RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 GNPTABQ3T906 1256 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 EGFLAMQ63HQ2 1017 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 CDC37L1Q7L3B6 337 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 SMYD4Q8IYR2 804 aaPredicted RBP2.92□□□□□ -1.94
CCDC30-201ENST00000340612 C19orf47Q8N9M1 422 aaKnown RBP2.92□□□□□ -1.94
CCDC30-201ENST00000340612 SMG8Q8ND04 991 aaKnown RBP2.92□□□□□ -1.94
CCDC30-201ENST00000340612 RIN3Q8TB24 985 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 FBLIM1Q8WUP2 373 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 FANCLQ9NW38 375 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 ADAM30Q9UKF2 790 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 SBNO2Q9Y2G9 1366 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 EIF4EBP3O60516 100 aaPredicted RBP2.92□□□□□ -1.94
CCDC30-201ENST00000340612 YARSP54577 528 aaKnown RBP2.92□□□□□ -1.94
CCDC30-201ENST00000340612 HNRNPUQ00839 825 aaKnown RBP eCLIP2.92□□□□□ -1.94
CCDC30-201ENST00000340612 IFRD2Q12894 506 aaPredicted RBP2.92□□□□□ -1.94
CCDC30-201ENST00000340612 RASGRF1Q13972 1273 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 SGO2Q562F6 1265 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 IQSEC2Q5JU85 1478 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 DCAF15Q66K64 600 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 EGFL6Q8IUX8 553 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.92□□□□□ -1.94
CCDC30-201ENST00000340612 MRPL41Q8IXM3 137 aaKnown RBP2.92□□□□□ -1.94
CCDC30-201ENST00000340612 DZIP1LQ8IYY4 767 aaKnown RBP2.92□□□□□ -1.94
CCDC30-201ENST00000340612 ABI1Q8IZP0 508 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 KDM2BQ8NHM5 1336 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 ZNF507Q8TCN5 953 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 UBL7Q96S82 380 aaPredicted RBP2.92□□□□□ -1.94
CCDC30-201ENST00000340612 CCDC113Q9H0I3 377 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 SUGCTQ9HAC7 445 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 TACC3Q9Y6A5 838 aa2.92□□□□□ -1.94
CCDC30-201ENST00000340612 WASHC2AQ641Q2 1341 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 NFICP08651 508 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 GBP1P32455 592 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 SSRP1Q08945 709 aaKnown RBP2.91□□□□□ -1.94
CCDC30-201ENST00000340612 CDK5R2Q13319 367 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 SQSTM1Q13501 440 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 C21orf62-AS1Q17RA5 79 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 ARMCX6Q7L4S7 300 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 SLFN12Q8IYM2 578 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 KRTAP9-3Q9BYQ3 159 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 AKTIPQ9H8T0 292 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 LOC102724159A0A0B4J2E5 919 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 SART1O43290 800 aaKnown RBP2.91□□□□□ -1.94
CCDC30-201ENST00000340612 GAS2O43903 313 aaKnown RBP2.91□□□□□ -1.94
CCDC30-201ENST00000340612 WNT11O96014 354 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 IGLV1-40P01703 118 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 SLC7A5Q01650 507 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 PWP2Q15269 919 aaKnown RBP2.91□□□□□ -1.94
CCDC30-201ENST00000340612 HSP90AB4PQ58FF6 505 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 ZNF648Q5T619 568 aaPredicted RBP2.91□□□□□ -1.94
CCDC30-201ENST00000340612 SLC6A19Q695T7 634 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 SLC51AQ86UW1 340 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 ZDHHC13Q8IUH4 622 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 TAB3Q8N5C8 712 aaPredicted RBP2.91□□□□□ -1.94
CCDC30-201ENST00000340612 ANP32BQ92688 251 aaKnown RBP2.91□□□□□ -1.94
CCDC30-201ENST00000340612 PPP1R14AQ96A00 147 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 FGD4Q96M96 766 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 MIPEPQ99797 713 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 SEMA6CQ9H3T2 930 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 PHAXQ9H814 394 aaKnown RBP2.91□□□□□ -1.94
CCDC30-201ENST00000340612 ZMYM5Q9UJ78 669 aa2.91□□□□□ -1.94
CCDC30-201ENST00000340612 ZNF214Q9UL59 606 aaPredicted RBP2.91□□□□□ -1.94
CCDC30-201ENST00000340612 RGS13O14921 159 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 SUSD5O60279 629 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 EPHX1P07099 455 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 USP11P51784 963 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 SLC10A6Q3KNW5 377 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 TKFCQ3LXA3 575 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 INTS3Q68E01 1043 aaKnown RBP2.9□□□□□ -1.94
CCDC30-201ENST00000340612 ANKRD34AQ69YU3 496 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 CDH24Q86UP0 819 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 DTX1Q86Y01 620 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 PPP1R13LQ8WUF5 828 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 CYB5D2Q8WUJ1 264 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 CCDC74BQ96LY2 380 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 PDCL3Q9H2J4 239 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 GSX1Q9H4S2 264 aaPredicted RBP2.9□□□□□ -1.94
CCDC30-201ENST00000340612 ACSS3Q9H6R3 686 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 APEX2Q9UBZ4 518 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 PTCH2Q9Y6C5 1203 aa2.9□□□□□ -1.94
CCDC30-201ENST00000340612 SYNGAP1Q96PV0 1343 aa2.9□□□□□ -1.95
CCDC30-201ENST00000340612 CNTNAP4Q9C0A0 1308 aa2.9□□□□□ -1.95
CCDC30-201ENST00000340612 LRP5O75197 1615 aa2.9□□□□□ -1.95
CCDC30-201ENST00000340612 CLEC3AO75596 197 aa2.9□□□□□ -1.95
CCDC30-201ENST00000340612 CST3P01034 146 aaPredicted RBP2.9□□□□□ -1.95
CCDC30-201ENST00000340612 FAM153BP0C7A2 387 aa2.9□□□□□ -1.95
CCDC30-201ENST00000340612 RXRBP28702 533 aa2.9□□□□□ -1.95
CCDC30-201ENST00000340612 CC2D1BQ5T0F9 858 aaKnown RBP2.9□□□□□ -1.95
CCDC30-201ENST00000340612 YOD1Q5VVQ6 348 aaPredicted RBP2.9□□□□□ -1.95
CCDC30-201ENST00000340612 EXOC8Q8IYI6 725 aa2.9□□□□□ -1.95
CCDC30-201ENST00000340612 NGEFQ8N5V2 710 aa2.9□□□□□ -1.95
CCDC30-201ENST00000340612 ADCY4Q8NFM4 1077 aa2.9□□□□□ -1.95
CCDC30-201ENST00000340612 DCAF11Q8TEB1 546 aa2.9□□□□□ -1.95
CCDC30-201ENST00000340612 GPATCH3Q96I76 525 aa2.9□□□□□ -1.95
CCDC30-201ENST00000340612 FOXQ1Q9C009 403 aa2.9□□□□□ -1.95
CCDC30-201ENST00000340612 MKRN2Q9H000 416 aaKnown RBP2.9□□□□□ -1.95
CCDC30-201ENST00000340612 SLC12A7Q9Y666 1083 aa2.9□□□□□ -1.95
CCDC30-201ENST00000340612 TBX1O43435 398 aa2.89□□□□□ -1.95
CCDC30-201ENST00000340612 CBFA2T2O43439 604 aa2.89□□□□□ -1.95
CCDC30-201ENST00000340612 LRRN2O75325 713 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms