RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 MKL1Q969V6 931 aa20.36■□□□□ 0.85
BRCC3-202ENST00000340647 CEP95Q96GE4 821 aa20.36■□□□□ 0.85
BRCC3-202ENST00000340647 NUP88Q99567 741 aaPredicted RBP20.36■□□□□ 0.85
BRCC3-202ENST00000340647 MKNK2Q9HBH9 465 aa20.36■□□□□ 0.85
BRCC3-202ENST00000340647 HMX1Q9NP08 348 aaPredicted RBP20.36■□□□□ 0.85
BRCC3-202ENST00000340647 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.36■□□□□ 0.85
BRCC3-202ENST00000340647 DNAH12Q6ZR08 3092 aa20.36■□□□□ 0.85
BRCC3-202ENST00000340647 COBLO75128 1261 aa20.35■□□□□ 0.85
BRCC3-202ENST00000340647 TFRCP02786 760 aaKnown RBP20.35■□□□□ 0.85
BRCC3-202ENST00000340647 ERCC3P19447 782 aa20.35■□□□□ 0.85
BRCC3-202ENST00000340647 PPARAQ07869 468 aa20.35■□□□□ 0.85
BRCC3-202ENST00000340647 LRRFIP1Q32MZ4 808 aaKnown RBP20.35■□□□□ 0.85
BRCC3-202ENST00000340647 FAM83BQ5T0W9 1011 aa20.35■□□□□ 0.85
BRCC3-202ENST00000340647 LHX8Q68G74 356 aa20.35■□□□□ 0.85
BRCC3-202ENST00000340647 CHD1LQ86WJ1 897 aa20.35■□□□□ 0.85
BRCC3-202ENST00000340647 RWDD1Q9H446 243 aaPredicted RBP20.35■□□□□ 0.85
BRCC3-202ENST00000340647 SH2D4AQ9H788 454 aa20.35■□□□□ 0.85
BRCC3-202ENST00000340647 MTMR4Q9NYA4 1195 aa20.35■□□□□ 0.85
BRCC3-202ENST00000340647 OGDHLQ9ULD0 1010 aa20.35■□□□□ 0.85
BRCC3-202ENST00000340647 F5H6K3 240 aa20.34■□□□□ 0.85
BRCC3-202ENST00000340647 NDUFB10O96000 172 aa20.34■□□□□ 0.85
BRCC3-202ENST00000340647 ZKSCAN1P17029 563 aaPredicted RBP20.34■□□□□ 0.85
BRCC3-202ENST00000340647 KLRC3Q07444 240 aa20.34■□□□□ 0.85
BRCC3-202ENST00000340647 FAM47AQ5JRC9 791 aa20.34■□□□□ 0.85
BRCC3-202ENST00000340647 CHRDL2Q6WN34 429 aa20.34■□□□□ 0.85
BRCC3-202ENST00000340647 ZNF589Q86UQ0 364 aaPredicted RBP20.34■□□□□ 0.85
BRCC3-202ENST00000340647 SHCBP1Q8NEM2 672 aa20.34■□□□□ 0.85
BRCC3-202ENST00000340647 TRPV1Q8NER1 839 aa20.34■□□□□ 0.85
BRCC3-202ENST00000340647 PAWRQ96IZ0 340 aaKnown RBP20.34■□□□□ 0.85
BRCC3-202ENST00000340647 OSBPL3Q9H4L5 887 aa20.34■□□□□ 0.85
BRCC3-202ENST00000340647 CTDSPL2Q05D32 466 aa20.33■□□□□ 0.85
BRCC3-202ENST00000340647 WDR78Q5VTH9 848 aa20.33■□□□□ 0.85
BRCC3-202ENST00000340647 CCAR1Q8IX12 1150 aaKnown RBP20.33■□□□□ 0.85
BRCC3-202ENST00000340647 MB21D1Q8N884 522 aa20.33■□□□□ 0.85
BRCC3-202ENST00000340647 NEDD1Q8NHV4 660 aa20.33■□□□□ 0.85
BRCC3-202ENST00000340647 NAPBQ9H115 298 aa20.33■□□□□ 0.85
BRCC3-202ENST00000340647 HELLSQ9NRZ9 838 aa20.33■□□□□ 0.85
BRCC3-202ENST00000340647 CLIP2Q9UDT6 1046 aa20.33■□□□□ 0.85
BRCC3-202ENST00000340647 ZNF214Q9UL59 606 aaPredicted RBP20.33■□□□□ 0.85
BRCC3-202ENST00000340647 PPP1R9AQ9ULJ8 1098 aa20.33■□□□□ 0.85
BRCC3-202ENST00000340647 VWA5AO00534 786 aa20.32■□□□□ 0.84
BRCC3-202ENST00000340647 FGRP09769 529 aa20.32■□□□□ 0.84
BRCC3-202ENST00000340647 ADORA2AP29274 412 aa20.32■□□□□ 0.84
BRCC3-202ENST00000340647 NMIQ13287 307 aaPredicted RBP20.32■□□□□ 0.84
BRCC3-202ENST00000340647 ALX1Q15699 326 aa20.32■□□□□ 0.84
BRCC3-202ENST00000340647 TRMT44Q8IYL2 757 aaKnown RBP20.32■□□□□ 0.84
BRCC3-202ENST00000340647 ZNF444Q8N0Y2 327 aaPredicted RBP20.32■□□□□ 0.84
BRCC3-202ENST00000340647 GOPCQ9HD26 462 aa20.32■□□□□ 0.84
BRCC3-202ENST00000340647 IL17RBQ9NRM6 502 aa20.32■□□□□ 0.84
BRCC3-202ENST00000340647 RBM27Q9P2N5 1060 aaKnown RBP20.32■□□□□ 0.84
BRCC3-202ENST00000340647 ANAPC4Q9UJX5 808 aa20.32■□□□□ 0.84
BRCC3-202ENST00000340647 NACAP1Q9BZK3 213 aa20.31■□□□□ 0.84
BRCC3-202ENST00000340647 NBPF3Q9H094 633 aa20.31■□□□□ 0.84
BRCC3-202ENST00000340647 FGAP02671 866 aa20.3■□□□□ 0.84
BRCC3-202ENST00000340647 CAPN2P17655 700 aa20.3■□□□□ 0.84
BRCC3-202ENST00000340647 PDE4AP27815 886 aa20.3■□□□□ 0.84
BRCC3-202ENST00000340647 CYP2C19P33261 490 aa20.3■□□□□ 0.84
BRCC3-202ENST00000340647 NOVP48745 357 aa20.3■□□□□ 0.84
BRCC3-202ENST00000340647 TFAP4Q01664 338 aa20.3■□□□□ 0.84
BRCC3-202ENST00000340647 SAMD1Q6SPF0 538 aaPredicted RBP20.3■□□□□ 0.84
BRCC3-202ENST00000340647 RIOX2Q8IUF8 465 aa20.3■□□□□ 0.84
BRCC3-202ENST00000340647 LRRC47Q8N1G4 583 aaKnown RBP20.3■□□□□ 0.84
BRCC3-202ENST00000340647 DPF3Q92784 378 aa20.3■□□□□ 0.84
BRCC3-202ENST00000340647 PRO3102Q9H379 93 aa20.3■□□□□ 0.84
BRCC3-202ENST00000340647 ZBTB47Q9UFB7 747 aaPredicted RBP20.3■□□□□ 0.84
BRCC3-202ENST00000340647 RIPK3Q9Y572 518 aa20.3■□□□□ 0.84
BRCC3-202ENST00000340647 LAMA3Q16787 3333 aa20.3■□□□□ 0.84
BRCC3-202ENST00000340647 LAMA4Q16363 1823 aa20.3■□□□□ 0.84
BRCC3-202ENST00000340647 PFASO15067 1338 aa20.29■□□□□ 0.84
BRCC3-202ENST00000340647 MCM3APO60318 1980 aa20.29■□□□□ 0.84
BRCC3-202ENST00000340647 STRNO43815 780 aa20.29■□□□□ 0.84
BRCC3-202ENST00000340647 NMT2O60551 498 aa20.29■□□□□ 0.84
BRCC3-202ENST00000340647 HSPD1P10809 573 aaKnown RBP20.29■□□□□ 0.84
BRCC3-202ENST00000340647 PLS1Q14651 629 aa20.29■□□□□ 0.84
BRCC3-202ENST00000340647 MCMDC2Q4G0Z9 681 aa20.29■□□□□ 0.84
BRCC3-202ENST00000340647 RASGRP2Q7LDG7 609 aa20.29■□□□□ 0.84
BRCC3-202ENST00000340647 TICAM2Q86XR7 235 aa20.29■□□□□ 0.84
BRCC3-202ENST00000340647 ANKLE1Q8NAG6 615 aa20.29■□□□□ 0.84
BRCC3-202ENST00000340647 MROH8Q9H579 483 aa20.29■□□□□ 0.84
BRCC3-202ENST00000340647 IVNS1ABPQ9Y6Y0 642 aa20.29■□□□□ 0.84
BRCC3-202ENST00000340647 TTLL1O95922 423 aa20.28■□□□□ 0.84
BRCC3-202ENST00000340647 COL6A1P12109 1028 aa20.28■□□□□ 0.84
BRCC3-202ENST00000340647 CYBAP13498 195 aa20.28■□□□□ 0.84
BRCC3-202ENST00000340647 IRX6P78412 446 aaPredicted RBP20.28■□□□□ 0.84
BRCC3-202ENST00000340647 PDE4BQ07343 736 aa20.28■□□□□ 0.84
BRCC3-202ENST00000340647 NCAPG2Q86XI2 1143 aa20.28■□□□□ 0.84
BRCC3-202ENST00000340647 ABRAQ8N0Z2 381 aa20.28■□□□□ 0.84
BRCC3-202ENST00000340647 GMCL1P1Q8NEA9 526 aa20.28■□□□□ 0.84
BRCC3-202ENST00000340647 SLF1Q9BQI6 1058 aa20.28■□□□□ 0.84
BRCC3-202ENST00000340647 CWC22Q9HCG8 908 aaKnown RBP20.28■□□□□ 0.84
BRCC3-202ENST00000340647 RAD21O60216 631 aa20.27■□□□□ 0.84
BRCC3-202ENST00000340647 TSPY3P0CV98 308 aa20.27■□□□□ 0.84
BRCC3-202ENST00000340647 TSPY8P0CW00 308 aa20.27■□□□□ 0.84
BRCC3-202ENST00000340647 SDSP20132 328 aa20.27■□□□□ 0.84
BRCC3-202ENST00000340647 STAT3P40763 770 aa20.27■□□□□ 0.84
BRCC3-202ENST00000340647 OLFML2BQ68BL8 750 aa20.27■□□□□ 0.84
BRCC3-202ENST00000340647 ZNF287Q9HBT7 754 aa20.27■□□□□ 0.84
BRCC3-202ENST00000340647 SYNPO2Q9UMS6 1093 aa20.27■□□□□ 0.84
BRCC3-202ENST00000340647 COL6A3P12111 3177 aa20.26■□□□□ 0.83
BRCC3-202ENST00000340647 TRIM6-TRIM34B2RNG4 842 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms