RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 LRRC26Q2I0M4 334 aa13.72□□□□□ -0.21
SCFD1-206ENST00000484733 NCAPG2Q86XI2 1143 aa13.72□□□□□ -0.21
SCFD1-206ENST00000484733 PPP1R9AQ9ULJ8 1098 aa13.72□□□□□ -0.21
SCFD1-206ENST00000484733 COL11A1P12107 1806 aaPredicted RBP13.72□□□□□ -0.21
SCFD1-206ENST00000484733 FCER1AP12319 257 aa13.72□□□□□ -0.21
SCFD1-206ENST00000484733 CNGA1P29973 690 aa13.72□□□□□ -0.21
SCFD1-206ENST00000484733 GPR153Q6NV75 609 aa13.72□□□□□ -0.21
SCFD1-206ENST00000484733 REPS2Q8NFH8 660 aa13.72□□□□□ -0.21
SCFD1-206ENST00000484733 SYNPO2Q9UMS6 1093 aa13.72□□□□□ -0.21
SCFD1-206ENST00000484733 DIS3Q9Y2L1 958 aaKnown RBP13.72□□□□□ -0.21
SCFD1-206ENST00000484733 ZNFX1Q9P2E3 1918 aaKnown RBP13.72□□□□□ -0.21
SCFD1-206ENST00000484733 TRIOBPQ9H2D6 2365 aa13.71□□□□□ -0.21
SCFD1-206ENST00000484733 IGKV6D-41A0A0C4DH26 115 aa13.71□□□□□ -0.21
SCFD1-206ENST00000484733 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
SCFD1-206ENST00000484733 VWA5AO00534 786 aa13.71□□□□□ -0.21
SCFD1-206ENST00000484733 ERC2O15083 957 aa13.71□□□□□ -0.21
SCFD1-206ENST00000484733 GPAA1O43292 621 aa13.71□□□□□ -0.21
SCFD1-206ENST00000484733 MAGEA10P43363 369 aaPredicted RBP13.71□□□□□ -0.21
SCFD1-206ENST00000484733 PLS1Q14651 629 aa13.71□□□□□ -0.21
SCFD1-206ENST00000484733 ARRDC4Q8NCT1 418 aa13.71□□□□□ -0.21
SCFD1-206ENST00000484733 MAML3Q96JK9 1138 aa13.71□□□□□ -0.21
SCFD1-206ENST00000484733 MKNK2Q9HBH9 465 aa13.71□□□□□ -0.21
SCFD1-206ENST00000484733 SEPT4O43236 478 aa13.7□□□□□ -0.22
SCFD1-206ENST00000484733 MKL1Q969V6 931 aa13.7□□□□□ -0.22
SCFD1-206ENST00000484733 ZNF287Q9HBT7 754 aa13.7□□□□□ -0.22
SCFD1-206ENST00000484733 EPB41L4AQ9HCS5 686 aaPredicted RBP13.7□□□□□ -0.22
SCFD1-206ENST00000484733 PCDHB15Q9Y5E8 787 aa13.7□□□□□ -0.22
SCFD1-206ENST00000484733 SOX1O00570 391 aaPredicted RBP13.7□□□□□ -0.22
SCFD1-206ENST00000484733 SYN1P17600 705 aa13.7□□□□□ -0.22
SCFD1-206ENST00000484733 STAT3P40763 770 aa13.7□□□□□ -0.22
SCFD1-206ENST00000484733 FAM83BQ5T0W9 1011 aa13.7□□□□□ -0.22
SCFD1-206ENST00000484733 PI4K2BQ8TCG2 481 aa13.7□□□□□ -0.22
SCFD1-206ENST00000484733 FBXO28Q9NVF7 368 aa13.7□□□□□ -0.22
SCFD1-206ENST00000484733 MINDY4BA8MYZ0 360 aa13.69□□□□□ -0.22
SCFD1-206ENST00000484733 M0R2C6 588 aa13.69□□□□□ -0.22
SCFD1-206ENST00000484733 LRIT3Q3SXY7 679 aa13.69□□□□□ -0.22
SCFD1-206ENST00000484733 TSHZ3Q63HK5 1081 aa13.69□□□□□ -0.22
SCFD1-206ENST00000484733 MMP19Q99542 508 aa13.69□□□□□ -0.22
SCFD1-206ENST00000484733 SENP6Q9GZR1 1112 aaPredicted RBP13.69□□□□□ -0.22
SCFD1-206ENST00000484733 ZNF214Q9UL59 606 aaPredicted RBP13.69□□□□□ -0.22
SCFD1-206ENST00000484733 ZNF792Q3KQV3 632 aa13.69□□□□□ -0.22
SCFD1-206ENST00000484733 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.69□□□□□ -0.22
SCFD1-206ENST00000484733 IFNL3Q8IZI9 196 aa13.69□□□□□ -0.22
SCFD1-206ENST00000484733 SLF1Q9BQI6 1058 aa13.69□□□□□ -0.22
SCFD1-206ENST00000484733 PLIN4Q96Q06 1357 aa13.68□□□□□ -0.22
SCFD1-206ENST00000484733 F5H6K3 240 aa13.68□□□□□ -0.22
SCFD1-206ENST00000484733 ATP2A1O14983 1001 aa13.68□□□□□ -0.22
SCFD1-206ENST00000484733 TDO2P48775 406 aa13.68□□□□□ -0.22
SCFD1-206ENST00000484733 KLRC3Q07444 240 aa13.68□□□□□ -0.22
SCFD1-206ENST00000484733 TDHQ8IZJ6 230 aa13.68□□□□□ -0.22
SCFD1-206ENST00000484733 ZNF444Q8N0Y2 327 aaPredicted RBP13.68□□□□□ -0.22
SCFD1-206ENST00000484733 PLXNA1Q9UIW2 1896 aa13.68□□□□□ -0.22
SCFD1-206ENST00000484733 NDUFB10O96000 172 aa13.68□□□□□ -0.22
SCFD1-206ENST00000484733 KCTD2Q14681 263 aa13.68□□□□□ -0.22
SCFD1-206ENST00000484733 ZMYM1Q5SVZ6 1142 aa13.68□□□□□ -0.22
SCFD1-206ENST00000484733 MSL3Q8N5Y2 521 aaKnown RBP13.68□□□□□ -0.22
SCFD1-206ENST00000484733 NACAP1Q9BZK3 213 aa13.68□□□□□ -0.22
SCFD1-206ENST00000484733 UBE2OQ9C0C9 1292 aaKnown RBP13.68□□□□□ -0.22
SCFD1-206ENST00000484733 SALL3Q9BXA9 1300 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 MYH4Q9Y623 1939 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 KBTBD13C9JR72 458 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 PRPF38AQ8NAV1 312 aaKnown RBP13.67□□□□□ -0.22
SCFD1-206ENST00000484733 LRCH3Q96II8 777 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 MTMR4Q9NYA4 1195 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 CLIP2Q9UDT6 1046 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 RTP1P59025 263 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 SNX17Q15036 470 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 GJC2Q5T442 439 aaPredicted RBP13.67□□□□□ -0.22
SCFD1-206ENST00000484733 C1orf53Q5VUE5 145 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
SCFD1-206ENST00000484733 SLC39A5Q6ZMH5 540 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 GMCL1P1Q8NEA9 526 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 NEDD1Q8NHV4 660 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 TINF2Q9BSI4 451 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 TEX13BQ9BXU2 312 aa13.67□□□□□ -0.22
SCFD1-206ENST00000484733 APPP05067 770 aa13.66□□□□□ -0.22
SCFD1-206ENST00000484733 MX1P20591 662 aa13.66□□□□□ -0.22
SCFD1-206ENST00000484733 RRP1P56182 461 aaKnown RBP13.66□□□□□ -0.22
SCFD1-206ENST00000484733 PRAMEF19Q5SWL8 479 aa13.66□□□□□ -0.22
SCFD1-206ENST00000484733 FEM1BQ9UK73 627 aa13.66□□□□□ -0.22
SCFD1-206ENST00000484733 ZBED4O75132 1171 aa13.65□□□□□ -0.22
SCFD1-206ENST00000484733 TTLL1O95922 423 aa13.65□□□□□ -0.22
SCFD1-206ENST00000484733 SLC3A2P08195 630 aaKnown RBP13.65□□□□□ -0.22
SCFD1-206ENST00000484733 PDE4BQ07343 736 aa13.65□□□□□ -0.22
SCFD1-206ENST00000484733 LRRC41Q15345 812 aa13.65□□□□□ -0.22
SCFD1-206ENST00000484733 TICAM2Q86XR7 235 aa13.65□□□□□ -0.22
SCFD1-206ENST00000484733 OTUD7AQ8TE49 926 aaPredicted RBP13.65□□□□□ -0.22
SCFD1-206ENST00000484733 NUP88Q99567 741 aaPredicted RBP13.65□□□□□ -0.22
SCFD1-206ENST00000484733 FSD1Q9BTV5 496 aa13.65□□□□□ -0.22
SCFD1-206ENST00000484733 RAD21O60216 631 aa13.65□□□□□ -0.22
SCFD1-206ENST00000484733 FDX1P10109 184 aa13.65□□□□□ -0.22
SCFD1-206ENST00000484733 PPP4R3BQ5MIZ7 849 aa13.65□□□□□ -0.22
SCFD1-206ENST00000484733 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
SCFD1-206ENST00000484733 STK11IPQ8N1F8 1099 aa13.65□□□□□ -0.22
SCFD1-206ENST00000484733 CEP95Q96GE4 821 aa13.65□□□□□ -0.22
SCFD1-206ENST00000484733 SEC62Q99442 399 aaKnown RBP13.65□□□□□ -0.22
SCFD1-206ENST00000484733 PHF24Q9UPV7 400 aa13.65□□□□□ -0.22
SCFD1-206ENST00000484733 DNAJC25-GNG10A0A024R161 153 aa13.64□□□□□ -0.23
SCFD1-206ENST00000484733 PGK2P07205 417 aa13.64□□□□□ -0.23
SCFD1-206ENST00000484733 ZNF865P0CJ78 1059 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms