RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 SLFN14P0C7P3 912 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 PCP11498 1178 aaKnown RBP13.01□□□□□ -0.33
COPA-202ENST00000368069 NCAPH2Q6IBW4 605 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 EEF2KMTQ96G04 330 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 SOS2Q07890 1332 aaPredicted RBP13.01□□□□□ -0.33
COPA-202ENST00000368069 GOLGA6CA6NDK9 693 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 CHMP2AO43633 222 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 GOLGA6DP0CG33 693 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 RBL2Q08999 1139 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 HLFQ16534 295 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 USP37Q86T82 979 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 MB21D2Q8IYB1 491 aaPredicted RBP13.01□□□□□ -0.33
COPA-202ENST00000368069 ARFGAP2Q8N6H7 521 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 RGS22Q8NE09 1264 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 ENOX1Q8TC92 643 aaKnown RBP13.01□□□□□ -0.33
COPA-202ENST00000368069 GOLGA6AQ9NYA3 693 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 PHLPP2Q6ZVD8 1323 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 LMTK3Q96Q04 1460 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 CHGBP05060 677 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 HOOK3Q86VS8 718 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 RASGRP4Q8TDF6 673 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 VEZTQ9HBM0 779 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 GOLGA6BA6NDN3 693 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 SLC1A4P43007 532 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 SND1Q7KZF4 910 aaKnown RBP eCLIP13.01□□□□□ -0.337e-7■■□□□ 11.7
COPA-202ENST00000368069 CYB5R4Q7L1T6 521 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 OGFOD1Q8N543 542 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 ZBTB21Q9ULJ3 1066 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 VWDEQ8N2E2 1590 aa13.01□□□□□ -0.33
COPA-202ENST00000368069 CYP2D7A0A087X1C5 515 aa13□□□□□ -0.33
COPA-202ENST00000368069 SMIM23A6NLE4 172 aa13□□□□□ -0.33
COPA-202ENST00000368069 HAUS4Q9H6D7 363 aa13□□□□□ -0.33
COPA-202ENST00000368069 HDAC9Q9UKV0 1011 aa13□□□□□ -0.33
COPA-202ENST00000368069 SRPRBQ9Y5M8 271 aaKnown RBP13□□□□□ -0.33
COPA-202ENST00000368069 EPN1Q9Y6I3 576 aaPredicted RBP13□□□□□ -0.33
COPA-202ENST00000368069 TLDC2A0PJX2 215 aa13□□□□□ -0.33
COPA-202ENST00000368069 SEC31AO94979 1220 aaKnown RBP13□□□□□ -0.33
COPA-202ENST00000368069 KLHL30Q0D2K2 578 aa13□□□□□ -0.33
COPA-202ENST00000368069 ZRSR2Q15696 482 aaKnown RBP13□□□□□ -0.33
COPA-202ENST00000368069 SFMBT2Q5VUG0 894 aa13□□□□□ -0.33
COPA-202ENST00000368069 NEK8Q86SG6 692 aa13□□□□□ -0.33
COPA-202ENST00000368069 UBLCP1Q8WVY7 318 aaPredicted RBP13□□□□□ -0.33
COPA-202ENST00000368069 GLT8D2Q9H1C3 349 aa13□□□□□ -0.33
COPA-202ENST00000368069 ATP8A2Q9NTI2 1148 aa13□□□□□ -0.33
COPA-202ENST00000368069 FRMD4BQ9Y2L6 1034 aa13□□□□□ -0.33
COPA-202ENST00000368069 USP32Q8NFA0 1604 aa13□□□□□ -0.33
COPA-202ENST00000368069 NEURL4Q96JN8 1562 aa13□□□□□ -0.33
COPA-202ENST00000368069 NEDD4P46934 1319 aa13□□□□□ -0.33
COPA-202ENST00000368069 FOXO4P98177 505 aa13□□□□□ -0.33
COPA-202ENST00000368069 MFSD14BQ5SR56 506 aa13□□□□□ -0.33
COPA-202ENST00000368069 RESP18Q5W5W9 173 aa13□□□□□ -0.33
COPA-202ENST00000368069 AEBP2Q6ZN18 517 aaPredicted RBP13□□□□□ -0.33
COPA-202ENST00000368069 SLC35F6Q8N357 371 aa13□□□□□ -0.33
COPA-202ENST00000368069 OTUD6BQ8N6M0 293 aa13□□□□□ -0.33
COPA-202ENST00000368069 RABGGTAQ92696 567 aa13□□□□□ -0.33
COPA-202ENST00000368069 SCLT1Q96NL6 688 aa13□□□□□ -0.33
COPA-202ENST00000368069 SELENOSQ9BQE4 189 aa13□□□□□ -0.33
COPA-202ENST00000368069 INCENPQ9NQS7 918 aa13□□□□□ -0.33
COPA-202ENST00000368069 PKD2L1Q9P0L9 805 aa13□□□□□ -0.33
COPA-202ENST00000368069 PPLO60437 1756 aa13□□□□□ -0.33
COPA-202ENST00000368069 TRAPPC10P48553 1259 aa13□□□□□ -0.33
COPA-202ENST00000368069 IFT20Q8IY31 132 aa13□□□□□ -0.33
COPA-202ENST00000368069 ZNF609O15014 1411 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 FRMPD2Q68DX3 1309 aaPredicted RBP12.99□□□□□ -0.33
COPA-202ENST00000368069 FRMPD1Q5SYB0 1578 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 ERVV-1B6SEH8 477 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 CALUO43852 315 aaPredicted RBP12.99□□□□□ -0.33
COPA-202ENST00000368069 NCBP1Q09161 790 aaKnown RBP12.99□□□□□ -0.33
COPA-202ENST00000368069 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
COPA-202ENST00000368069 EPSTI1Q96J88 318 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 RASSF4Q9H2L5 321 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 CDC23Q9UJX2 597 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 RPGRIP1Q96KN7 1286 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 SLC39A2Q9NP94 309 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 SNAP23O00161 211 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 GJC1P36383 396 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 GALNT17Q6IS24 598 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 CCDC91Q7Z6B0 441 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 RABEP2Q9H5N1 569 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 TAF6LQ9Y6J9 622 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 ZNF804BA4D1E1 1349 aa12.99□□□□□ -0.33
COPA-202ENST00000368069 SOWAHDA6NJG2 315 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 NBPF26B4DH59 902 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 HPDP32754 393 aaPredicted RBP12.98□□□□□ -0.33
COPA-202ENST00000368069 WDR78Q5VTH9 848 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 NBPF10Q6P3W6 841 aaKnown RBP12.98□□□□□ -0.33
COPA-202ENST00000368069 SRGAP1Q7Z6B7 1085 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 KLHL7Q8IXQ5 586 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 NBPF15Q8N660 670 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 IQCDQ96DY2 449 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 CD163L1Q9NR16 1453 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 DEPDC5O75140 1603 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 CDC25AP30304 524 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 USPL1Q5W0Q7 1092 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 ATG9AQ7Z3C6 839 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 TRIM58Q8NG06 486 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 CCDC26Q8TAB7 109 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 TBC1D22AQ8WUA7 517 aa12.98□□□□□ -0.33
COPA-202ENST00000368069 DNM3Q9UQ16 869 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms