RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 FRMD4BQ9Y2L6 1034 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 SCINQ9Y6U3 715 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 EPG5Q9HCE0 2579 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 DCDC2BA2VCK2 349 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 PCSK2P16519 638 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 EPS15P42566 896 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 TXKP42681 527 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 EIF1AXP47813 144 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 HUNKP57058 714 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 COL9A2Q14055 689 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 CCDC96Q2M329 555 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 ICE2Q659A1 982 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 PNMA8AQ86V59 439 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 TTLL6Q8N841 843 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 NEDD1Q8NHV4 660 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 SNRNP27Q8WVK2 155 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 NUDT16Q96DE0 195 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 C8orf48Q96LL4 319 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 TSPAN18Q96SJ8 248 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 OSBPL2Q9H1P3 480 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 BRD7Q9NPI1 651 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 TPX2Q9ULW0 747 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 G3BP2Q9UN86 482 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 KCNH4Q9UQ05 1017 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 BDP1A6H8Y1 2624 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 SCN4AP35499 1836 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 IRS2Q9Y4H2 1338 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 EFSO43281 561 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 RPLP1P05386 114 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 VIL1P09327 827 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 MAPTP10636 758 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 FGFR3P22607 806 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 ITGAEP38570 1179 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 TNP2Q05952 138 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 FZD5Q13467 585 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 UBE4AQ14139 1066 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 ZRSR2Q15696 482 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 AXDND1Q5T1B0 1012 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 MPRIPQ6WCQ1 1025 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 ARHGEF25Q86VW2 580 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 JAZF1Q86VZ6 243 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 RPUSD2Q8IZ73 545 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 ABHD17AQ96GS6 310 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 FRMD6Q96NE9 622 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 ANP32EQ9BTT0 268 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 TMX4Q9H1E5 349 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 CCSER2Q9H7U1 834 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 RALYQ9UKM9 306 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 PRKAB1Q9Y478 270 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 VPS8Q8N3P4 1428 aa4.36□□□□□ -1.71
ECHDC1-205ENST00000368295 GOLIM4O00461 696 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 PPP1R12AO14974 1030 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 NDUFB5O43674 189 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 BNIP3LO60238 219 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 CD53P19397 219 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 MZF1P28698 734 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 INPP5BP32019 993 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 MRPL58Q14197 206 aaKnown RBP4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 BMS1Q14692 1282 aaKnown RBP4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 FAM26DQ5JW98 314 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 ZKSCAN2Q63HK3 967 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 MAFAQ8NHW3 353 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 EDEM1Q92611 657 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 PAGR1Q9BTK6 254 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 SEMA6BQ9H3T3 888 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 MARK1Q9P0L2 795 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 FEZ2Q9UHY8 353 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 ANAPC4Q9UJX5 808 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 CDH23Q9H251 3354 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 SETXQ7Z333 2677 aaKnown RBP4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 TRPM7Q96QT4 1865 aa4.35□□□□□ -1.71
ECHDC1-205ENST00000368295 GPR25O00155 361 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 ENPP3O14638 875 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 VDRP11473 427 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 ITGB7P26010 798 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 NFE2L2Q16236 605 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 NT5DC4Q86YG4 428 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 C2CD5Q86YS7 1000 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 TRPM4Q8TD43 1214 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 JDP2Q8WYK2 163 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 MKL1Q969V6 931 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 IL17RAQ96F46 866 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 NECAB3Q96P71 396 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 INO80BQ9C086 356 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 TAOK3Q9H2K8 898 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 CAPN10Q9HC96 672 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 C11orf16Q9NQ32 467 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 NRBP1Q9UHY1 535 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 NSFL1CQ9UNZ2 370 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 TRIM17Q9Y577 477 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 RPGRIP1LQ68CZ1 1315 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 POLR3AO14802 1390 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 CARMIL3Q8ND23 1372 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 OPLAHO14841 1288 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 ZBTB39O15060 712 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 FZD6O60353 706 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 PDGFAP04085 211 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 COL6A1P12109 1028 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 DEKP35659 375 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 USP5P45974 858 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms