RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 CCDC102BQ68D86 513 aa16.77■□□□□ 0.28
SNRPF-203ENST00000551316 TEX11Q8IYF3 940 aa16.77■□□□□ 0.28
SNRPF-203ENST00000551316 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.77■□□□□ 0.28
SNRPF-203ENST00000551316 ARNTL2Q8WYA1 636 aa16.77■□□□□ 0.28
SNRPF-203ENST00000551316 SIP14410 1827 aa16.77■□□□□ 0.27
SNRPF-203ENST00000551316 DMXL1Q9Y485 3027 aa16.77■□□□□ 0.27
SNRPF-203ENST00000551316 SEMA3EO15041 775 aa16.76■□□□□ 0.27
SNRPF-203ENST00000551316 RGS20O76081 388 aa16.76■□□□□ 0.27
SNRPF-203ENST00000551316 SSTR3P32745 418 aaPredicted RBP16.76■□□□□ 0.27
SNRPF-203ENST00000551316 CCL23P55773 120 aa16.76■□□□□ 0.27
SNRPF-203ENST00000551316 IER5LQ5T953 404 aa16.76■□□□□ 0.27
SNRPF-203ENST00000551316 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
SNRPF-203ENST00000551316 METTL16Q86W50 562 aaKnown RBP16.76■□□□□ 0.27
SNRPF-203ENST00000551316 FEZ1Q99689 392 aa16.76■□□□□ 0.27
SNRPF-203ENST00000551316 SPATC1LQ9H0A9 340 aa16.76■□□□□ 0.27
SNRPF-203ENST00000551316 RPAP3Q9H6T3 665 aaPredicted RBP16.76■□□□□ 0.27
SNRPF-203ENST00000551316 FAM86C1Q9NVL1 165 aa16.76■□□□□ 0.27
SNRPF-203ENST00000551316 CACNA1HO95180 2353 aa16.75■□□□□ 0.27
SNRPF-203ENST00000551316 COL4A6Q14031 1691 aa16.75■□□□□ 0.27
SNRPF-203ENST00000551316 POTEB3A0JP26 581 aa16.75■□□□□ 0.27
SNRPF-203ENST00000551316 CD4P01730 458 aa16.75■□□□□ 0.27
SNRPF-203ENST00000551316 PGK2P07205 417 aa16.75■□□□□ 0.27
SNRPF-203ENST00000551316 TAP1Q03518 808 aa16.75■□□□□ 0.27
SNRPF-203ENST00000551316 POTEBQ6S5H4 581 aa16.75■□□□□ 0.27
SNRPF-203ENST00000551316 MAPKAPK5Q8IW41 473 aa16.75■□□□□ 0.27
SNRPF-203ENST00000551316 NSUN4Q96CB9 384 aaKnown RBP16.75■□□□□ 0.27
SNRPF-203ENST00000551316 SIL1Q9H173 461 aa16.75■□□□□ 0.27
SNRPF-203ENST00000551316 PI4KBQ9UBF8 816 aa16.75■□□□□ 0.27
SNRPF-203ENST00000551316 FLT1P17948 1338 aa16.74■□□□□ 0.27
SNRPF-203ENST00000551316 DCXO43602 365 aa16.74■□□□□ 0.27
SNRPF-203ENST00000551316 ATP2A2P16615 1042 aaKnown RBP16.74■□□□□ 0.27
SNRPF-203ENST00000551316 TTLL4Q14679 1199 aa16.74■□□□□ 0.27
SNRPF-203ENST00000551316 TBC1D9Q6ZT07 1266 aa16.74■□□□□ 0.27
SNRPF-203ENST00000551316 ZGPATQ8N5A5 531 aaKnown RBP16.74■□□□□ 0.27
SNRPF-203ENST00000551316 TET1Q8NFU7 2136 aa16.74■□□□□ 0.27
SNRPF-203ENST00000551316 GDPD5Q8WTR4 605 aa16.74■□□□□ 0.27
SNRPF-203ENST00000551316 TSEN34Q9BSV6 310 aaKnown RBP16.74■□□□□ 0.27
SNRPF-203ENST00000551316 UBE2ZQ9H832 354 aaPredicted RBP16.74■□□□□ 0.27
SNRPF-203ENST00000551316 GNL3LQ9NVN8 582 aaKnown RBP16.74■□□□□ 0.27
SNRPF-203ENST00000551316 PALD1Q9ULE6 856 aa16.74■□□□□ 0.27
SNRPF-203ENST00000551316 SLC4A7Q9Y6M7 1214 aa16.74■□□□□ 0.27
SNRPF-203ENST00000551316 ZBBXA8MT70 800 aa16.73■□□□□ 0.27
SNRPF-203ENST00000551316 KRT37O76014 449 aa16.73■□□□□ 0.27
SNRPF-203ENST00000551316 ALADP13716 330 aa16.73■□□□□ 0.27
SNRPF-203ENST00000551316 AKR1A1P14550 325 aa16.73■□□□□ 0.27
SNRPF-203ENST00000551316 FOXK2Q01167 660 aa16.73■□□□□ 0.27
SNRPF-203ENST00000551316 TCF15Q12870 199 aa16.73■□□□□ 0.27
SNRPF-203ENST00000551316 NUP133Q8WUM0 1156 aa16.73■□□□□ 0.27
SNRPF-203ENST00000551316 SCLYQ96I15 445 aa16.73■□□□□ 0.27
SNRPF-203ENST00000551316 ALG13Q9NP73 1137 aaKnown RBP16.73■□□□□ 0.27
SNRPF-203ENST00000551316 PDS5AQ29RF7 1337 aaKnown RBP16.72■□□□□ 0.27
SNRPF-203ENST00000551316 MOXD2PA6NHM9 499 aa16.72■□□□□ 0.27
SNRPF-203ENST00000551316 ARVCFO00192 962 aa16.72■□□□□ 0.27
SNRPF-203ENST00000551316 STRNO43815 780 aa16.72■□□□□ 0.27
SNRPF-203ENST00000551316 GFRA3O60609 400 aa16.72■□□□□ 0.27
SNRPF-203ENST00000551316 ASGR1P07306 291 aa16.72■□□□□ 0.27
SNRPF-203ENST00000551316 KIAA1755Q5JYT7 1200 aa16.72■□□□□ 0.27
SNRPF-203ENST00000551316 SLF2Q8IX21 1173 aa16.72■□□□□ 0.27
SNRPF-203ENST00000551316 SHCBP1Q8NEM2 672 aa16.72■□□□□ 0.27
SNRPF-203ENST00000551316 TINF2Q9BSI4 451 aa16.72■□□□□ 0.27
SNRPF-203ENST00000551316 MTIF3Q9H2K0 278 aaKnown RBP16.72■□□□□ 0.27
SNRPF-203ENST00000551316 SAP30BPQ9UHR5 308 aaKnown RBP16.72■□□□□ 0.27
SNRPF-203ENST00000551316 MROH7Q68CQ1 1323 aa16.71■□□□□ 0.27
SNRPF-203ENST00000551316 TMEM67Q5HYA8 995 aa16.71■□□□□ 0.27
SNRPF-203ENST00000551316 ERICH6Q7L0X2 663 aa16.71■□□□□ 0.27
SNRPF-203ENST00000551316 ADGRA1Q86SQ6 560 aa16.71■□□□□ 0.27
SNRPF-203ENST00000551316 KIAA1683Q9H0B3 1180 aa16.71■□□□□ 0.27
SNRPF-203ENST00000551316 HIPK3Q9H422 1215 aa16.71■□□□□ 0.27
SNRPF-203ENST00000551316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.71■□□□□ 0.27
SNRPF-203ENST00000551316 CACNA1GO43497 2377 aa16.71■□□□□ 0.26
SNRPF-203ENST00000551316 ELP1O95163 1332 aa16.7■□□□□ 0.26
SNRPF-203ENST00000551316 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.7■□□□□ 0.26
SNRPF-203ENST00000551316 CTAGE5O15320 804 aa16.7■□□□□ 0.26
SNRPF-203ENST00000551316 KCNA5P22460 613 aa16.7■□□□□ 0.26
SNRPF-203ENST00000551316 EXOSC9Q06265 439 aaKnown RBP16.7■□□□□ 0.26
SNRPF-203ENST00000551316 LEXMQ3ZCV2 418 aa16.7■□□□□ 0.26
SNRPF-203ENST00000551316 NCAPG2Q86XI2 1143 aa16.7■□□□□ 0.26
SNRPF-203ENST00000551316 CRACR2BQ8N4Y2 399 aaPredicted RBP16.7■□□□□ 0.26
SNRPF-203ENST00000551316 GLT1D1Q96MS3 346 aa16.7■□□□□ 0.26
SNRPF-203ENST00000551316 NOC4LQ9BVI4 516 aaKnown RBP16.7■□□□□ 0.26
SNRPF-203ENST00000551316 NRBP1Q9UHY1 535 aa16.7■□□□□ 0.26
SNRPF-203ENST00000551316 NAV1Q8NEY1 1877 aa16.69■□□□□ 0.26
SNRPF-203ENST00000551316 A0A0U1RQG5 324 aaPredicted RBP16.69■□□□□ 0.26
SNRPF-203ENST00000551316 LCHNA4D1U4 455 aa16.69■□□□□ 0.26
SNRPF-203ENST00000551316 ZBTB22O15209 634 aa16.69■□□□□ 0.26
SNRPF-203ENST00000551316 PTGS1P23219 599 aa16.69■□□□□ 0.26
SNRPF-203ENST00000551316 GUCY1A2P33402 732 aa16.69■□□□□ 0.26
SNRPF-203ENST00000551316 ZNF792Q3KQV3 632 aa16.69■□□□□ 0.26
SNRPF-203ENST00000551316 WWC1Q8IX03 1113 aa16.69■□□□□ 0.26
SNRPF-203ENST00000551316 TGFBRAP1Q8WUH2 860 aa16.69■□□□□ 0.26
SNRPF-203ENST00000551316 AATFQ9NY61 560 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNRPF-203ENST00000551316 BAHCC1Q9P281 2608 aa16.69■□□□□ 0.26
SNRPF-203ENST00000551316 A0A1W2PRG0 241 aa16.68■□□□□ 0.26
SNRPF-203ENST00000551316 CST5P28325 142 aaPredicted RBP16.68■□□□□ 0.26
SNRPF-203ENST00000551316 PLS1Q14651 629 aa16.68■□□□□ 0.26
SNRPF-203ENST00000551316 RAB3GAP1Q15042 981 aa16.68■□□□□ 0.26
SNRPF-203ENST00000551316 PTCRAQ6ISU1 281 aaPredicted RBP16.68■□□□□ 0.26
SNRPF-203ENST00000551316 ABRAQ8N0Z2 381 aa16.68■□□□□ 0.26
SNRPF-203ENST00000551316 ATG4CQ96DT6 458 aa16.68■□□□□ 0.26
SNRPF-203ENST00000551316 GINM1Q9NU53 330 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms