RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 APPBP2Q92624 585 aa9.13□□□□□ -0.95
HMGB1P32-201ENST00000425971 MEGF10Q96KG7 1140 aa9.13□□□□□ -0.95
HMGB1P32-201ENST00000425971 YIPF2Q9BWQ6 316 aa9.13□□□□□ -0.95
HMGB1P32-201ENST00000425971 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.13□□□□□ -0.95
HMGB1P32-201ENST00000425971 LEMD3Q9Y2U8 911 aa9.13□□□□□ -0.95
HMGB1P32-201ENST00000425971 KDM5BQ9UGL1 1544 aa9.13□□□□□ -0.95
HMGB1P32-201ENST00000425971 IQSEC2Q5JU85 1478 aa9.13□□□□□ -0.95
HMGB1P32-201ENST00000425971 CD109Q6YHK3 1445 aa9.13□□□□□ -0.95
HMGB1P32-201ENST00000425971 CDC45O75419 566 aa9.12□□□□□ -0.95
HMGB1P32-201ENST00000425971 SLITRK5O94991 958 aa9.12□□□□□ -0.95
HMGB1P32-201ENST00000425971 NFICP08651 508 aa9.12□□□□□ -0.95
HMGB1P32-201ENST00000425971 ARMC10Q8N2F6 343 aa9.12□□□□□ -0.95
HMGB1P32-201ENST00000425971 VWCEQ96DN2 955 aa9.12□□□□□ -0.95
HMGB1P32-201ENST00000425971 MYRFLQ96LU7 910 aa9.12□□□□□ -0.95
HMGB1P32-201ENST00000425971 MIPEPQ99797 713 aa9.12□□□□□ -0.95
HMGB1P32-201ENST00000425971 KLHL25Q9H0H3 589 aa9.12□□□□□ -0.95
HMGB1P32-201ENST00000425971 CEP131Q9UPN4 1083 aa9.12□□□□□ -0.95
HMGB1P32-201ENST00000425971 PTCH2Q9Y6C5 1203 aa9.12□□□□□ -0.95
HMGB1P32-201ENST00000425971 WDR7Q9Y4E6 1490 aa9.11□□□□□ -0.95
HMGB1P32-201ENST00000425971 DYNC1LI2O43237 492 aaPredicted RBP9.11□□□□□ -0.95
HMGB1P32-201ENST00000425971 CBFA2T2O43439 604 aa9.11□□□□□ -0.95
HMGB1P32-201ENST00000425971 ADCY3O60266 1144 aa9.11□□□□□ -0.95
HMGB1P32-201ENST00000425971 NCLP19338 710 aaKnown RBP9.11□□□□□ -0.95
HMGB1P32-201ENST00000425971 KCNMA1Q12791 1236 aa9.11□□□□□ -0.95
HMGB1P32-201ENST00000425971 AXDND1Q5T1B0 1012 aaPredicted RBP9.11□□□□□ -0.95
HMGB1P32-201ENST00000425971 LETMD1Q6P1Q0 360 aa9.11□□□□□ -0.95
HMGB1P32-201ENST00000425971 HOMER1Q86YM7 354 aa9.11□□□□□ -0.95
HMGB1P32-201ENST00000425971 HAUS7Q99871 368 aa9.11□□□□□ -0.95
HMGB1P32-201ENST00000425971 SPATA9Q9BWV2 254 aa9.11□□□□□ -0.95
HMGB1P32-201ENST00000425971 WRNQ14191 1432 aaPredicted RBP eCLIP9.11□□□□□ -0.95
HMGB1P32-201ENST00000425971 TNIKQ9UKE5 1360 aa9.11□□□□□ -0.95
HMGB1P32-201ENST00000425971 ARAP3Q8WWN8 1544 aa9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 CFAP43Q8NDM7 1665 aa9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 ANKRD34BA5PLL1 514 aa9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 TP53P04637 393 aaPredicted RBP9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 EPHX1P07099 455 aa9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 NAT2P11245 290 aa9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 MAP4P27816 1152 aaKnown RBP9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 MAP7Q14244 749 aa9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 NBPF12Q5TAG4 269 aaPredicted RBP9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 KIAA0907Q7Z7F0 614 aaPredicted RBP9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 TXNRD3Q86VQ6 643 aa9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 ZNF513Q8N8E2 541 aaPredicted RBP9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 UTP4Q969X6 686 aaKnown RBP9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 SGSM3Q96HU1 749 aa9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 ZNF512BQ96KM6 892 aaPredicted RBP9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 KREMEN1Q96MU8 473 aa9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 FAM86C1Q9NVL1 165 aa9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 UACAQ9BZF9 1416 aa9.1□□□□□ -0.95
HMGB1P32-201ENST00000425971 IQCA1LA6NCM1 817 aa9.09□□□□□ -0.95
HMGB1P32-201ENST00000425971 CLSTN1O94985 981 aa9.09□□□□□ -0.95
HMGB1P32-201ENST00000425971 BMP3P12645 472 aa9.09□□□□□ -0.95
HMGB1P32-201ENST00000425971 RNF4P78317 190 aa9.09□□□□□ -0.95
HMGB1P32-201ENST00000425971 LONRF2Q1L5Z9 754 aa9.09□□□□□ -0.95
HMGB1P32-201ENST00000425971 ANKRD39Q53RE8 183 aa9.09□□□□□ -0.95
HMGB1P32-201ENST00000425971 DCAF15Q66K64 600 aa9.09□□□□□ -0.95
HMGB1P32-201ENST00000425971 FAM20CQ8IXL6 584 aa9.09□□□□□ -0.95
HMGB1P32-201ENST00000425971 CCDC144CPQ8IYA2 1237 aa9.09□□□□□ -0.95
HMGB1P32-201ENST00000425971 LRRC47Q8N1G4 583 aaKnown RBP9.09□□□□□ -0.95
HMGB1P32-201ENST00000425971 RIN3Q8TB24 985 aa9.09□□□□□ -0.95
HMGB1P32-201ENST00000425971 PRDM10Q9NQV6 1147 aa9.09□□□□□ -0.95
HMGB1P32-201ENST00000425971 C1GALT1Q9NS00 363 aa9.09□□□□□ -0.95
HMGB1P32-201ENST00000425971 SHOXO15266 292 aa9.08□□□□□ -0.96
HMGB1P32-201ENST00000425971 HSP90B1P14625 803 aaKnown RBP9.08□□□□□ -0.96
HMGB1P32-201ENST00000425971 C16orf86Q6ZW13 317 aa9.08□□□□□ -0.96
HMGB1P32-201ENST00000425971 CDH24Q86UP0 819 aa9.08□□□□□ -0.96
HMGB1P32-201ENST00000425971 ZSWIM2Q8NEG5 633 aa9.08□□□□□ -0.96
HMGB1P32-201ENST00000425971 RNF141Q8WVD5 230 aa9.08□□□□□ -0.96
HMGB1P32-201ENST00000425971 SSBP4Q9BWG4 385 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P32-201ENST00000425971 ASPNQ9BXN1 380 aa9.08□□□□□ -0.96
HMGB1P32-201ENST00000425971 MKRN2Q9H000 416 aaKnown RBP9.08□□□□□ -0.96
HMGB1P32-201ENST00000425971 LGR6Q9HBX8 967 aa9.08□□□□□ -0.96
HMGB1P32-201ENST00000425971 PREX1Q8TCU6 1659 aa9.07□□□□□ -0.96
HMGB1P32-201ENST00000425971 FAM153BP0C7A2 387 aa9.07□□□□□ -0.96
HMGB1P32-201ENST00000425971 ETV3P41162 512 aa9.07□□□□□ -0.96
HMGB1P32-201ENST00000425971 GSK3AP49840 483 aa9.07□□□□□ -0.96
HMGB1P32-201ENST00000425971 RASSF7Q02833 373 aa9.07□□□□□ -0.96
HMGB1P32-201ENST00000425971 TMEM67Q5HYA8 995 aa9.07□□□□□ -0.96
HMGB1P32-201ENST00000425971 HEATR6Q6AI08 1181 aaKnown RBP9.07□□□□□ -0.96
HMGB1P32-201ENST00000425971 ZBTB38Q8NAP3 1195 aaPredicted RBP9.07□□□□□ -0.96
HMGB1P32-201ENST00000425971 FBXL18Q96ME1 805 aa9.07□□□□□ -0.96
HMGB1P32-201ENST00000425971 APBA2Q99767 749 aa9.07□□□□□ -0.96
HMGB1P32-201ENST00000425971 FAM95CA0A1B0GW59 222 aa9.06□□□□□ -0.96
HMGB1P32-201ENST00000425971 A0A1W2PQU0 124 aa9.06□□□□□ -0.96
HMGB1P32-201ENST00000425971 AGRPO00253 132 aa9.06□□□□□ -0.96
HMGB1P32-201ENST00000425971 RAPGEF3O95398 923 aa9.06□□□□□ -0.96
HMGB1P32-201ENST00000425971 EOMESO95936 686 aa9.06□□□□□ -0.96
HMGB1P32-201ENST00000425971 RXRBP28702 533 aa9.06□□□□□ -0.96
HMGB1P32-201ENST00000425971 HSPA1LP34931 641 aa9.06□□□□□ -0.96
HMGB1P32-201ENST00000425971 CDK5R2Q13319 367 aa9.06□□□□□ -0.96
HMGB1P32-201ENST00000425971 TOP6BLQ8N6T0 577 aa9.06□□□□□ -0.96
HMGB1P32-201ENST00000425971 APEX2Q9UBZ4 518 aa9.06□□□□□ -0.96
HMGB1P32-201ENST00000425971 ZNF451Q9Y4E5 1061 aa9.06□□□□□ -0.96
HMGB1P32-201ENST00000425971 FRMPD1Q5SYB0 1578 aa9.06□□□□□ -0.96
HMGB1P32-201ENST00000425971 PTPRTO14522 1441 aa9.05□□□□□ -0.96
HMGB1P32-201ENST00000425971 AUHQ13825 339 aaKnown RBP9.05□□□□□ -0.96
HMGB1P32-201ENST00000425971 TKFCQ3LXA3 575 aa9.05□□□□□ -0.96
HMGB1P32-201ENST00000425971 SV2CQ496J9 727 aa9.05□□□□□ -0.96
HMGB1P32-201ENST00000425971 ZC3H12BQ5HYM0 836 aaKnown RBP9.05□□□□□ -0.96
HMGB1P32-201ENST00000425971 C7orf61Q8IZ16 206 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms