RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 NAA16Q6N069 864 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-201ENST00000393077 TSHZ1Q6ZSZ6 1077 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 SPATA24Q86W54 205 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 TRIML1Q8N9V2 468 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 SNRNP27Q8WVK2 155 aaKnown RBP8.45□□□□□ -1.06
VTI1A-201ENST00000393077 TRIM11Q96F44 468 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 HIC2Q96JB3 615 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 MAF1Q9H063 256 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 DLGAP2Q9P1A6 1054 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 INTUQ9ULD6 942 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 C2CD2Q9Y426 696 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 ADGRB3O60242 1522 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 ABCA6Q8N139 1617 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 SOWAHDA6NJG2 315 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 GIGYF1O75420 1035 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 FAM107AO95990 144 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 MYL1P05976 194 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 SKIP12755 728 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 CCND1P24385 295 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 PDE1CQ14123 709 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 CFAP157Q5JU67 520 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 CYP26C1Q6V0L0 522 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 NOA1Q8NC60 698 aaKnown RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 PGBD1Q96JS3 809 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 CCDC85AQ96PX6 553 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 PLEKHG4BQ96PX9 1271 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 RAB3IPQ96QF0 476 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 PLEKHF1Q96S99 279 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 SLC39A2Q9NP94 309 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 BZW2Q9Y6E2 419 aaKnown RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 MACROD2A1Z1Q3 448 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 TROVE2P10155 538 aaKnown RBP eCLIP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 VCAM1P19320 739 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 SAFBQ15424 915 aaKnown RBP eCLIP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 SLC5A9Q2M3M2 681 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 MIS18BP1Q6P0N0 1132 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 MAP7D3Q8IWC1 876 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 SIRT2Q8IXJ6 389 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 MORC4Q8TE76 937 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 LUC7LQ9NQ29 371 aaKnown RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 CHPF2Q9P2E5 772 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 KAT6BQ8WYB5 2073 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 ANKRD33BA6NCL7 494 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 IKBKBO14920 756 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 VIL1P09327 827 aaKnown RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 SCTRP47872 440 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 ACCSLQ4AC99 568 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 G2E3Q7L622 706 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 YTHDF3Q7Z739 585 aaKnown RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 VSIG1Q86XK7 387 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 ARHGAP18Q8N392 663 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 MAB21L3Q8N8X9 362 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 MYCBPAPQ8TBZ2 947 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 MPHOSPH6Q99547 160 aaKnown RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 GALNT8Q9NY28 637 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 DBF4Q9UBU7 674 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 BLOC1S6Q9UL45 172 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 RBM8AQ9Y5S9 174 aaKnown RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 ERBB3P21860 1342 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 SSH2Q76I76 1423 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 SUPT3HO75486 399 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 MARCKSP29966 332 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 INTS8Q75QN2 995 aaKnown RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 OR8K1Q8NGG5 319 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 STMN2Q93045 179 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 ZNF653Q96CK0 615 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 CYFIP2Q96F07 1278 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 LGR6Q9HBX8 967 aa8.44□□□□□ -1.06
VTI1A-201ENST00000393077 FAF1Q9UNN5 650 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-201ENST00000393077 LMTK2Q8IWU2 1503 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 HMGB1P1B2RPK0 211 aaPredicted RBP8.43□□□□□ -1.06
VTI1A-201ENST00000393077 LARGE1O95461 756 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 MDH1P40925 334 aaKnown RBP8.43□□□□□ -1.06
VTI1A-201ENST00000393077 AARSP49588 968 aaKnown RBP eCLIP8.43□□□□□ -1.06
VTI1A-201ENST00000393077 MPP3Q13368 585 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 KRT71Q3SY84 523 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.43□□□□□ -1.06
VTI1A-201ENST00000393077 EMBQ6PCB8 327 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 Q6ZUG5 572 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 NCAPG2Q86XI2 1143 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 IFNL2Q8IZJ0 200 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 LRRC45Q96CN5 670 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 TMOD4Q9NZQ9 345 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 LMCD1Q9NZU5 365 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 CTTNBP2NLQ9P2B4 639 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 HDAC6Q9UBN7 1215 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 WWC3Q9ULE0 1092 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 SBNO1A3KN83 1393 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 PTGISQ16647 500 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 C16orf87Q6PH81 154 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 NAF1Q96HR8 494 aaKnown RBP8.43□□□□□ -1.06
VTI1A-201ENST00000393077 FAM81BQ96LP2 452 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 CHMP2BQ9UQN3 213 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 DAAM1Q9Y4D1 1078 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 SYF2O95926 243 aaKnown RBP8.43□□□□□ -1.06
VTI1A-201ENST00000393077 WDR93Q6P2C0 686 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 MAGEC3Q8TD91 643 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 USP28Q96RU2 1077 aa8.43□□□□□ -1.06
VTI1A-201ENST00000393077 DNAAF2Q9NVR5 837 aaKnown RBP8.43□□□□□ -1.06
VTI1A-201ENST00000393077 UTP6Q9NYH9 597 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms