RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 TAF6LQ9Y6J9 622 aa14.29□□□□□ -0.12
USP8-212ENST00000560730 HTTP42858 3142 aa14.29□□□□□ -0.12
USP8-212ENST00000560730 B4E1Z4 1266 aa14.28□□□□□ -0.12
USP8-212ENST00000560730 CYP21A2P08686 494 aa14.28□□□□□ -0.12
USP8-212ENST00000560730 FLT3LGP49771 235 aa14.28□□□□□ -0.12
USP8-212ENST00000560730 SLFN13Q68D06 897 aa14.28□□□□□ -0.12
USP8-212ENST00000560730 RCSD1Q6JBY9 416 aa14.28□□□□□ -0.12
USP8-212ENST00000560730 GMCL1P1Q8NEA9 526 aa14.28□□□□□ -0.12
USP8-212ENST00000560730 MAP4K1Q92918 833 aa14.28□□□□□ -0.12
USP8-212ENST00000560730 TCP11L1Q9NUJ3 509 aa14.28□□□□□ -0.12
USP8-212ENST00000560730 GJD2Q9UKL4 321 aa14.28□□□□□ -0.12
USP8-212ENST00000560730 ZNFX1Q9P2E3 1918 aaKnown RBP14.28□□□□□ -0.12
USP8-212ENST00000560730 KDM4AO75164 1064 aa14.27□□□□□ -0.12
USP8-212ENST00000560730 PCP11498 1178 aaKnown RBP14.27□□□□□ -0.12
USP8-212ENST00000560730 PRMT2P55345 433 aa14.27□□□□□ -0.12
USP8-212ENST00000560730 SH3TC2Q8TF17 1288 aa14.27□□□□□ -0.12
USP8-212ENST00000560730 COA7Q96BR5 231 aa14.27□□□□□ -0.12
USP8-212ENST00000560730 ZKSCAN3Q9BRR0 538 aa14.27□□□□□ -0.12
USP8-212ENST00000560730 LSG1Q9H089 658 aaKnown RBP14.27□□□□□ -0.12
USP8-212ENST00000560730 SYNPO2Q9UMS6 1093 aa14.27□□□□□ -0.12
USP8-212ENST00000560730 ADAMTS5Q9UNA0 930 aa14.27□□□□□ -0.12
USP8-212ENST00000560730 U3KPZ7 1027 aaPredicted RBP14.27□□□□□ -0.12
USP8-212ENST00000560730 MCCP23508 829 aa14.26□□□□□ -0.13
USP8-212ENST00000560730 SLC9C1Q4G0N8 1177 aa14.26□□□□□ -0.13
USP8-212ENST00000560730 RAET1EQ8TD07 263 aa14.26□□□□□ -0.13
USP8-212ENST00000560730 ESR2Q92731 530 aa14.26□□□□□ -0.13
USP8-212ENST00000560730 ARMC5Q96C12 935 aa14.26□□□□□ -0.13
USP8-212ENST00000560730 TMEM47Q9BQJ4 181 aa14.26□□□□□ -0.13
USP8-212ENST00000560730 ZSWIM5Q9P217 1185 aa14.26□□□□□ -0.13
USP8-212ENST00000560730 PPP1R9AQ9ULJ8 1098 aa14.26□□□□□ -0.13
USP8-212ENST00000560730 MTMR7Q9Y216 660 aa14.26□□□□□ -0.13
USP8-212ENST00000560730 RBM8AQ9Y5S9 174 aaKnown RBP14.26□□□□□ -0.13
USP8-212ENST00000560730 VWA5AO00534 786 aa14.25□□□□□ -0.13
USP8-212ENST00000560730 ELNP15502 786 aa14.25□□□□□ -0.13
USP8-212ENST00000560730 MAPK4P31152 587 aa14.25□□□□□ -0.13
USP8-212ENST00000560730 TMEM132BQ14DG7 1078 aa14.25□□□□□ -0.13
USP8-212ENST00000560730 PPP4R3BQ5MIZ7 849 aa14.25□□□□□ -0.13
USP8-212ENST00000560730 GPR142Q7Z601 462 aa14.25□□□□□ -0.13
USP8-212ENST00000560730 MB21D1Q8N884 522 aa14.25□□□□□ -0.13
USP8-212ENST00000560730 REPS2Q8NFH8 660 aa14.25□□□□□ -0.13
USP8-212ENST00000560730 SLF1Q9BQI6 1058 aa14.25□□□□□ -0.13
USP8-212ENST00000560730 MOV10L1Q9BXT6 1211 aaKnown RBP14.25□□□□□ -0.13
USP8-212ENST00000560730 SPATC1LQ9H0A9 340 aa14.25□□□□□ -0.13
USP8-212ENST00000560730 SMCHD1A6NHR9 2005 aa14.25□□□□□ -0.13
USP8-212ENST00000560730 ADCY3O60266 1144 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 CDC45O75419 566 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 MYCP01106 439 aaPredicted RBP14.24□□□□□ -0.13
USP8-212ENST00000560730 TOP1P11387 765 aaKnown RBP14.24□□□□□ -0.13
USP8-212ENST00000560730 BMP3P12645 472 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 GRK4P32298 578 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 SOX10P56693 466 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 CCNA1P78396 465 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 PLS1Q14651 629 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 KIAA1211Q6ZU35 1233 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 STOX1Q6ZVD7 989 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 CYB5R4Q7L1T6 521 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 PLEKHH3Q7Z736 793 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 CCAR1Q8IX12 1150 aaKnown RBP14.24□□□□□ -0.13
USP8-212ENST00000560730 GMCL1Q96IK5 515 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 ZNF333Q96JL9 665 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 TMEM232C9JQI7 657 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 SLC1A4P43007 532 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 IRF5Q13568 498 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 MORN1Q5T089 497 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 WDR78Q5VTH9 848 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 KCTD1Q719H9 257 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 PRPF38AQ8NAV1 312 aaKnown RBP14.24□□□□□ -0.13
USP8-212ENST00000560730 USP6NLQ92738 828 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 KIFC2Q96AC6 838 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 TTC14Q96N46 770 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 KRT23Q9C075 422 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 CNNM2Q9H8M5 875 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 ANO2Q9NQ90 1003 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 FEM1BQ9UK73 627 aa14.24□□□□□ -0.13
USP8-212ENST00000560730 ISY1Q9ULR0 285 aaKnown RBP14.24□□□□□ -0.13
USP8-212ENST00000560730 E7EWF7 191 aa14.23□□□□□ -0.13
USP8-212ENST00000560730 ERCC3P19447 782 aa14.23□□□□□ -0.13
USP8-212ENST00000560730 CYP2B6P20813 491 aa14.23□□□□□ -0.13
USP8-212ENST00000560730 COL9A3Q14050 684 aaPredicted RBP14.23□□□□□ -0.13
USP8-212ENST00000560730 TTBK2Q6IQ55 1244 aa14.23□□□□□ -0.13
USP8-212ENST00000560730 NBPF11Q86T75 865 aa14.23□□□□□ -0.13
USP8-212ENST00000560730 ENAHQ8N8S7 591 aaPredicted RBP14.23□□□□□ -0.13
USP8-212ENST00000560730 ZSCAN10Q96SZ4 725 aaPredicted RBP14.23□□□□□ -0.13
USP8-212ENST00000560730 ZNF214Q9UL59 606 aaPredicted RBP14.23□□□□□ -0.13
USP8-212ENST00000560730 PTPREP23469 700 aa14.22□□□□□ -0.13
USP8-212ENST00000560730 HOXD11P31277 338 aaPredicted RBP14.22□□□□□ -0.13
USP8-212ENST00000560730 STAT3P40763 770 aa14.22□□□□□ -0.13
USP8-212ENST00000560730 NECTIN1Q15223 517 aa14.22□□□□□ -0.13
USP8-212ENST00000560730 MTFR1Q15390 333 aa14.22□□□□□ -0.13
USP8-212ENST00000560730 IQCA1Q86XH1 822 aa14.22□□□□□ -0.13
USP8-212ENST00000560730 DGKHQ86XP1 1220 aa14.22□□□□□ -0.13
USP8-212ENST00000560730 SLAIN1Q8ND83 568 aa14.22□□□□□ -0.13
USP8-212ENST00000560730 SHCBP1Q8NEM2 672 aa14.22□□□□□ -0.13
USP8-212ENST00000560730 ANKS1AQ92625 1134 aa14.22□□□□□ -0.13
USP8-212ENST00000560730 NUDT12Q9BQG2 462 aa14.22□□□□□ -0.13
USP8-212ENST00000560730 CWC22Q9HCG8 908 aaKnown RBP14.22□□□□□ -0.13
USP8-212ENST00000560730 BIN2Q9UBW5 565 aaPredicted RBP14.22□□□□□ -0.13
USP8-212ENST00000560730 CENPFP49454 3210 aa14.22□□□□□ -0.13
USP8-212ENST00000560730 POTEFA5A3E0 1075 aa14.21□□□□□ -0.13
USP8-212ENST00000560730 SLC15A5A6NIM6 579 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms