RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 ATG9AQ7Z3C6 839 aa8.43□□□□□ -1.06
LIN7A-202ENST00000549417 SPRED2Q7Z698 418 aa8.43□□□□□ -1.06
LIN7A-202ENST00000549417 NCAPG2Q86XI2 1143 aa8.43□□□□□ -1.06
LIN7A-202ENST00000549417 FAM178BQ8IXR5 827 aa8.43□□□□□ -1.06
LIN7A-202ENST00000549417 ACER1Q8TDN7 264 aa8.43□□□□□ -1.06
LIN7A-202ENST00000549417 RPAP3Q9H6T3 665 aaPredicted RBP8.43□□□□□ -1.06
LIN7A-202ENST00000549417 PI4KBQ9UBF8 816 aa8.43□□□□□ -1.06
LIN7A-202ENST00000549417 ZNF318Q5VUA4 2279 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 STRNO43815 780 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 VAMP4O75379 141 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 IL9P15248 144 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 POU3F3P20264 500 aaPredicted RBP8.42□□□□□ -1.06
LIN7A-202ENST00000549417 FOXK2Q01167 660 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 GRB10Q13322 594 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 RAB3GAP1Q15042 981 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 SPTY2D1Q68D10 685 aaPredicted RBP8.42□□□□□ -1.06
LIN7A-202ENST00000549417 CCDC102BQ68D86 513 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 TBC1D9Q6ZT07 1266 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 MAPKAPK5Q8IW41 473 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 PRSS33Q8NF86 280 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 C12orf42Q96LP6 360 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 SPATC1LQ9H0A9 340 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 KCNH6Q9H252 994 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 SLC5A4Q9NY91 659 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 SAP30BPQ9UHR5 308 aaKnown RBP8.42□□□□□ -1.06
LIN7A-202ENST00000549417 PALD1Q9ULE6 856 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 MROH7Q68CQ1 1323 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 SYNRGQ9UMZ2 1314 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 SPTBN4Q9H254 2564 aa8.42□□□□□ -1.06
LIN7A-202ENST00000549417 COL4A4P53420 1690 aaPredicted RBP8.41□□□□□ -1.06
LIN7A-202ENST00000549417 SEMA3EO15041 775 aa8.41□□□□□ -1.06
LIN7A-202ENST00000549417 DCXO43602 365 aa8.41□□□□□ -1.06
LIN7A-202ENST00000549417 ZNF865P0CJ78 1059 aaPredicted RBP8.41□□□□□ -1.06
LIN7A-202ENST00000549417 CDK7P50613 346 aa8.41□□□□□ -1.06
LIN7A-202ENST00000549417 TMEM67Q5HYA8 995 aa8.41□□□□□ -1.06
LIN7A-202ENST00000549417 IER5LQ5T953 404 aa8.41□□□□□ -1.06
LIN7A-202ENST00000549417 PI16Q6UXB8 463 aa8.41□□□□□ -1.06
LIN7A-202ENST00000549417 LBX2Q6XYB7 198 aa8.41□□□□□ -1.06
LIN7A-202ENST00000549417 FAM126BQ8IXS8 530 aa8.41□□□□□ -1.06
LIN7A-202ENST00000549417 ZNF579Q8NAF0 562 aaKnown RBP8.41□□□□□ -1.06
LIN7A-202ENST00000549417 TGFBRAP1Q8WUH2 860 aa8.41□□□□□ -1.06
LIN7A-202ENST00000549417 GLT1D1Q96MS3 346 aa8.41□□□□□ -1.06
LIN7A-202ENST00000549417 TSEN34Q9BSV6 310 aaKnown RBP8.41□□□□□ -1.06
LIN7A-202ENST00000549417 HIPK3Q9H422 1215 aa8.41□□□□□ -1.06
LIN7A-202ENST00000549417 FAM86C1Q9NVL1 165 aa8.41□□□□□ -1.06
LIN7A-202ENST00000549417 RAI14Q9P0K7 980 aa8.41□□□□□ -1.06
LIN7A-202ENST00000549417 VPS13AQ96RL7 3174 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 MOXD2PA6NHM9 499 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 ARVCFO00192 962 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 TLR3O15455 904 aaKnown RBP8.4□□□□□ -1.06
LIN7A-202ENST00000549417 GFRA3O60609 400 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 ASGR1P07306 291 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 C6orf222P0C671 652 aaPredicted RBP8.4□□□□□ -1.06
LIN7A-202ENST00000549417 AKR1A1P14550 325 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 KCNA5P22460 613 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 RFX5P48382 616 aaPredicted RBP8.4□□□□□ -1.06
LIN7A-202ENST00000549417 TTLL4Q14679 1199 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 CCSAPQ6IQ19 270 aaPredicted RBP8.4□□□□□ -1.06
LIN7A-202ENST00000549417 KLHDC9Q8NEP7 349 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.4□□□□□ -1.06
LIN7A-202ENST00000549417 GDPD5Q8WTR4 605 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 NSUN4Q96CB9 384 aaKnown RBP8.4□□□□□ -1.06
LIN7A-202ENST00000549417 SCLYQ96I15 445 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 TINF2Q9BSI4 451 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 TANGO6Q9C0B7 1094 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 UBE2ZQ9H832 354 aaPredicted RBP8.4□□□□□ -1.06
LIN7A-202ENST00000549417 CEP126Q9P2H0 1117 aa8.4□□□□□ -1.06
LIN7A-202ENST00000549417 ZFHX2Q9C0A1 2572 aaPredicted RBP8.4□□□□□ -1.07
LIN7A-202ENST00000549417 ELP1O95163 1332 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 FANCIQ9NVI1 1328 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 A0A0U1RQG5 324 aaPredicted RBP8.39□□□□□ -1.07
LIN7A-202ENST00000549417 LPXNO60711 386 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 CD4P01730 458 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 LDHCP07864 332 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 FCER1AP12319 257 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 USP14P54578 494 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 TIMM10P62072 90 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 GSTO1P78417 241 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 TAP1Q03518 808 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 EXOSC9Q06265 439 aaKnown RBP8.39□□□□□ -1.07
LIN7A-202ENST00000549417 CCDC27Q2M243 656 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 PTCRAQ6ISU1 281 aaPredicted RBP8.39□□□□□ -1.07
LIN7A-202ENST00000549417 VWCEQ96DN2 955 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 WNT8AQ9H1J5 351 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 DHX36Q9H2U1 1008 aaKnown RBP8.39□□□□□ -1.07
LIN7A-202ENST00000549417 AATFQ9NY61 560 aaKnown RBP eCLIP8.39□□□□□ -1.07
LIN7A-202ENST00000549417 ZHX1Q9UKY1 873 aaPredicted RBP8.39□□□□□ -1.07
LIN7A-202ENST00000549417 CNPY2Q9Y2B0 182 aa8.39□□□□□ -1.07
LIN7A-202ENST00000549417 FLT1P17948 1338 aa8.38□□□□□ -1.07
LIN7A-202ENST00000549417 SCN5AQ14524 2016 aa8.38□□□□□ -1.07
LIN7A-202ENST00000549417 POTEB3A0JP26 581 aa8.38□□□□□ -1.07
LIN7A-202ENST00000549417 ADCY6O43306 1168 aa8.38□□□□□ -1.07
LIN7A-202ENST00000549417 KRT37O76014 449 aa8.38□□□□□ -1.07
LIN7A-202ENST00000549417 COG2Q14746 738 aa8.38□□□□□ -1.07
LIN7A-202ENST00000549417 POTEBQ6S5H4 581 aa8.38□□□□□ -1.07
LIN7A-202ENST00000549417 DEFB128Q7Z7B8 93 aa8.38□□□□□ -1.07
LIN7A-202ENST00000549417 METTL16Q86W50 562 aaKnown RBP8.38□□□□□ -1.07
LIN7A-202ENST00000549417 FOXP4Q8IVH2 680 aaPredicted RBP8.38□□□□□ -1.07
LIN7A-202ENST00000549417 ABRAQ8N0Z2 381 aa8.38□□□□□ -1.07
LIN7A-202ENST00000549417 SHCBP1Q8NEM2 672 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms