.48■■□□□ 1.03
SSBP4-212ENST00000601919 NUP88Q99567 741 aaPredicted RBP21.48■■□□□ 1.03
SSBP4-212ENST00000601919 EMILIN3Q9NT22 766 aa21.48■■□□□ 1.03
SSBP4-212ENST00000601919 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.48■■□□□ 1.03
SSBP4-212ENST00000601919 PTPRFP10586 1907 aa21.47■■□□□ 1.03
SSBP4-212ENST00000601919 VPS37CA5D8V6 355 aaPredicted RBP21.47■■□□□ 1.03
SSBP4-212ENST00000601919 DTNBO60941 627 aa21.47■■□□□ 1.03
SSBP4-212ENST00000601919 TOMM70O94826 608 aa21.47■■□□□ 1.03
SSBP4-212ENST00000601919 KIAA1755Q5JYT7 1200 aa21.47■■□□□ 1.03
SSBP4-212ENST00000601919 SYDE2Q5VT97 1194 aa21.47■■□□□ 1.03
SSBP4-212ENST00000601919 TTBK2Q6IQ55 1244 aa21.47■■□□□ 1.03
SSBP4-212ENST00000601919 ADGRF4Q8IZF3 695 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms