RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W TRI1Q05024 226 aa3.91□□□□□ -1.78
TSR1YDL060W HUA2Q12134 243 aa3.91□□□□□ -1.78
TSR1YDL060W DRS2P39524 1355 aa3.91□□□□□ -1.78
TSR1YDL060W URA3P03962 267 aa3.9□□□□□ -1.78
TSR1YDL060W IME1P21190 360 aa3.9□□□□□ -1.78
TSR1YDL060W TRX1P22217 103 aaKnown RBP3.9□□□□□ -1.78
TSR1YDL060W HEL1P36113 551 aa3.9□□□□□ -1.78
TSR1YDL060W YHR112CP38716 378 aa3.9□□□□□ -1.78
TSR1YDL060W FMP10P40098 244 aa3.9□□□□□ -1.78
TSR1YDL060W IMA1P53051 589 aa3.9□□□□□ -1.78
TSR1YDL060W DSD1P53095 428 aa3.9□□□□□ -1.78
TSR1YDL060W UBX2Q04228 584 aa3.9□□□□□ -1.78
TSR1YDL060W DIA2Q08496 732 aaPredicted RBP3.9□□□□□ -1.78
TSR1YDL060W AUS1Q08409 1394 aa3.9□□□□□ -1.78
TSR1YDL060W RPA190P10964 1664 aaKnown RBP3.9□□□□□ -1.79
TSR1YDL060W STF1P01098 86 aa3.9□□□□□ -1.79
TSR1YDL060W TPK1P06244 397 aa3.9□□□□□ -1.79
TSR1YDL060W SEC53P07283 254 aaKnown RBP3.9□□□□□ -1.79
TSR1YDL060W SEC14P24280 304 aaKnown RBP3.9□□□□□ -1.79
TSR1YDL060W ARP2P32381 391 aaKnown RBP3.9□□□□□ -1.79
TSR1YDL060W YHR033WP38690 423 aa3.9□□□□□ -1.79
TSR1YDL060W UTP9P38882 575 aaKnown RBP3.9□□□□□ -1.79
TSR1YDL060W BAP3P41815 604 aa3.9□□□□□ -1.79
TSR1YDL060W POL31P46957 487 aa3.9□□□□□ -1.79
TSR1YDL060W SGF73P53165 657 aa3.9□□□□□ -1.79
TSR1YDL060W VPS9P54787 451 aa3.9□□□□□ -1.79
TSR1YDL060W SEC5P89102 971 aa3.9□□□□□ -1.79
TSR1YDL060W APL4Q12028 832 aa3.9□□□□□ -1.79
TSR1YDL060W MRH1Q12117 320 aaPredicted RBP3.9□□□□□ -1.79
TSR1YDL060W YBR126W-AQ8TGU7 68 aa3.9□□□□□ -1.79
TSR1YDL060W YOR111WQ99210 232 aa3.9□□□□□ -1.79
TSR1YDL060W YML133CQ03099 1374 aa3.89□□□□□ -1.79
TSR1YDL060W YLL067CQ07888 1374 aa3.89□□□□□ -1.79
TSR1YDL060W YLL066CQ99208 1374 aa3.89□□□□□ -1.79
TSR1YDL060W SPE2P21182 396 aa3.89□□□□□ -1.79
TSR1YDL060W ARG1P22768 420 aa3.89□□□□□ -1.79
TSR1YDL060W PRP22P24384 1145 aaKnown RBP3.89□□□□□ -1.79
TSR1YDL060W LCB1P25045 558 aaKnown RBP3.89□□□□□ -1.79
TSR1YDL060W ADK2P26364 225 aa3.89□□□□□ -1.79
TSR1YDL060W APN2P38207 520 aa3.89□□□□□ -1.79
TSR1YDL060W AIM20P40451 204 aa3.89□□□□□ -1.79
TSR1YDL060W LCB2P40970 561 aa3.89□□□□□ -1.79
TSR1YDL060W BST1P43571 1029 aa3.89□□□□□ -1.79
TSR1YDL060W MDE1P47095 244 aa3.89□□□□□ -1.79
TSR1YDL060W MTL1P53214 551 aa3.89□□□□□ -1.79
TSR1YDL060W PEF1P53238 335 aa3.89□□□□□ -1.79
TSR1YDL060W YML119WQ03208 357 aa3.89□□□□□ -1.79
TSR1YDL060W NGL3Q03210 505 aa3.89□□□□□ -1.79
TSR1YDL060W GIS1Q03833 894 aa3.89□□□□□ -1.79
TSR1YDL060W ARP9Q05123 467 aa3.89□□□□□ -1.79
TSR1YDL060W HOS1Q12214 470 aa3.89□□□□□ -1.79
TSR1YDL060W YKL033W-AQ86ZR7 236 aa3.89□□□□□ -1.79
TSR1YDL060W PCK1P10963 549 aa3.89□□□□□ -1.79
TSR1YDL060W STE50P25344 346 aa3.89□□□□□ -1.79
TSR1YDL060W DMC1P25453 334 aa3.89□□□□□ -1.79
TSR1YDL060W MRP20P32387 263 aa3.89□□□□□ -1.79
TSR1YDL060W RMA1P36001 430 aaKnown RBP3.89□□□□□ -1.79
TSR1YDL060W YAP3P38749 330 aa3.89□□□□□ -1.79
TSR1YDL060W FSH1P38777 243 aaKnown RBP3.89□□□□□ -1.79
TSR1YDL060W NUP60P39705 539 aa3.89□□□□□ -1.79
TSR1YDL060W RTR1P40084 226 aaPredicted RBP3.89□□□□□ -1.79
TSR1YDL060W SEC28P40509 296 aaKnown RBP3.89□□□□□ -1.79
TSR1YDL060W QRI1P43123 477 aaKnown RBP3.89□□□□□ -1.79
TSR1YDL060W HST1P53685 503 aa3.89□□□□□ -1.79
TSR1YDL060W CIK1Q01649 594 aa3.89□□□□□ -1.79
TSR1YDL060W PEX25Q02969 394 aa3.89□□□□□ -1.79
TSR1YDL060W TLG1Q03322 224 aa3.89□□□□□ -1.79
TSR1YDL060W CRD1Q07560 283 aa3.89□□□□□ -1.79
TSR1YDL060W ENT4Q07872 247 aa3.89□□□□□ -1.79
TSR1YDL060W APL5Q08951 932 aaKnown RBP3.89□□□□□ -1.79
TSR1YDL060W GET3Q12154 354 aaKnown RBP3.89□□□□□ -1.79
TSR1YDL060W YOL159C-AQ3E769 90 aa3.89□□□□□ -1.79
TSR1YDL060W CHC1P22137 1653 aaKnown RBP3.89□□□□□ -1.79
TSR1YDL060W CDC24P11433 854 aaPredicted RBP3.88□□□□□ -1.79
TSR1YDL060W VMA2P16140 517 aaKnown RBP3.88□□□□□ -1.79
TSR1YDL060W YCK1P23291 538 aa3.88□□□□□ -1.79
TSR1YDL060W RRP43P25359 394 aaPredicted RBP3.88□□□□□ -1.79
TSR1YDL060W RRP7P25368 297 aaPredicted RBP3.88□□□□□ -1.79
TSR1YDL060W CWH43P25618 953 aa3.88□□□□□ -1.79
TSR1YDL060W GCS1P35197 352 aa3.88□□□□□ -1.79
TSR1YDL060W SFB3P38810 929 aa3.88□□□□□ -1.79
TSR1YDL060W GDI1P39958 451 aaKnown RBP3.88□□□□□ -1.79
TSR1YDL060W CAB2P40506 365 aa3.88□□□□□ -1.79
TSR1YDL060W BUD8P41698 603 aa3.88□□□□□ -1.79
TSR1YDL060W BUD27P43573 796 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
TSR1YDL060W ARC1P46672 376 aaKnown RBP3.88□□□□□ -1.79
TSR1YDL060W COG1P53079 417 aa3.88□□□□□ -1.79
TSR1YDL060W PXR1P53335 271 aaPredicted RBP3.88□□□□□ -1.79
TSR1YDL060W AIM32Q04689 311 aa3.88□□□□□ -1.79
TSR1YDL060W NDL1Q06568 189 aa3.88□□□□□ -1.79
TSR1YDL060W ICL2Q12031 575 aa3.88□□□□□ -1.79
TSR1YDL060W RAD50P12753 1312 aa3.88□□□□□ -1.79
TSR1YDL060W YLR302CO13544 120 aa3.88□□□□□ -1.79
TSR1YDL060W PEP3P27801 918 aa3.88□□□□□ -1.79
TSR1YDL060W SEC66P33754 206 aa3.88□□□□□ -1.79
TSR1YDL060W PSD1P39006 500 aa3.88□□□□□ -1.79
TSR1YDL060W TAF4P50105 388 aa3.88□□□□□ -1.79
TSR1YDL060W NCS2P53923 493 aaPredicted RBP3.88□□□□□ -1.79
TSR1YDL060W REX3Q12090 404 aa3.88□□□□□ -1.79
TSR1YDL060W PDH1Q12428 516 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms