RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 USP17L5A8MUK1 530 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 RNF113AO15541 343 aaKnown RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 AKR1B10O60218 316 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 SKIP12755 728 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 PPFIA1Q13136 1202 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 PTK2BQ14289 1009 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 TBC1D10BQ4KMP7 808 aaPredicted RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 SV2BQ7L1I2 683 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 PATL1Q86TB9 770 aaKnown RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 OOSP2Q86WS3 158 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 TSR2Q969E8 191 aaKnown RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 DTNBP1Q96EV8 351 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 MMS19Q96T76 1030 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 STMN4Q9H169 189 aaPredicted RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 KANSL2Q9H9L4 492 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 SLC52A2Q9HAB3 445 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 POLR3EQ9NVU0 708 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 ZNF212Q9UDV6 495 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 IL16Q14005 1332 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 ABCC2Q92887 1545 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 EYA2O00167 538 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 TRAF5O00463 557 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 MSCO60682 206 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 HSF2BPO75031 334 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 HOXC9P31274 260 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 MYL7Q01449 175 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 IFRD2Q12894 506 aaPredicted RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 PRPSAP1Q14558 356 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 AOC3Q16853 763 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 PRPF40BQ6NWY9 871 aaKnown RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 PPP1R2P3Q6NXS1 205 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 DCUN1D2Q6PH85 259 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 CATSPER4Q7RTX7 472 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 MIGA1Q8NAN2 632 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 OSBP2Q969R2 916 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 CHMP6Q96FZ7 201 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 NEK1Q96PY6 1258 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 CTAGE1Q96RT6 745 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 WRNIP1Q96S55 665 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 NUP88Q99567 741 aaPredicted RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 NT5C3AQ9H0P0 336 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 RPF1Q9H9Y2 349 aaKnown RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 CWC15Q9P013 229 aaKnown RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 EXOC6BQ9Y2D4 811 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 TMEM2Q9UHN6 1383 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 ZFYVE16Q7Z3T8 1539 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 MEI4A8MW99 385 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 ZSCAN12O43309 604 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 PAX3P23760 479 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 ERCC5P28715 1186 aaPredicted RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 SATB1Q01826 763 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 ITKQ08881 620 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 TBC1D8BQ0IIM8 1120 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 PHKG1Q16816 387 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 CFAP157Q5JU67 520 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 GDAP1Q8TB36 358 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 STAMQ92783 540 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 GBA2Q9HCG7 927 aaPredicted RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 PAG1Q9NWQ8 432 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 CHPF2Q9P2E5 772 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 PI4KBQ9UBF8 816 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 ZNRF3Q9ULT6 936 aa4.47□□□□□ -1.69
RNF38-201ENST00000259605 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.47□□□□□ -1.69
RNF38-201ENST00000259605 POLR3AO14802 1390 aaPredicted RBP4.47□□□□□ -1.69
RNF38-201ENST00000259605 TGFB2P61812 414 aa4.46□□□□□ -1.69
RNF38-201ENST00000259605 TSTA3Q13630 321 aaPredicted RBP4.46□□□□□ -1.69
RNF38-201ENST00000259605 VPS72Q15906 364 aa4.46□□□□□ -1.69
RNF38-201ENST00000259605 XKR9Q5GH70 373 aa4.46□□□□□ -1.69
RNF38-201ENST00000259605 SLFN13Q68D06 897 aa4.46□□□□□ -1.69
RNF38-201ENST00000259605 ANKRD13AQ8IZ07 590 aa4.46□□□□□ -1.69
RNF38-201ENST00000259605 FNBP4Q8N3X1 1017 aaPredicted RBP4.46□□□□□ -1.69
RNF38-201ENST00000259605 OTUD5Q96G74 571 aa4.46□□□□□ -1.69
RNF38-201ENST00000259605 FAM81BQ96LP2 452 aa4.46□□□□□ -1.69
RNF38-201ENST00000259605 MMP19Q99542 508 aa4.46□□□□□ -1.69
RNF38-201ENST00000259605 LARSQ9P2J5 1176 aaKnown RBP4.46□□□□□ -1.69
RNF38-201ENST00000259605 HPCAL4Q9UM19 191 aa4.46□□□□□ -1.69
RNF38-201ENST00000259605 RIPOR2Q9Y4F9 1068 aa4.46□□□□□ -1.69
RNF38-201ENST00000259605 TRIM17Q9Y577 477 aa4.46□□□□□ -1.69
RNF38-201ENST00000259605 TACC3Q9Y6A5 838 aa4.46□□□□□ -1.69
RNF38-201ENST00000259605 LRRC9Q6ZRR7 1453 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 ZNF804BA4D1E1 1349 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 RNF123Q5XPI4 1314 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 KDM3AQ9Y4C1 1321 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 KLF18A0A0U1RQI7 1052 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 USP17L12C9JPN9 530 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 USP17L21D6R901 530 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 IKBKBO14920 756 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 FKTNO75072 461 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 N4BP1O75113 896 aaKnown RBP4.46□□□□□ -1.7
RNF38-201ENST00000259605 SETSIPP0DME0 302 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 TNNI1P19237 187 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 APLP1P51693 650 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 NEDD9Q14511 834 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 USH1GQ495M9 461 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 LGSNQ5TDP6 509 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 CLEC4GQ6UXB4 293 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 MAPKAPK5Q8IW41 473 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 SLFN12Q8IYM2 578 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 ANKRD36BP1Q96IX9 119 aa4.46□□□□□ -1.7
RNF38-201ENST00000259605 ADAMTS8Q9UP79 889 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms