RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 IFNL3Q8IZI9 196 aa17.54■□□□□ 0.4
TSPO-201ENST00000329563 NPLOC4Q8TAT6 608 aa17.54■□□□□ 0.4
TSPO-201ENST00000329563 FSD1Q9BTV5 496 aa17.54■□□□□ 0.4
TSPO-201ENST00000329563 KANSL2Q9H9L4 492 aa17.54■□□□□ 0.4
TSPO-201ENST00000329563 FBXO28Q9NVF7 368 aa17.54■□□□□ 0.4
TSPO-201ENST00000329563 FRMPD3Q5JV73 1810 aa17.54■□□□□ 0.4
TSPO-201ENST00000329563 IGKV6D-41A0A0C4DH26 115 aa17.53■□□□□ 0.4
TSPO-201ENST00000329563 SLC15A5A6NIM6 579 aa17.53■□□□□ 0.4
TSPO-201ENST00000329563 PATL2C9JE40 543 aaKnown RBP17.53■□□□□ 0.4
TSPO-201ENST00000329563 PRDM1O75626 825 aa17.53■□□□□ 0.4
TSPO-201ENST00000329563 FLOT1O75955 427 aa17.53■□□□□ 0.4
TSPO-201ENST00000329563 CCND3P30281 292 aaPredicted RBP17.53■□□□□ 0.4
TSPO-201ENST00000329563 ATP2B2Q01814 1243 aa17.53■□□□□ 0.4
TSPO-201ENST00000329563 GRB14Q14449 540 aa17.53■□□□□ 0.4
TSPO-201ENST00000329563 CCDC129Q6ZRS4 1044 aa17.53■□□□□ 0.4
TSPO-201ENST00000329563 C7orf61Q8IZ16 206 aa17.53■□□□□ 0.4
TSPO-201ENST00000329563 SPATC1LQ9H0A9 340 aa17.53■□□□□ 0.4
TSPO-201ENST00000329563 SH2D4AQ9H788 454 aa17.53■□□□□ 0.4
TSPO-201ENST00000329563 HOXC10Q9NYD6 342 aa17.53■□□□□ 0.4
TSPO-201ENST00000329563 WDR46O15213 610 aaKnown RBP17.52■□□□□ 0.4
TSPO-201ENST00000329563 MSCO60682 206 aa17.52■□□□□ 0.4
TSPO-201ENST00000329563 GNAT2P19087 354 aa17.52■□□□□ 0.4
TSPO-201ENST00000329563 TDO2P48775 406 aa17.52■□□□□ 0.4
TSPO-201ENST00000329563 BMP2KLQ5H9B9 411 aa17.52■□□□□ 0.4
TSPO-201ENST00000329563 TTC22Q5TAA0 569 aa17.52■□□□□ 0.4
TSPO-201ENST00000329563 ADAMTS5Q9UNA0 930 aa17.52■□□□□ 0.4
TSPO-201ENST00000329563 TACC3Q9Y6A5 838 aa17.52■□□□□ 0.4
TSPO-201ENST00000329563 LAMA3Q16787 3333 aa17.52■□□□□ 0.39
TSPO-201ENST00000329563 APPP05067 770 aa17.51■□□□□ 0.39
TSPO-201ENST00000329563 HOXC6P09630 235 aa17.51■□□□□ 0.39
TSPO-201ENST00000329563 ERCC3P19447 782 aa17.51■□□□□ 0.39
TSPO-201ENST00000329563 TMEM132BQ14DG7 1078 aa17.51■□□□□ 0.39
TSPO-201ENST00000329563 FAM83BQ5T0W9 1011 aa17.51■□□□□ 0.39
TSPO-201ENST00000329563 LHX8Q68G74 356 aa17.51■□□□□ 0.39
TSPO-201ENST00000329563 NUP88Q99567 741 aaPredicted RBP17.51■□□□□ 0.39
TSPO-201ENST00000329563 BMP8BP34820 402 aa17.5■□□□□ 0.39
TSPO-201ENST00000329563 VPS53Q5VIR6 699 aa17.5■□□□□ 0.39
TSPO-201ENST00000329563 SAMD1Q6SPF0 538 aaPredicted RBP17.5■□□□□ 0.39
TSPO-201ENST00000329563 SKAP1Q86WV1 359 aa17.5■□□□□ 0.39
TSPO-201ENST00000329563 MB21D1Q8N884 522 aa17.5■□□□□ 0.39
TSPO-201ENST00000329563 SHCBP1Q8NEM2 672 aa17.5■□□□□ 0.39
TSPO-201ENST00000329563 REPS2Q8NFH8 660 aa17.5■□□□□ 0.39
TSPO-201ENST00000329563 MKNK2Q9HBH9 465 aa17.5■□□□□ 0.39
TSPO-201ENST00000329563 SLC5A4Q9NY91 659 aa17.5■□□□□ 0.39
TSPO-201ENST00000329563 MYH4Q9Y623 1939 aa17.5■□□□□ 0.39
TSPO-201ENST00000329563 STRNO43815 780 aa17.49■□□□□ 0.39
TSPO-201ENST00000329563 COBLO75128 1261 aa17.49■□□□□ 0.39
TSPO-201ENST00000329563 ADORA2AP29274 412 aa17.49■□□□□ 0.39
TSPO-201ENST00000329563 TICAM2Q86XR7 235 aa17.49■□□□□ 0.39
TSPO-201ENST00000329563 TRPV1Q8NER1 839 aa17.49■□□□□ 0.39
TSPO-201ENST00000329563 INCENPQ9NQS7 918 aa17.49■□□□□ 0.39
TSPO-201ENST00000329563 NYAP2Q9P242 653 aa17.49■□□□□ 0.39
TSPO-201ENST00000329563 VWA5AO00534 786 aa17.48■□□□□ 0.39
TSPO-201ENST00000329563 RAD21O60216 631 aa17.48■□□□□ 0.39
TSPO-201ENST00000329563 NDUFB10O96000 172 aa17.48■□□□□ 0.39
TSPO-201ENST00000329563 CYP2C19P33261 490 aa17.48■□□□□ 0.39
TSPO-201ENST00000329563 PPARAQ07869 468 aa17.48■□□□□ 0.39
TSPO-201ENST00000329563 PLS1Q14651 629 aa17.48■□□□□ 0.39
TSPO-201ENST00000329563 LRRFIP1Q32MZ4 808 aaKnown RBP17.48■□□□□ 0.39
TSPO-201ENST00000329563 EVI5LQ96CN4 794 aa17.48■□□□□ 0.39
TSPO-201ENST00000329563 CEP95Q96GE4 821 aa17.48■□□□□ 0.39
TSPO-201ENST00000329563 FAM227BQ96M60 508 aa17.48■□□□□ 0.39
TSPO-201ENST00000329563 GOPCQ9HD26 462 aa17.48■□□□□ 0.39
TSPO-201ENST00000329563 PPP1R9AQ9ULJ8 1098 aa17.48■□□□□ 0.39
TSPO-201ENST00000329563 PLIN4Q96Q06 1357 aa17.48■□□□□ 0.39
TSPO-201ENST00000329563 PFASO15067 1338 aa17.47■□□□□ 0.39
TSPO-201ENST00000329563 A0A0D9SFI3 127 aa17.47■□□□□ 0.39
TSPO-201ENST00000329563 F5H6K3 240 aa17.47■□□□□ 0.39
TSPO-201ENST00000329563 KLRC3Q07444 240 aa17.47■□□□□ 0.39
TSPO-201ENST00000329563 FAM47AQ5JRC9 791 aa17.47■□□□□ 0.39
TSPO-201ENST00000329563 DPP9Q86TI2 863 aa17.47■□□□□ 0.39
TSPO-201ENST00000329563 NCAPG2Q86XI2 1143 aa17.47■□□□□ 0.39
TSPO-201ENST00000329563 GDF15Q99988 308 aa17.47■□□□□ 0.39
TSPO-201ENST00000329563 NAPBQ9H115 298 aa17.47■□□□□ 0.39
TSPO-201ENST00000329563 MTMR4Q9NYA4 1195 aa17.47■□□□□ 0.39
TSPO-201ENST00000329563 CLIP2Q9UDT6 1046 aa17.47■□□□□ 0.39
TSPO-201ENST00000329563 ZNF214Q9UL59 606 aaPredicted RBP17.47■□□□□ 0.39
TSPO-201ENST00000329563 ZMYND8Q9ULU4 1186 aaPredicted RBP17.47■□□□□ 0.39
TSPO-201ENST00000329563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.47■□□□□ 0.39
TSPO-201ENST00000329563 TRIM6-TRIM34B2RNG4 842 aa17.46■□□□□ 0.39
TSPO-201ENST00000329563 COL6A1P12109 1028 aa17.46■□□□□ 0.39
TSPO-201ENST00000329563 CNGA1P29973 690 aa17.46■□□□□ 0.39
TSPO-201ENST00000329563 CTDSPL2Q05D32 466 aa17.46■□□□□ 0.39
TSPO-201ENST00000329563 GPR153Q6NV75 609 aa17.46■□□□□ 0.39
TSPO-201ENST00000329563 LRRC47Q8N1G4 583 aaKnown RBP17.46■□□□□ 0.39
TSPO-201ENST00000329563 MKL1Q969V6 931 aa17.46■□□□□ 0.39
TSPO-201ENST00000329563 NACAP1Q9BZK3 213 aa17.46■□□□□ 0.39
TSPO-201ENST00000329563 MROH8Q9H579 483 aa17.46■□□□□ 0.39
TSPO-201ENST00000329563 DDX20Q9UHI6 824 aaKnown RBP17.46■□□□□ 0.39
TSPO-201ENST00000329563 CYBAP13498 195 aa17.45■□□□□ 0.38
TSPO-201ENST00000329563 GSPT1P15170 499 aaKnown RBP17.45■□□□□ 0.38
TSPO-201ENST00000329563 OLFML2BQ68BL8 750 aa17.45■□□□□ 0.38
TSPO-201ENST00000329563 RIOX2Q8IUF8 465 aa17.45■□□□□ 0.38
TSPO-201ENST00000329563 ZNF444Q8N0Y2 327 aaPredicted RBP17.45■□□□□ 0.38
TSPO-201ENST00000329563 NEDD1Q8NHV4 660 aa17.45■□□□□ 0.38
TSPO-201ENST00000329563 ZNFX1Q9P2E3 1918 aaKnown RBP17.45■□□□□ 0.38
TSPO-201ENST00000329563 SDSP20132 328 aa17.44■□□□□ 0.38
TSPO-201ENST00000329563 TFAP4Q01664 338 aa17.44■□□□□ 0.38
TSPO-201ENST00000329563 ZNF589Q86UQ0 364 aaPredicted RBP17.44■□□□□ 0.38
TSPO-201ENST00000329563 ABRAQ8N0Z2 381 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms