RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 MYH8P13535 1937 aa29.59■■■□□ 2.33
COL13A1-214ENST00000522165 ZNF500O60304 480 aaPredicted RBP29.59■■■□□ 2.33
COL13A1-214ENST00000522165 HLA-DOAP06340 250 aa29.59■■■□□ 2.33
COL13A1-214ENST00000522165 SMARCA1P28370 1054 aa29.59■■■□□ 2.33
COL13A1-214ENST00000522165 FAM177A1Q8N128 213 aaPredicted RBP29.59■■■□□ 2.33
COL13A1-214ENST00000522165 CCDC148Q8NFR7 591 aa29.59■■■□□ 2.33
COL13A1-214ENST00000522165 STXBP3O00186 592 aa29.58■■■□□ 2.33
COL13A1-214ENST00000522165 SHMT1P34896 483 aa29.58■■■□□ 2.33
COL13A1-214ENST00000522165 AOPEPQ8N6M6 819 aa29.58■■■□□ 2.33
COL13A1-214ENST00000522165 DAGLBQ8NCG7 672 aa29.58■■■□□ 2.33
COL13A1-214ENST00000522165 ATP2C1P98194 919 aaPredicted RBP29.57■■■□□ 2.32
COL13A1-214ENST00000522165 MDM2Q00987 491 aaPredicted RBP29.57■■■□□ 2.32
COL13A1-214ENST00000522165 GALNT17Q6IS24 598 aa29.57■■■□□ 2.32
COL13A1-214ENST00000522165 HEATR3Q7Z4Q2 680 aa29.57■■■□□ 2.32
COL13A1-214ENST00000522165 SUPT20HQ8NEM7 779 aa29.57■■■□□ 2.32
COL13A1-214ENST00000522165 PCDHAC2Q9Y5I4 1007 aa29.57■■■□□ 2.32
COL13A1-214ENST00000522165 M0R2N6 131 aa29.57■■■□□ 2.32
COL13A1-214ENST00000522165 POLR2DO15514 142 aaKnown RBP29.57■■■□□ 2.32
COL13A1-214ENST00000522165 USP49Q70CQ1 688 aa29.57■■■□□ 2.32
COL13A1-214ENST00000522165 SPC24Q8NBT2 197 aa29.57■■■□□ 2.32
COL13A1-214ENST00000522165 EHD4Q9H223 541 aa29.57■■■□□ 2.32
COL13A1-214ENST00000522165 CPVLQ9H3G5 476 aa29.57■■■□□ 2.32
COL13A1-214ENST00000522165 C10orf71Q711Q0 1435 aa29.57■■■□□ 2.32
COL13A1-214ENST00000522165 USP17L5A8MUK1 530 aa29.56■■■□□ 2.32
COL13A1-214ENST00000522165 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.56■■■□□ 2.32
COL13A1-214ENST00000522165 PTGDRQ13258 359 aa29.56■■■□□ 2.32
COL13A1-214ENST00000522165 ZFPM1Q8IX07 1006 aa29.56■■■□□ 2.32
COL13A1-214ENST00000522165 HOOK1Q9UJC3 728 aaKnown RBP29.56■■■□□ 2.32
COL13A1-214ENST00000522165 GOLGA6L6A8MZA4 724 aa29.55■■■□□ 2.32
COL13A1-214ENST00000522165 FOXP4Q8IVH2 680 aaPredicted RBP29.55■■■□□ 2.32
COL13A1-214ENST00000522165 ZNF830Q96NB3 372 aaPredicted RBP29.55■■■□□ 2.32
COL13A1-214ENST00000522165 SERPINA10Q9UK55 444 aa29.55■■■□□ 2.32
COL13A1-214ENST00000522165 C21orf2O43822 256 aa29.54■■■□□ 2.32
COL13A1-214ENST00000522165 PDHBP11177 359 aa29.54■■■□□ 2.32
COL13A1-214ENST00000522165 BAG6P46379 1132 aa29.54■■■□□ 2.32
COL13A1-214ENST00000522165 RBM5P52756 815 aaKnown RBP eCLIP29.54■■■□□ 2.32
COL13A1-214ENST00000522165 IDI2Q9BXS1 227 aa29.54■■■□□ 2.32
COL13A1-214ENST00000522165 SERTAD1Q9UHV2 236 aa29.54■■■□□ 2.32
COL13A1-214ENST00000522165 TPM3P06753 285 aa29.54■■■□□ 2.32
COL13A1-214ENST00000522165 RRP36Q96EU6 259 aaKnown RBP29.54■■■□□ 2.32
COL13A1-214ENST00000522165 FOXN1O15353 648 aa29.53■■■□□ 2.32
COL13A1-214ENST00000522165 TTLL1O95922 423 aa29.53■■■□□ 2.32
COL13A1-214ENST00000522165 RASGRP4Q8TDF6 673 aa29.53■■■□□ 2.32
COL13A1-214ENST00000522165 TTC12Q9H892 705 aaPredicted RBP29.53■■■□□ 2.32
COL13A1-214ENST00000522165 PCDHA6Q9UN73 950 aa29.53■■■□□ 2.32
COL13A1-214ENST00000522165 PCDHA8Q9Y5H6 950 aa29.53■■■□□ 2.32
COL13A1-214ENST00000522165 PCDHA5Q9Y5H7 936 aa29.53■■■□□ 2.32
COL13A1-214ENST00000522165 PPIP5K2O43314 1243 aa29.52■■■□□ 2.32
COL13A1-214ENST00000522165 ACTN4O43707 911 aaKnown RBP29.52■■■□□ 2.32
COL13A1-214ENST00000522165 CACNB3P54284 484 aa29.52■■■□□ 2.32
COL13A1-214ENST00000522165 SF3B2Q13435 895 aaKnown RBP29.52■■■□□ 2.32
COL13A1-214ENST00000522165 DEFB132Q7Z7B7 95 aa29.52■■■□□ 2.32
COL13A1-214ENST00000522165 LRRC47Q8N1G4 583 aaKnown RBP29.52■■■□□ 2.32
COL13A1-214ENST00000522165 DHX36Q9H2U1 1008 aaKnown RBP29.52■■■□□ 2.32
COL13A1-214ENST00000522165 FAM198AQ9UFP1 575 aa29.52■■■□□ 2.32
COL13A1-214ENST00000522165 SNHG28P0DPA3 235 aa29.52■■■□□ 2.32
COL13A1-214ENST00000522165 CDC25BP30305 580 aa29.52■■■□□ 2.32
COL13A1-214ENST00000522165 POSTNQ15063 836 aa29.52■■■□□ 2.32
COL13A1-214ENST00000522165 ISM2Q6H9L7 571 aa29.52■■■□□ 2.32
COL13A1-214ENST00000522165 CLEC10AQ8IUN9 316 aa29.52■■■□□ 2.32
COL13A1-214ENST00000522165 PDILTQ8N807 584 aa29.52■■■□□ 2.32
COL13A1-214ENST00000522165 EPSTI1Q96J88 318 aa29.52■■■□□ 2.32
COL13A1-214ENST00000522165 RIOX1Q9H6W3 641 aa29.52■■■□□ 2.32
COL13A1-214ENST00000522165 CLIP2Q9UDT6 1046 aa29.52■■■□□ 2.32
COL13A1-214ENST00000522165 GREB1LQ9C091 1923 aaPredicted RBP29.51■■■□□ 2.32
COL13A1-214ENST00000522165 NPM3O75607 178 aaKnown RBP29.51■■■□□ 2.31
COL13A1-214ENST00000522165 MCM7P33993 719 aa29.51■■■□□ 2.31
COL13A1-214ENST00000522165 EIF6P56537 245 aaKnown RBP29.51■■■□□ 2.31
COL13A1-214ENST00000522165 ASPRV1Q53RT3 343 aa29.51■■■□□ 2.31
COL13A1-214ENST00000522165 KANK3Q6NY19 840 aa29.51■■■□□ 2.31
COL13A1-214ENST00000522165 SYMPKQ92797 1274 aaKnown RBP29.51■■■□□ 2.31
COL13A1-214ENST00000522165 ZMYND12Q9H0C1 365 aa29.51■■■□□ 2.31
COL13A1-214ENST00000522165 CCDC194A0A1B0GVG4 234 aa29.51■■■□□ 2.31
COL13A1-214ENST00000522165 YDJCA8MPS7 323 aa29.51■■■□□ 2.31
COL13A1-214ENST00000522165 GRIPAP1Q4V328 841 aa29.51■■■□□ 2.31
COL13A1-214ENST00000522165 TTLL6Q8N841 843 aa29.51■■■□□ 2.31
COL13A1-214ENST00000522165 CCDC12Q8WUD4 166 aaPredicted RBP29.51■■■□□ 2.31
COL13A1-214ENST00000522165 SEC63Q9UGP8 760 aaKnown RBP29.51■■■□□ 2.31
COL13A1-214ENST00000522165 TCP10Q12799 353 aa29.5■■■□□ 2.31
COL13A1-214ENST00000522165 HOMER1Q86YM7 354 aa29.5■■■□□ 2.31
COL13A1-214ENST00000522165 MRFAP1L1Q96HT8 127 aa29.5■■■□□ 2.31
COL13A1-214ENST00000522165 DNAJC18Q9H819 358 aa29.5■■■□□ 2.31
COL13A1-214ENST00000522165 SIPA1L1O43166 1804 aa29.5■■■□□ 2.31
COL13A1-214ENST00000522165 A0A087X0B3 334 aa29.49■■■□□ 2.31
COL13A1-214ENST00000522165 VWA3AA6NCI4 1184 aa29.49■■■□□ 2.31
COL13A1-214ENST00000522165 NAPAP54920 295 aa29.49■■■□□ 2.31
COL13A1-214ENST00000522165 CCDC17Q96LX7 622 aa29.49■■■□□ 2.31
COL13A1-214ENST00000522165 PIGSQ96S52 555 aa29.49■■■□□ 2.31
COL13A1-214ENST00000522165 UBA5Q9GZZ9 404 aa29.49■■■□□ 2.31
COL13A1-214ENST00000522165 FRMPD2Q68DX3 1309 aaPredicted RBP29.49■■■□□ 2.31
COL13A1-214ENST00000522165 DDTLA6NHG4 134 aaPredicted RBP29.49■■■□□ 2.31
COL13A1-214ENST00000522165 NT5DC1Q5TFE4 455 aa29.49■■■□□ 2.31
COL13A1-214ENST00000522165 DRC7Q8IY82 874 aa29.49■■■□□ 2.31
COL13A1-214ENST00000522165 C4orf32Q8N8J7 132 aa29.49■■■□□ 2.31
COL13A1-214ENST00000522165 VAT1LQ9HCJ6 419 aa29.49■■■□□ 2.31
COL13A1-214ENST00000522165 SLURP2P0DP57 97 aa29.48■■■□□ 2.31
COL13A1-214ENST00000522165 ARL6IP4Q66PJ3 421 aaKnown RBP29.48■■■□□ 2.31
COL13A1-214ENST00000522165 PI4KBQ9UBF8 816 aa29.48■■■□□ 2.31
COL13A1-214ENST00000522165 SMTNL1A8MU46 457 aa29.48■■■□□ 2.31
COL13A1-214ENST00000522165 IKBKBO14920 756 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms