RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 DHX38Q92620 1227 aaKnown RBP4.3□□□□□ -1.72
LSM2-211ENST00000475835 SNF8Q96H20 258 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 ERO1AQ96HE7 468 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 SERINC2Q96SA4 455 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 SMC6Q96SB8 1091 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 IER2Q9BTL4 223 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 HERC2P3Q9BVR0 1158 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 OXCT2Q9BYC2 517 aaPredicted RBP4.3□□□□□ -1.72
LSM2-211ENST00000475835 TRIM5Q9C035 493 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 NSRP1Q9H0G5 558 aaKnown RBP4.3□□□□□ -1.72
LSM2-211ENST00000475835 ZWILCHQ9H900 591 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 CLK4Q9HAZ1 481 aaKnown RBP4.3□□□□□ -1.72
LSM2-211ENST00000475835 CYP4F11Q9HBI6 524 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 DSEQ9UL01 958 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 MAPK8IP1Q9UQF2 711 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 GNEQ9Y223 722 aaKnown RBP4.3□□□□□ -1.72
LSM2-211ENST00000475835 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.3□□□□□ -1.72
LSM2-211ENST00000475835 PCDHGC5Q9Y5F6 944 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.3□□□□□ -1.72
LSM2-211ENST00000475835 SYNMO15061 1565 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 PLXNC1O60486 1568 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 SAMD9LQ8IVG5 1584 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 CCDC141Q6ZP82 1450 aa4.3□□□□□ -1.72
LSM2-211ENST00000475835 MYPNQ86TC9 1320 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 PRRT4C9JH25 899 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 E9PMD0 336 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 M0R2C6 588 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 NMT2O60551 498 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 TADA3O75528 432 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 RNF8O76064 485 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 ARIH2O95376 493 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 CYP1A2P05177 515 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 MYL3P08590 195 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 H2AFXP16104 143 aaPredicted RBP4.29□□□□□ -1.72
LSM2-211ENST00000475835 S100A1P23297 94 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 SLC8A1P32418 973 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 SKIV2L2P42285 1042 aaKnown RBP4.29□□□□□ -1.72
LSM2-211ENST00000475835 SLC4A3P48751 1232 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 MXI1P50539 228 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 INHBCP55103 352 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 MARSP56192 900 aaKnown RBP4.29□□□□□ -1.72
LSM2-211ENST00000475835 NLRP5P59047 1200 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 BPIFB3P59826 476 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 CDK17Q00537 523 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 LAPTM5Q13571 262 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 WDR43Q15061 677 aaKnown RBP eCLIP4.29□□□□□ -1.72
LSM2-211ENST00000475835 ENOX2Q16206 610 aaKnown RBP4.29□□□□□ -1.72
LSM2-211ENST00000475835 CCDC153Q494R4 210 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 TNNI3KQ59H18 835 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 CEP85LQ5SZL2 805 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 NDUFAF5Q5TEU4 345 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 VPS53Q5VIR6 699 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 NCAPH2Q6IBW4 605 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 C8orf74Q6P047 294 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 CYP26C1Q6V0L0 522 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 DBX2Q6ZNG2 339 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 USP51Q70EK9 711 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 TAS1R3Q7RTX0 852 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 TMC6Q7Z403 805 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 HOOK3Q86VS8 718 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 NPAS4Q8IUM7 802 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.29□□□□□ -1.72
LSM2-211ENST00000475835 SPC24Q8NBT2 197 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 SLAIN1Q8ND83 568 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 KLHDC4Q8TBB5 520 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 AFAP1L1Q8TED9 768 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 SGCDQ92629 289 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 ATP6V0A1Q93050 837 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 ZNF653Q96CK0 615 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 HVCN1Q96D96 273 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 NRBF2Q96F24 287 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 CLMNQ96JQ2 1002 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 FRMD6Q96NE9 622 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 USP26Q9BXU7 913 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 PARD6BQ9BYG5 372 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.29□□□□□ -1.72
LSM2-211ENST00000475835 TTC12Q9H892 705 aaPredicted RBP4.29□□□□□ -1.72
LSM2-211ENST00000475835 RIC8AQ9NPQ8 531 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 GPR108Q9NPR9 543 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 CYLDQ9NQC7 956 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 HELLSQ9NRZ9 838 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 TYW1Q9NV66 732 aaKnown RBP4.29□□□□□ -1.72
LSM2-211ENST00000475835 PPP1R14DQ9NXH3 145 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 MIS18AQ9NYP9 233 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 CCPG1Q9ULG6 757 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 PPP1R9AQ9ULJ8 1098 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 CORO1CQ9ULV4 474 aaPredicted RBP4.29□□□□□ -1.72
LSM2-211ENST00000475835 SCAF8Q9UPN6 1271 aaKnown RBP4.29□□□□□ -1.72
LSM2-211ENST00000475835 C2CD2Q9Y426 696 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 ZNF711Q9Y462 761 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 TRIM17Q9Y577 477 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 PCDHB2Q9Y5E7 798 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 ZNF608Q9ULD9 1512 aaPredicted RBP4.29□□□□□ -1.72
LSM2-211ENST00000475835 PLB1Q6P1J6 1458 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 NUP160Q12769 1436 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 PRAG1Q86YV5 1406 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 MYOM1P52179 1685 aa4.29□□□□□ -1.72
LSM2-211ENST00000475835 GPRASP1Q5JY77 1395 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ANKRD36BQ8N2N9 1353 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 SYCP2Q9BX26 1530 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms