RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	NTO1	Q12311	748 aa		4.15	□□□□□ -1.74
YSH1	YLR277C	OCA6	Q12454	224 aa		4.15	□□□□□ -1.74
YSH1	YLR277C	SRF1	Q12516	437 aa		4.15	□□□□□ -1.74
YSH1	YLR277C	SSM4	P40318	1319 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	YSP2	Q06681	1438 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	YAK1	P14680	807 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	CDC42	P19073	191 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	KIP1	P28742	1111 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	ATP7	P30902	174 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	CYM1	P32898	989 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	LOT5	P34234	306 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	MAE1	P36013	669 aa	Known RBP	4.15	□□□□□ -1.75
YSH1	YLR277C	GLG1	P36143	616 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	AKL1	P38080	1108 aa	Known RBP	4.15	□□□□□ -1.75
YSH1	YLR277C	RFT1	P38206	574 aa	Predicted RBP	4.15	□□□□□ -1.75
YSH1	YLR277C	YBR287W	P38355	427 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	NEM1	P38757	446 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	YDR089W	P38966	869 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	LSM5	P40089	93 aa	Known RBP	4.15	□□□□□ -1.75
YSH1	YLR277C	SLM1	P40485	686 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	RNY1	Q02933	434 aa	Known RBP	4.15	□□□□□ -1.75
YSH1	YLR277C	MMT1	Q03218	510 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	RSN1	Q03516	953 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	TDA9	Q04545	1251 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	YLR177W	Q06251	628 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	HFI1	Q12060	488 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	VAM3	Q12241	283 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	MDY2	Q12285	212 aa		4.15	□□□□□ -1.75
YSH1	YLR277C	DNA2	P38859	1522 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	CAT8	P39113	1433 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	GCN4	P03069	281 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	CPA2	P03965	1118 aa	Known RBP	4.14	□□□□□ -1.75
YSH1	YLR277C	CDC36	P06100	191 aa	Predicted RBP	4.14	□□□□□ -1.75
YSH1	YLR277C	FUR1	P18562	216 aa	Known RBP	4.14	□□□□□ -1.75
YSH1	YLR277C	RET1	P22276	1149 aa	Known RBP	4.14	□□□□□ -1.75
YSH1	YLR277C	NTH2	P35172	780 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	YKL133C	P36066	463 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	YKR015C	P36111	568 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	GPT2	P36148	743 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	MRPL10	P36520	322 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	ECM31	P38122	312 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	MAL33	P38157	468 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	KSP1	P38691	1029 aa	Known RBP	4.14	□□□□□ -1.75
YSH1	YLR277C	EGD2	P38879	174 aa	Known RBP	4.14	□□□□□ -1.75
YSH1	YLR277C	SUR2	P38992	349 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	AIM2	P39721	246 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	MSS2	P40990	351 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	YJL181W	P46987	611 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	ACS2	P52910	683 aa	Known RBP	4.14	□□□□□ -1.75
YSH1	YLR277C	BNA7	Q04066	261 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	YLR173W	Q06247	608 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	ATG20	Q07528	640 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	YOL019W	Q08157	551 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	GAS4	Q08271	471 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
YSH1	YLR277C	NCA2	Q12374	616 aa		4.14	□□□□□ -1.75
YSH1	YLR277C	RRP12	Q12754	1228 aa	Known RBP	4.14	□□□□□ -1.75
YSH1	YLR277C	TUB2	P02557	457 aa	Known RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	HXK2	P04807	486 aa	Known RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	YMR085W	P0CF18	432 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	MRP7	P12687	371 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	NSP1	P14907	823 aa	Known RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	SAN1	P22470	610 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	AMD2	P22580	549 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	RRP7	P25368	297 aa	Predicted RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	PET309	P32522	965 aa	Predicted RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	RMA1	P36001	430 aa	Known RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	RCN1	P36054	211 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	PCF11	P39081	626 aa	Predicted RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	BOL3	P39724	118 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	AST2	P39945	430 aa	Known RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	GIM4	P40005	111 aa	Known RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	YER010C	P40011	234 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	ALG8	P40351	577 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	CCT5	P40413	562 aa	Known RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	ATM1	P40416	690 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	EMW1	P42842	904 aa	Known RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	IRC6	P43615	237 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	IDS2	P46958	469 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	MPS3	P47069	682 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	YGR237C	P50089	785 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	MND1	P53102	219 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	NUT1	P53114	1132 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	ADE16	P54113	591 aa	Known RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	PET117	Q02771	107 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	YPL062W	Q02781	134 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	NOG1	Q02892	647 aa	Known RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	YDC1	Q02896	317 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	SNX41	Q04053	625 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	DFG5	Q05031	458 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	VPS38	Q05919	439 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	SPH1	Q06160	661 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	YPR147C	Q06522	304 aa	Known RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	YLR001C	Q07895	862 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	SMC5	Q08204	1093 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	YOR223W	Q12015	292 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	LEU9	Q12166	604 aa	Known RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	RPP1A	P05318	106 aa	Predicted RBP	4.13	□□□□□ -1.75
YSH1	YLR277C	HAP4	P14064	554 aa		4.13	□□□□□ -1.75
YSH1	YLR277C	ERG1	P32476	496 aa	Known RBP	4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms