RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 LARP1BQ659C4 914 aaKnown RBP16.3■□□□□ 0.2
NLE1-205ENST00000588642 KCTD1Q719H9 257 aa16.3■□□□□ 0.2
NLE1-205ENST00000588642 SPICE1Q8N0Z3 855 aa16.3■□□□□ 0.2
NLE1-205ENST00000588642 ZNF280CQ8ND82 737 aa16.3■□□□□ 0.2
NLE1-205ENST00000588642 GMCL1Q96IK5 515 aa16.3■□□□□ 0.2
NLE1-205ENST00000588642 CLMNQ96JQ2 1002 aa16.3■□□□□ 0.2
NLE1-205ENST00000588642 UBA5Q9GZZ9 404 aa16.3■□□□□ 0.2
NLE1-205ENST00000588642 KIAA1683Q9H0B3 1180 aa16.3■□□□□ 0.2
NLE1-205ENST00000588642 ELP3Q9H9T3 547 aa16.3■□□□□ 0.2
NLE1-205ENST00000588642 GBA2Q9HCG7 927 aaPredicted RBP16.3■□□□□ 0.2
NLE1-205ENST00000588642 CHMP5Q9NZZ3 219 aa16.3■□□□□ 0.2
NLE1-205ENST00000588642 V9GY48 417 aaPredicted RBP16.3■□□□□ 0.2
NLE1-205ENST00000588642 TRIM75PA6NK02 468 aa16.29■□□□□ 0.2
NLE1-205ENST00000588642 PRPF3O43395 683 aaKnown RBP16.29■□□□□ 0.2
NLE1-205ENST00000588642 FDPSP14324 419 aaKnown RBP16.29■□□□□ 0.2
NLE1-205ENST00000588642 DDIT3P35638 169 aa16.29■□□□□ 0.2
NLE1-205ENST00000588642 USP14P54578 494 aa16.29■□□□□ 0.2
NLE1-205ENST00000588642 FKBP1BP68106 108 aa16.29■□□□□ 0.2
NLE1-205ENST00000588642 FUT2Q10981 343 aa16.29■□□□□ 0.2
NLE1-205ENST00000588642 KIAA1755Q5JYT7 1200 aa16.29■□□□□ 0.2
NLE1-205ENST00000588642 LDLRAD1Q5T700 205 aa16.29■□□□□ 0.2
NLE1-205ENST00000588642 NBPF11Q86T75 865 aa16.29■□□□□ 0.2
NLE1-205ENST00000588642 PIBF1Q8WXW3 757 aa16.29■□□□□ 0.2
NLE1-205ENST00000588642 WASF1Q92558 559 aa16.29■□□□□ 0.2
NLE1-205ENST00000588642 SLC10A4Q96EP9 437 aa16.29■□□□□ 0.2
NLE1-205ENST00000588642 NUP88Q99567 741 aaPredicted RBP16.29■□□□□ 0.2
NLE1-205ENST00000588642 VAT1LQ9HCJ6 419 aa16.29■□□□□ 0.2
NLE1-205ENST00000588642 CIZ1Q9ULV3 898 aaPredicted RBP16.29■□□□□ 0.2
NLE1-205ENST00000588642 POLR2AP24928 1970 aaKnown RBP16.28■□□□□ 0.2
NLE1-205ENST00000588642 KIF3CO14782 793 aa16.28■□□□□ 0.2
NLE1-205ENST00000588642 SMARCA1P28370 1054 aa16.28■□□□□ 0.2
NLE1-205ENST00000588642 FOSBP53539 338 aa16.28■□□□□ 0.2
NLE1-205ENST00000588642 BACE1P56817 501 aa16.28■□□□□ 0.2
NLE1-205ENST00000588642 IKQ13123 557 aaPredicted RBP16.28■□□□□ 0.2
NLE1-205ENST00000588642 MTMR2Q13614 643 aa16.28■□□□□ 0.2
NLE1-205ENST00000588642 TTBK2Q6IQ55 1244 aa16.28■□□□□ 0.2
NLE1-205ENST00000588642 ERO1BQ86YB8 467 aa16.28■□□□□ 0.2
NLE1-205ENST00000588642 RNF26Q9BY78 433 aaPredicted RBP16.28■□□□□ 0.2
NLE1-205ENST00000588642 CPVLQ9H3G5 476 aa16.28■□□□□ 0.2
NLE1-205ENST00000588642 GREB1LQ9C091 1923 aaPredicted RBP16.27■□□□□ 0.2
NLE1-205ENST00000588642 STK36Q9NRP7 1315 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 hCG_1642624A0A1W2PR95 340 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 UNCXA6NJT0 531 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 C19orf81C9J6K1 198 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 TMEM232C9JQI7 657 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 DEXIO95424 95 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 SYT1P21579 422 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 YY1P25490 414 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 SLC16A2P36021 539 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 NUCB2P80303 420 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 FAM83BQ5T0W9 1011 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 LPAR1Q92633 364 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 ALG1Q9BT22 464 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 SPZ1Q9BXG8 430 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 RBM27Q9P2N5 1060 aaKnown RBP16.27■□□□□ 0.2
NLE1-205ENST00000588642 AFG3L2Q9Y4W6 797 aa16.27■□□□□ 0.2
NLE1-205ENST00000588642 MYH8P13535 1937 aa16.27■□□□□ 0.19
NLE1-205ENST00000588642 CNTNAP5Q8WYK1 1306 aa16.26■□□□□ 0.19
NLE1-205ENST00000588642 H3BQV1 296 aa16.26■□□□□ 0.19
NLE1-205ENST00000588642 PPATQ06203 517 aa16.26■□□□□ 0.19
NLE1-205ENST00000588642 SLC35G1Q2M3R5 365 aa16.26■□□□□ 0.19
NLE1-205ENST00000588642 IFFO2Q5TF58 517 aa16.26■□□□□ 0.19
NLE1-205ENST00000588642 SMC1BQ8NDV3 1235 aa16.26■□□□□ 0.19
NLE1-205ENST00000588642 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
NLE1-205ENST00000588642 CHURC1Q8WUH1 139 aa16.26■□□□□ 0.19
NLE1-205ENST00000588642 RRP36Q96EU6 259 aaKnown RBP16.26■□□□□ 0.19
NLE1-205ENST00000588642 OTUD5Q96G74 571 aa16.26■□□□□ 0.19
NLE1-205ENST00000588642 C8orf76Q96K31 380 aa16.26■□□□□ 0.19
NLE1-205ENST00000588642 EMILIN3Q9NT22 766 aa16.26■□□□□ 0.19
NLE1-205ENST00000588642 TMOD4Q9NZQ9 345 aa16.26■□□□□ 0.19
NLE1-205ENST00000588642 VPS37CA5D8V6 355 aaPredicted RBP16.25■□□□□ 0.19
NLE1-205ENST00000588642 SPDYE5A6NIY4 337 aa16.25■□□□□ 0.19
NLE1-205ENST00000588642 WDR46O15213 610 aaKnown RBP16.25■□□□□ 0.19
NLE1-205ENST00000588642 CYTH3O43739 400 aa16.25■□□□□ 0.19
NLE1-205ENST00000588642 STX6O43752 255 aa16.25■□□□□ 0.19
NLE1-205ENST00000588642 PDIA4P13667 645 aaKnown RBP16.25■□□□□ 0.19
NLE1-205ENST00000588642 HMGCS2P54868 508 aa16.25■□□□□ 0.19
NLE1-205ENST00000588642 TRIM29Q14134 588 aa16.25■□□□□ 0.19
NLE1-205ENST00000588642 CST9Q5W186 159 aa16.25■□□□□ 0.19
NLE1-205ENST00000588642 HOMER1Q86YM7 354 aa16.25■□□□□ 0.19
NLE1-205ENST00000588642 ADGRF4Q8IZF3 695 aa16.25■□□□□ 0.19
NLE1-205ENST00000588642 AIFM3Q96NN9 605 aa16.25■□□□□ 0.19
NLE1-205ENST00000588642 RIOX1Q9H6W3 641 aa16.25■□□□□ 0.19
NLE1-205ENST00000588642 CXCL11O14625 94 aa16.24■□□□□ 0.19
NLE1-205ENST00000588642 PPIL2Q13356 520 aa16.24■□□□□ 0.19
NLE1-205ENST00000588642 DGKZQ13574 1117 aa16.24■□□□□ 0.19
NLE1-205ENST00000588642 PKN1Q16512 942 aa16.24■□□□□ 0.19
NLE1-205ENST00000588642 SYDE2Q5VT97 1194 aa16.24■□□□□ 0.19
NLE1-205ENST00000588642 FOXD4L5Q5VV16 416 aaPredicted RBP16.24■□□□□ 0.19
NLE1-205ENST00000588642 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
NLE1-205ENST00000588642 BTNL9Q6UXG8 535 aa16.24■□□□□ 0.19
NLE1-205ENST00000588642 FOXD4L4Q8WXT5 416 aaPredicted RBP16.24■□□□□ 0.19
NLE1-205ENST00000588642 OPTNQ96CV9 577 aa16.24■□□□□ 0.19
NLE1-205ENST00000588642 PIGSQ96S52 555 aa16.24■□□□□ 0.19
NLE1-205ENST00000588642 JMJD4Q9H9V9 463 aa16.24■□□□□ 0.19
NLE1-205ENST00000588642 SEC63Q9UGP8 760 aaKnown RBP16.24■□□□□ 0.19
NLE1-205ENST00000588642 FEM1BQ9UK73 627 aa16.24■□□□□ 0.19
NLE1-205ENST00000588642 WDR33Q9C0J8 1336 aaKnown RBP16.23■□□□□ 0.19
NLE1-205ENST00000588642 IRF6O14896 467 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms