RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	GTB1	Q04924	702 aa		2.73	□□□□□ -1.97
RUD3	YOR216C	TAF5	P38129	798 aa		2.72	□□□□□ -1.97
RUD3	YOR216C	FPR3	P38911	411 aa	Known RBP	2.72	□□□□□ -1.97
RUD3	YOR216C	HXT9	P40885	567 aa		2.72	□□□□□ -1.97
RUD3	YOR216C	FET5	P43561	622 aa		2.72	□□□□□ -1.97
RUD3	YOR216C	SGF73	P53165	657 aa		2.72	□□□□□ -1.97
RUD3	YOR216C	ARP10	Q04549	284 aa		2.72	□□□□□ -1.97
RUD3	YOR216C	RVB2	Q12464	471 aa	Known RBP	2.72	□□□□□ -1.97
RUD3	YOR216C	LOS1	P33418	1100 aa	Predicted RBP	2.71	□□□□□ -1.97
RUD3	YOR216C	YMR178W	Q03219	274 aa	Known RBP	2.71	□□□□□ -1.97
RUD3	YOR216C	CTL1	Q03220	320 aa	Known RBP	2.71	□□□□□ -1.97
RUD3	YOR216C	PSR2	Q07949	397 aa		2.71	□□□□□ -1.97
RUD3	YOR216C	SLX4	Q12098	748 aa		2.71	□□□□□ -1.97
RUD3	YOR216C	YGR161W-C	Q3E744	92 aa		2.71	□□□□□ -1.97
RUD3	YOR216C	CHO1	P08456	276 aa		2.71	□□□□□ -1.98
RUD3	YOR216C	MRS3	P10566	314 aa		2.71	□□□□□ -1.98
RUD3	YOR216C	URK1	P27515	501 aa		2.71	□□□□□ -1.98
RUD3	YOR216C	MDM31	P38880	579 aa		2.71	□□□□□ -1.98
RUD3	YOR216C	YGL242C	P53066	181 aa		2.71	□□□□□ -1.98
RUD3	YOR216C	NUR1	Q12066	484 aa		2.71	□□□□□ -1.98
RUD3	YOR216C	BAG7	Q12128	409 aa		2.71	□□□□□ -1.98
RUD3	YOR216C	ADE17	P38009	592 aa	Known RBP	2.7	□□□□□ -1.98
RUD3	YOR216C	SWD1	P39706	426 aa		2.7	□□□□□ -1.98
RUD3	YOR216C	BUD16	P39988	312 aa		2.7	□□□□□ -1.98
RUD3	YOR216C	TRE2	Q08693	809 aa		2.7	□□□□□ -1.98
RUD3	YOR216C	EDE1	P34216	1381 aa		2.69	□□□□□ -1.98
RUD3	YOR216C	YSP3	P25036	478 aa		2.69	□□□□□ -1.98
RUD3	YOR216C	SWE1	P32944	819 aa		2.69	□□□□□ -1.98
RUD3	YOR216C	MAK10	Q02197	733 aa		2.69	□□□□□ -1.98
RUD3	YOR216C	PFA5	Q03289	374 aa		2.69	□□□□□ -1.98
RUD3	YOR216C	SEC31	P38968	1273 aa	Known RBP	2.68	□□□□□ -1.98
RUD3	YOR216C	DIM1	P41819	318 aa	Known RBP	2.68	□□□□□ -1.98
RUD3	YOR216C	APJ1	P53940	528 aa		2.68	□□□□□ -1.98
RUD3	YOR216C	YPL108W	Q02872	168 aa	Predicted RBP	2.68	□□□□□ -1.98
RUD3	YOR216C	RFA2	P26754	273 aa	Known RBP	2.67	□□□□□ -1.98
RUD3	YOR216C	HXT1	P32465	570 aa		2.67	□□□□□ -1.98
RUD3	YOR216C	FRD1	P32614	470 aa	Known RBP	2.67	□□□□□ -1.98
RUD3	YOR216C	TOM20	P35180	183 aa		2.67	□□□□□ -1.98
RUD3	YOR216C	SDS22	P36047	338 aa		2.67	□□□□□ -1.98
RUD3	YOR216C	UBP13	P38187	747 aa		2.67	□□□□□ -1.98
RUD3	YOR216C	YJL068C	P40363	299 aa		2.67	□□□□□ -1.98
RUD3	YOR216C	DJP1	P40564	432 aa		2.67	□□□□□ -1.98
RUD3	YOR216C	GDH1	P07262	454 aa	Known RBP	2.66	□□□□□ -1.98
RUD3	YOR216C	KAR1	P11927	433 aa		2.66	□□□□□ -1.98
RUD3	YOR216C	TKL1	P23254	680 aa	Known RBP	2.66	□□□□□ -1.98
RUD3	YOR216C	GID7	P25569	745 aa		2.66	□□□□□ -1.98
RUD3	YOR216C	YBR071W	P38243	211 aa		2.66	□□□□□ -1.98
RUD3	YOR216C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
RUD3	YOR216C	GUF1	P46943	645 aa		2.66	□□□□□ -1.98
RUD3	YOR216C	YDL186W	P48568	277 aa		2.66	□□□□□ -1.98
RUD3	YOR216C	TAM41	P53230	385 aa		2.66	□□□□□ -1.98
RUD3	YOR216C	SSB1	P11484	613 aa	Known RBP	2.65	□□□□□ -1.98
RUD3	YOR216C	SAW1	P39735	261 aa		2.65	□□□□□ -1.98
RUD3	YOR216C	SSB2	P40150	613 aa	Known RBP	2.65	□□□□□ -1.98
RUD3	YOR216C	RPT2	P40327	437 aa	Known RBP	2.65	□□□□□ -1.98
RUD3	YOR216C	RBG2	P53295	368 aa	Known RBP	2.65	□□□□□ -1.98
RUD3	YOR216C	AGA1	P32323	725 aa		2.65	□□□□□ -1.99
RUD3	YOR216C	RFC1	P38630	861 aa	Known RBP	2.65	□□□□□ -1.99
RUD3	YOR216C	PRE5	P40302	234 aa	Known RBP	2.65	□□□□□ -1.99
RUD3	YOR216C	TMA64	Q04600	565 aa	Known RBP	2.65	□□□□□ -1.99
RUD3	YOR216C	YML003W	P0CF16	290 aa		2.64	□□□□□ -1.99
RUD3	YOR216C	ERG1	P32476	496 aa	Known RBP	2.64	□□□□□ -1.99
RUD3	YOR216C	MTC6	P38849	526 aa		2.64	□□□□□ -1.99
RUD3	YOR216C	YJL132W	P47014	750 aa		2.64	□□□□□ -1.99
RUD3	YOR216C	PHM6	Q05637	104 aa		2.64	□□□□□ -1.99
RUD3	YOR216C	HCR1	Q05775	265 aa	Known RBP	2.64	□□□□□ -1.99
RUD3	YOR216C	PET111	P08468	800 aa		2.63	□□□□□ -1.99
RUD3	YOR216C	RPS2	P25443	254 aa	Known RBP	2.63	□□□□□ -1.99
RUD3	YOR216C	ERG7	P38604	731 aa		2.63	□□□□□ -1.99
RUD3	YOR216C	YJL213W	P40896	331 aa		2.63	□□□□□ -1.99
RUD3	YOR216C	YDL218W	Q07629	317 aa		2.63	□□□□□ -1.99
RUD3	YOR216C	BUD21	Q08492	214 aa	Predicted RBP	2.63	□□□□□ -1.99
RUD3	YOR216C	SUL2	Q12325	893 aa		2.63	□□□□□ -1.99
RUD3	YOR216C	RPL15A	P05748	204 aa	Known RBP	2.62	□□□□□ -1.99
RUD3	YOR216C	RPB8	P20436	146 aa		2.62	□□□□□ -1.99
RUD3	YOR216C	MCM3	P24279	971 aa	Known RBP	2.62	□□□□□ -1.99
RUD3	YOR216C	STV1	P37296	890 aa		2.62	□□□□□ -1.99
RUD3	YOR216C	ENP1	P38333	483 aa	Known RBP	2.62	□□□□□ -1.99
RUD3	YOR216C	TPM2	P40414	161 aa		2.62	□□□□□ -1.99
RUD3	YOR216C	YTP1	P53584	459 aa		2.62	□□□□□ -1.99
RUD3	YOR216C	MTG1	Q03151	367 aa	Predicted RBP	2.62	□□□□□ -1.99
RUD3	YOR216C	SRP54	P20424	541 aa	Known RBP	2.61	□□□□□ -1.99
RUD3	YOR216C	CLB2	P24869	491 aa		2.61	□□□□□ -1.99
RUD3	YOR216C	ATS1	P31386	333 aa		2.61	□□□□□ -1.99
RUD3	YOR216C	SAC1	P32368	623 aa	Known RBP	2.61	□□□□□ -1.99
RUD3	YOR216C	MIC60	P36112	540 aa		2.61	□□□□□ -1.99
RUD3	YOR216C	AGP2	P38090	596 aa		2.61	□□□□□ -1.99
RUD3	YOR216C	YER130C	P39959	443 aa		2.61	□□□□□ -1.99
RUD3	YOR216C	CAB2	P40506	365 aa		2.61	□□□□□ -1.99
RUD3	YOR216C	CNM67	P53865	581 aa	Known RBP	2.61	□□□□□ -1.99
RUD3	YOR216C	NUP100	Q02629	959 aa		2.61	□□□□□ -1.99
RUD3	YOR216C	ATG23	Q06671	453 aa		2.61	□□□□□ -1.99
RUD3	YOR216C	YOL057W	Q08225	711 aa		2.61	□□□□□ -1.99
RUD3	YOR216C	GRX7	P38068	203 aa		2.6	□□□□□ -1.99
RUD3	YOR216C	RGI2	P40188	164 aa		2.6	□□□□□ -1.99
RUD3	YOR216C	DCP2	P53550	970 aa	Known RBP	2.6	□□□□□ -1.99
RUD3	YOR216C	COG6	P53959	839 aa		2.6	□□□□□ -1.99
RUD3	YOR216C	ATG21	Q02887	496 aa		2.6	□□□□□ -1.99
RUD3	YOR216C	SWA2	Q06677	668 aa		2.6	□□□□□ -1.99
RUD3	YOR216C	TFC4	P33339	1025 aa		2.59	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 126 ms