RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Lcmt1A0A0U1RNF2 332 aa21.12■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Tex13cD3YU32 604 aa21.12■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 IkbkbO88351 757 aa21.12■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Slc9a1Q61165 820 aa21.12■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Prpf40bQ80W14 870 aa21.12■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Ildr1Q8CBR1 537 aa21.12■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Ltn1Q6A009 1767 aa21.12■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Rexo5D3YW29 759 aa21.12■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Gm5592Q3V0A6 857 aa21.12■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Snd1Q78PY7 910 aaKnown RBP21.12■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Ccdc38Q8CDN8 563 aa21.12■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 NsmfQ99NF2 532 aa21.12■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Phrf1A6H619 1682 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Ppef2O35385 757 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Ptpn12P35831 775 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Esyt2Q3TZZ7 845 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Ctnna3Q65CL1 895 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 DlatQ8BMF4 642 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Gimap5Q8BWF2 308 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Q91WD4 421 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Dbndd1Q9CZ00 160 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Mss51Q9D5Z5 446 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 AmfrQ9R049 643 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Gm3409A0A0G2JE67 319 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Ugt1a8D3Z748 530 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Ugt1a10E9PXN7 530 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Kcnj4P52189 445 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Atp1a2Q6PIE5 1020 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Lrrc15Q80X72 579 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Zdhhc14Q8BQQ1 489 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Tmx1Q8VBT0 278 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 NapgQ9CWZ7 312 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Fam217aQ9D9W6 419 aa21.11■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Herc3A6H6S0 1050 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Cnbd1B1AWM0 430 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Stag2O35638 1231 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Dact1Q8R4A3 778 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Smc1bQ920F6 1248 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Mis18aQ9CZJ6 204 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 EcsitQ9QZH6 435 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Usp53P15975 1069 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Nkx2-5P42582 318 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Il15P48346 162 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Rasa2P58069 847 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Rps8P62242 208 aaKnown RBP21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Atp1b3P97370 278 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Smarcc1P97496 1104 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Cdr2P97817 455 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Scg2Q03517 617 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Igbp1Q61249 340 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Mmtag2Q99LX5 260 aaKnown RBP21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Lonrf3Q9D4H7 753 aa21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Pdcd6ipQ9WU78 869 aaKnown RBP21.1■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Gm4307E9PZY4 289 aa21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Gm4312K9J7E2 289 aa21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Nap1l2P51860 460 aa21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Usp5P56399 858 aaKnown RBP21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Chp1P61022 195 aa21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Tekt3Q6X6Z7 490 aa21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Map3k11Q80XI6 850 aa21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Bsdc1Q80Y55 427 aa21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Ubxn8Q9QZ49 277 aa21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Vps33bP59016 617 aa21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 ItpripQ3TNL8 555 aa21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Myo19Q5SV80 963 aa21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Cd2apQ9JLQ0 637 aa21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Myh8P13542 1937 aa21.09■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Aco1P28271 889 aaKnown RBP21.08■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Aak1Q3UHJ0 959 aa21.08■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Arglu1Q3UL36 271 aaKnown RBP21.08■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Cep112Q5PR68 954 aa21.08■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Dnph1Q80VJ3 173 aa21.08■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Tango6Q8C3S2 1079 aa21.08■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Tmem63cQ8CBX0 802 aa21.08■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Card14Q99KF0 999 aa21.08■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Bcl2l12Q9D3J3 255 aa21.08■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Pcdh11xF6ZNL5 1338 aa21.08■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Sema3fO88632 785 aa21.08■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Kcnb1Q03717 857 aa21.08■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Lrrn2Q6PHP6 730 aa21.08■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Rbm19Q8R3C6 952 aaKnown RBP21.08■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 EvplQ9D952 2035 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Frmpd4A2AFR3 1320 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Krt78E9Q0F0 1068 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Dnm2P39054 870 aaKnown RBP21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Cct6bQ61390 531 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Epn1Q80VP1 575 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Hpcal4Q8BGZ1 191 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 HlfQ8BW74 295 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Ndufv1Q91YT0 464 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Mad2l2Q9D752 211 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Rps6ka4Q9Z2B9 773 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Map3k15A2AQW0 1331 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Abcd1P48410 736 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Tubb4bP68372 445 aaKnown RBP21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Tsr1Q5SWD9 803 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Ccdc122Q8BVN0 290 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Epha10Q8BYG9 1007 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Epb41l3Q9WV92 929 aa21.07■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Heg1E9Q7X6 1337 aa21.06■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms