RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 RGPD1P0DJD0 1748 aa17.66■□□□□ 0.42
PXN-201ENST00000228307 N4BP1O75113 896 aaKnown RBP17.66■□□□□ 0.42
PXN-201ENST00000228307 ADD2P35612 726 aa17.66■□□□□ 0.42
PXN-201ENST00000228307 MRPS25P82663 173 aaKnown RBP17.66■□□□□ 0.42
PXN-201ENST00000228307 GRIN1Q05586 938 aa17.66■□□□□ 0.42
PXN-201ENST00000228307 HLTFQ14527 1009 aaKnown RBP eCLIP17.66■□□□□ 0.42
PXN-201ENST00000228307 AKNAD1Q5T1N1 836 aa17.66■□□□□ 0.42
PXN-201ENST00000228307 SLC51AQ86UW1 340 aa17.66■□□□□ 0.42
PXN-201ENST00000228307 SYMPKQ92797 1274 aaKnown RBP17.66■□□□□ 0.42
PXN-201ENST00000228307 SAR1BQ9Y6B6 198 aa17.66■□□□□ 0.42
PXN-201ENST00000228307 AFF2P51816 1311 aa17.66■□□□□ 0.42
PXN-201ENST00000228307 ERVV-1B6SEH8 477 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 SH2B2O14492 632 aaPredicted RBP17.65■□□□□ 0.42
PXN-201ENST00000228307 KCNJ6P48051 423 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 KRT83P78385 493 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 SND1Q7KZF4 910 aaKnown RBP eCLIP17.65■□□□□ 0.425e-9■□□□□ 8.6
PXN-201ENST00000228307 ZSCAN29Q8IWY8 852 aaPredicted RBP17.65■□□□□ 0.42
PXN-201ENST00000228307 NELFBQ8WX92 580 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 MMRN2Q9H8L6 949 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 ADGRG1Q9Y653 693 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 COL15A1P39059 1388 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 USP17L12C9JPN9 530 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 USP17L21D6R901 530 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 PSMA7O14818 248 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 TFRCP02786 760 aaKnown RBP17.65■□□□□ 0.42
PXN-201ENST00000228307 TUBB4BP68371 445 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 TBC1D8BQ0IIM8 1120 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 EPN1Q9Y6I3 576 aaPredicted RBP17.65■□□□□ 0.42
PXN-201ENST00000228307 SMIM22K7EJ46 135 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 RNF40O75150 1001 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 UFL1O94874 794 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 TUBBP07437 444 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 USP8P40818 1118 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 LIG3P49916 1009 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 CDR1P51861 262 aa17.65■□□□□ 0.42
PXN-201ENST00000228307 ANTXR2P58335 489 aa17.64■□□□□ 0.42
PXN-201ENST00000228307 RNASE9P60153 205 aaKnown RBP17.64■□□□□ 0.42
PXN-201ENST00000228307 DIXDC1Q155Q3 683 aa17.64■□□□□ 0.42
PXN-201ENST00000228307 ZNF654Q8IZM8 581 aa17.64■□□□□ 0.42
PXN-201ENST00000228307 EHBP1Q8NDI1 1231 aa17.64■□□□□ 0.42
PXN-201ENST00000228307 IFT81Q8WYA0 676 aa17.64■□□□□ 0.42
PXN-201ENST00000228307 TUBE1Q9UJT0 475 aa17.64■□□□□ 0.42
PXN-201ENST00000228307 ATP2C2O75185 946 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 VSNL1P62760 191 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 TRIM28Q13263 835 aaKnown RBP17.64■□□□□ 0.41
PXN-201ENST00000228307 WHAMMP3Q1A5X7 153 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 ZNF34Q8IZ26 560 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 JAKMIP2Q96AA8 810 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 HPS5Q9UPZ3 1129 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 SPATA31A5Q5VU36 1347 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 SPATA31A7Q8IWB4 1347 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 GOLGA6BA6NDN3 693 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 PRDX5P30044 214 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 GUCY1A2P33402 732 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 EIF6P56537 245 aaKnown RBP17.64■□□□□ 0.41
PXN-201ENST00000228307 TTC38Q5R3I4 469 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 FANCBQ8NB91 859 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 ATRIPQ8WXE1 791 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 GPR108Q9NPR9 543 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 RMND1Q9NWS8 449 aa17.64■□□□□ 0.41
PXN-201ENST00000228307 SRGAP2O75044 1071 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 CSF1RP07333 972 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 MAATS1Q7Z4T9 603 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 CCDC93Q567U6 631 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 TRIML1Q8N9V2 468 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 FAM71BQ8TC56 605 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 OXER1Q8TDS5 423 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 PPM1EQ8WY54 764 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 FUT8Q9BYC5 575 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 KCNJ18B7U540 433 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 HSF2BPO75031 334 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 BMP15O95972 392 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 ERCC5P28715 1186 aaPredicted RBP17.63■□□□□ 0.41
PXN-201ENST00000228307 CCT5P48643 541 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 KCNJ12Q14500 433 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 E2F4Q16254 413 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 RAD9BQ6WBX8 426 aa17.63■□□□□ 0.41
PXN-201ENST00000228307 BAZ2BQ9UIF8 2168 aaKnown RBP17.63■□□□□ 0.41
PXN-201ENST00000228307 MMP1P03956 469 aa17.62■□□□□ 0.41
PXN-201ENST00000228307 ARID5AQ03989 594 aa17.62■□□□□ 0.41
PXN-201ENST00000228307 MORC3Q14149 939 aa17.62■□□□□ 0.41
PXN-201ENST00000228307 FOXP4Q8IVH2 680 aaPredicted RBP17.62■□□□□ 0.41
PXN-201ENST00000228307 OR8K1Q8NGG5 319 aa17.62■□□□□ 0.41
PXN-201ENST00000228307 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.62■□□□□ 0.41
PXN-201ENST00000228307 MKRN1Q9UHC7 482 aaKnown RBP17.62■□□□□ 0.41
PXN-201ENST00000228307 TACC1O75410 805 aa17.62■□□□□ 0.41
PXN-201ENST00000228307 TUBB2AQ13885 445 aa17.62■□□□□ 0.41
PXN-201ENST00000228307 TUBB2BQ9BVA1 445 aa17.62■□□□□ 0.41
PXN-201ENST00000228307 MPHOSPH10O00566 681 aaKnown RBP17.62■□□□□ 0.41
PXN-201ENST00000228307 PTPREP23469 700 aa17.62■□□□□ 0.41
PXN-201ENST00000228307 ASIC1P78348 528 aa17.62■□□□□ 0.41
PXN-201ENST00000228307 PTGDRQ13258 359 aa17.62■□□□□ 0.41
PXN-201ENST00000228307 GSPT2Q8IYD1 628 aaKnown RBP17.62■□□□□ 0.41
PXN-201ENST00000228307 ALS2CR12Q96Q35 445 aa17.62■□□□□ 0.41
PXN-201ENST00000228307 UIMC1Q96RL1 719 aa17.62■□□□□ 0.41
PXN-201ENST00000228307 NDUFAB1O14561 156 aa17.61■□□□□ 0.41
PXN-201ENST00000228307 MFAP3LO75121 409 aa17.61■□□□□ 0.41
PXN-201ENST00000228307 APBA3O96018 575 aa17.61■□□□□ 0.41
PXN-201ENST00000228307 MAPKAPK5Q8IW41 473 aa17.61■□□□□ 0.41
PXN-201ENST00000228307 NYXQ9GZU5 481 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms