RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 XRN1Q8IZH2 1706 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 UTYO14607 1347 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 STRCP1A6NGW2 1772 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 ZNF609O15014 1411 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 PLCD1P51178 756 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 USP14P54578 494 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 FOXO4P98177 505 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 SLC7A5Q01650 507 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 PI16Q6UXB8 463 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 MMS19Q96T76 1030 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 ISCA1Q9BUE6 129 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 DONSONQ9NYP3 566 aa8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 LUC7L2Q9Y383 392 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 EPN1Q9Y6I3 576 aaPredicted RBP8.3□□□□□ -1.08
SYNPO2-203ENST00000434046 MROH5Q6ZUA9 1318 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 BTBD18B2RXH4 712 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 RPS6KA5O75582 802 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 ABL1P00519 1130 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 TRIM21P19474 475 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 ARHGAP25P42331 645 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 PAFAH1B1P43034 410 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 FXR1P51114 621 aaKnown RBP eCLIP8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 EXOSC10Q01780 885 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 SPA17Q15506 151 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 ZMYM1Q5SVZ6 1142 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 CFAP58Q5T655 872 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 FOXP4Q8IVH2 680 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 DIS3L2Q8IYB7 885 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 CCDC24Q8N4L8 307 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 TTLL11Q8NHH1 800 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 RPGRQ92834 1020 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 PPANQ9NQ55 473 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 ZNF532Q9HCE3 1301 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 B4E1Z4 1266 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 MARCH6O60337 910 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 PDE6BP35913 854 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 PHKA1P46020 1223 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 HLTFQ14527 1009 aaKnown RBP eCLIP8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 EEF2KMTQ96G04 330 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 NYXQ9GZU5 481 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 HSD3B7Q9H2F3 369 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 MAST3O60307 1309 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 CDHR2Q9BYE9 1310 aa8.29□□□□□ -1.08
SYNPO2-203ENST00000434046 E7EVH7 732 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 PPP6R2O75170 966 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 KCNQ4P56696 695 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 WTAPQ15007 396 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 SPATA1Q5VX52 437 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 RESP18Q5W5W9 173 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 SH2D3CQ8N5H7 860 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 KRT23Q9C075 422 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 BLZF1Q9H2G9 400 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 CNNM2Q9H8M5 875 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 CCNL1Q9UK58 526 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 CEP131Q9UPN4 1083 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 A0A1B0GUA9 196 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 SYF2O95926 243 aaKnown RBP8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 FGAP02671 866 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 ATP1A1P05023 1023 aaKnown RBP8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 CYP19A1P11511 503 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 KIF5AQ12840 1032 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 CMTR1Q8N1G2 835 aaKnown RBP8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 SPATA5Q8NB90 893 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 EHBP1Q8NDI1 1231 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 PLCD4Q9BRC7 762 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 ARMT1Q9H993 441 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 ERVV-1B6SEH8 477 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 CHUKO15111 745 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 ZNF185O15231 689 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 KIF1CO43896 1103 aaKnown RBP8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 CYLC1P35663 651 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 PEX19P40855 299 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 TBX2Q13207 712 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 NKX1-1Q15270 411 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 OSBP2Q969R2 916 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 NFAT5O94916 1531 aa8.28□□□□□ -1.08
SYNPO2-203ENST00000434046 TOPAZ1Q8N9V7 1692 aa8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 GOLGA8KD6RF30 607 aa8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 M0R2C6 588 aa8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 GNAT2P19087 354 aa8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 RFX5P48382 616 aaPredicted RBP8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 PSEN1P49768 467 aa8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 GUCY2FP51841 1108 aa8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 RNASE9P60153 205 aaKnown RBP8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 KRT83P78385 493 aa8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 TRIM28Q13263 835 aaKnown RBP8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 NR1I3Q14994 352 aa8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 SLC4A8Q2Y0W8 1093 aa8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 SWT1Q5T5J6 900 aaKnown RBP8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 CHP1Q99653 195 aa8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 MKNK2Q9HBH9 465 aa8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 SEC31BQ9NQW1 1179 aa8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 ANGEL1Q9UNK9 670 aaKnown RBP8.27□□□□□ -1.08
SYNPO2-203ENST00000434046 MAGEB6P1A0A0J9YX57 407 aa8.27□□□□□ -1.09
SYNPO2-203ENST00000434046 EIF3HO15372 352 aaKnown RBP eCLIP8.27□□□□□ -1.09
SYNPO2-203ENST00000434046 PDE6AP16499 860 aa8.27□□□□□ -1.09
SYNPO2-203ENST00000434046 CXCR5P32302 372 aa8.27□□□□□ -1.09
SYNPO2-203ENST00000434046 ELF1P32519 619 aa8.27□□□□□ -1.09
SYNPO2-203ENST00000434046 VAV2P52735 878 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms