RNA–Protein interactions for RNA: ENST00000474557.1

HMGN1P10-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 10, humanhuman

BASIC

Gene HMGN1P10, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P10-201ENST00000474557 NCKAP1LP55160 1127 aa5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 GJA9P57773 515 aa5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 PDE4BQ07343 736 aa5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 TARBP2Q15633 366 aaKnown RBP5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 PI16Q6UXB8 463 aa5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 WAPLQ7Z5K2 1190 aa5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 C3orf58Q8NDZ4 430 aa5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 DDX1Q92499 740 aaKnown RBP5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 ALKBH8Q96BT7 664 aaKnown RBP5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 MAP6Q96JE9 813 aa5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 SPATA25Q9BR10 227 aa5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 SRCIN1Q9C0H9 1055 aa5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 TJP2Q9UDY2 1190 aa5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 SUSD2Q9UGT4 822 aa5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 ZNF281Q9Y2X9 895 aa5.78□□□□□ -1.48
HMGN1P10-201ENST00000474557 SSU72P8A0A1W2PR75 194 aa5.77□□□□□ -1.49
HMGN1P10-201ENST00000474557 RBM47A0AV96 593 aaKnown RBP5.77□□□□□ -1.49
HMGN1P10-201ENST00000474557 LMNB1P20700 586 aa5.77□□□□□ -1.49
HMGN1P10-201ENST00000474557 RNF141Q8WVD5 230 aa5.77□□□□□ -1.49
HMGN1P10-201ENST00000474557 DVL3Q92997 716 aaPredicted RBP5.77□□□□□ -1.49
HMGN1P10-201ENST00000474557 LIMS1P48059 325 aa5.76□□□□□ -1.49
HMGN1P10-201ENST00000474557 PTPN11Q06124 597 aaPredicted RBP5.76□□□□□ -1.49
HMGN1P10-201ENST00000474557 RASIP1Q5U651 963 aa5.76□□□□□ -1.49
HMGN1P10-201ENST00000474557 GALNT18Q6P9A2 607 aa5.76□□□□□ -1.49
HMGN1P10-201ENST00000474557 SH3RF3Q8TEJ3 882 aaPredicted RBP5.76□□□□□ -1.49
HMGN1P10-201ENST00000474557 KISS1RQ969F8 398 aaPredicted RBP5.76□□□□□ -1.49
HMGN1P10-201ENST00000474557 NUDT19A8MXV4 375 aa5.75□□□□□ -1.49
HMGN1P10-201ENST00000474557 FBXO24O75426 580 aa5.75□□□□□ -1.49
HMGN1P10-201ENST00000474557 RTP1P59025 263 aa5.75□□□□□ -1.49
HMGN1P10-201ENST00000474557 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.75□□□□□ -1.49
HMGN1P10-201ENST00000474557 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.75□□□□□ -1.49
HMGN1P10-201ENST00000474557 MCATQ8IVS2 390 aaKnown RBP5.75□□□□□ -1.49
HMGN1P10-201ENST00000474557 ENOX1Q8TC92 643 aaKnown RBP5.75□□□□□ -1.49
HMGN1P10-201ENST00000474557 CCDC97Q96F63 343 aaPredicted RBP5.75□□□□□ -1.49
HMGN1P10-201ENST00000474557 RBM15Q96T37 977 aaKnown RBP eCLIP5.75□□□□□ -1.49
HMGN1P10-201ENST00000474557 TAF6LQ9Y6J9 622 aa5.75□□□□□ -1.49
HMGN1P10-201ENST00000474557 WTIPA6NIX2 430 aaPredicted RBP5.74□□□□□ -1.49
HMGN1P10-201ENST00000474557 RBAK-RBAKDNI3L0D1 243 aa5.74□□□□□ -1.49
HMGN1P10-201ENST00000474557 EFEMP2O95967 443 aa5.74□□□□□ -1.49
HMGN1P10-201ENST00000474557 CRIP3Q6Q6R5 217 aa5.74□□□□□ -1.49
HMGN1P10-201ENST00000474557 CYB5D2Q8WUJ1 264 aa5.74□□□□□ -1.49
HMGN1P10-201ENST00000474557 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
HMGN1P10-201ENST00000474557 LNPKQ9C0E8 428 aa5.74□□□□□ -1.49
HMGN1P10-201ENST00000474557 DUSP10Q9Y6W6 482 aa5.74□□□□□ -1.49
HMGN1P10-201ENST00000474557 TMEM88BA6NKF7 163 aa5.73□□□□□ -1.49
HMGN1P10-201ENST00000474557 MSL3P1P0C860 447 aa5.73□□□□□ -1.49
HMGN1P10-201ENST00000474557 IGFBP6P24592 240 aaPredicted RBP5.73□□□□□ -1.49
HMGN1P10-201ENST00000474557 TNNI2P48788 182 aa5.73□□□□□ -1.49
HMGN1P10-201ENST00000474557 PCBP3P57721 371 aaKnown RBP5.73□□□□□ -1.49
HMGN1P10-201ENST00000474557 ARHGAP4P98171 946 aa5.73□□□□□ -1.49
HMGN1P10-201ENST00000474557 Q8N1X5 172 aa5.73□□□□□ -1.49
HMGN1P10-201ENST00000474557 ANKRD24Q8TF21 1146 aa5.73□□□□□ -1.49
HMGN1P10-201ENST00000474557 GAL3ST3Q96A11 431 aa5.73□□□□□ -1.49
HMGN1P10-201ENST00000474557 ADAM30Q9UKF2 790 aa5.73□□□□□ -1.49
HMGN1P10-201ENST00000474557 PMF1-BGLAPU3KQ54 211 aa5.73□□□□□ -1.49
HMGN1P10-201ENST00000474557 SH3D21A4FU49 640 aa5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 NOBOXO60393 691 aa5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 CHMP4BP1P59074 171 aa5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 CBX2Q14781 532 aaPredicted RBP5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 VWA3BQ502W6 1294 aa5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 DIEXFQ68CQ4 756 aaKnown RBP5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 ZC3H14Q6PJT7 736 aaKnown RBP5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 SPRED1Q7Z699 444 aa5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 ADGRG2Q8IZP9 1017 aa5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 FNIP1Q8TF40 1166 aa5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 HHIPL1Q96JK4 782 aa5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 ASPNQ9BXN1 380 aa5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 PCED1AQ9H1Q7 454 aa5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 TNFRSF10DQ9UBN6 386 aa5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 FAN1Q9Y2M0 1017 aa5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 IRS2Q9Y4H2 1338 aa5.72□□□□□ -1.49
HMGN1P10-201ENST00000474557 A0A1B0GTL3 188 aa5.71□□□□□ -1.5
HMGN1P10-201ENST00000474557 LRRN2O75325 713 aa5.71□□□□□ -1.5
HMGN1P10-201ENST00000474557 CELA3AP09093 270 aa5.71□□□□□ -1.5
HMGN1P10-201ENST00000474557 YARSP54577 528 aaKnown RBP5.71□□□□□ -1.5
HMGN1P10-201ENST00000474557 CYP4F8P98187 520 aa5.71□□□□□ -1.5
HMGN1P10-201ENST00000474557 NR1I3Q14994 352 aa5.71□□□□□ -1.5
HMGN1P10-201ENST00000474557 SAPCD2Q86UD0 394 aa5.71□□□□□ -1.5
HMGN1P10-201ENST00000474557 EAF1Q96JC9 268 aaPredicted RBP5.71□□□□□ -1.5
HMGN1P10-201ENST00000474557 PLCD4Q9BRC7 762 aa5.71□□□□□ -1.5
HMGN1P10-201ENST00000474557 GFRA2O00451 464 aa5.7□□□□□ -1.5
HMGN1P10-201ENST00000474557 PLATP00750 562 aa5.7□□□□□ -1.5
HMGN1P10-201ENST00000474557 CDK8P49336 464 aa5.7□□□□□ -1.5
HMGN1P10-201ENST00000474557 B4GALNT3Q6L9W6 998 aa5.7□□□□□ -1.5
HMGN1P10-201ENST00000474557 PHLDB3Q6NSJ2 640 aa5.7□□□□□ -1.5
HMGN1P10-201ENST00000474557 SYTL5Q8TDW5 730 aaPredicted RBP5.7□□□□□ -1.5
HMGN1P10-201ENST00000474557 CDK5RAP1Q96SZ6 601 aaKnown RBP5.7□□□□□ -1.5
HMGN1P10-201ENST00000474557 FOXP3Q9BZS1 431 aa5.7□□□□□ -1.5
HMGN1P10-201ENST00000474557 VPS11Q9H270 941 aa5.7□□□□□ -1.5
HMGN1P10-201ENST00000474557 SERPINA10Q9UK55 444 aa5.7□□□□□ -1.5
HMGN1P10-201ENST00000474557 TCFL5Q9UL49 500 aa5.7□□□□□ -1.5
HMGN1P10-201ENST00000474557 SHISA3A0PJX4 238 aa5.69□□□□□ -1.5
HMGN1P10-201ENST00000474557 MAPKAPK2P49137 400 aa5.69□□□□□ -1.5
HMGN1P10-201ENST00000474557 FOXO4P98177 505 aa5.69□□□□□ -1.5
HMGN1P10-201ENST00000474557 ZNF200P98182 395 aaPredicted RBP5.69□□□□□ -1.5
HMGN1P10-201ENST00000474557 CARFQ8N187 725 aa5.69□□□□□ -1.5
HMGN1P10-201ENST00000474557 TSC22D4Q9Y3Q8 395 aa5.69□□□□□ -1.5
HMGN1P10-201ENST00000474557 GIPC1O14908 333 aa5.68□□□□□ -1.5
HMGN1P10-201ENST00000474557 PRKCAP17252 672 aa5.68□□□□□ -1.5
HMGN1P10-201ENST00000474557 ENDOUP21128 410 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms