RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 LBX2Q6XYB7 198 aa13.62□□□□□ -0.23
PTP4A1-207ENST00000639568 CATSPERGQ6ZRH7 1159 aa13.62□□□□□ -0.23
PTP4A1-207ENST00000639568 FOXP4Q8IVH2 680 aaPredicted RBP13.62□□□□□ -0.23
PTP4A1-207ENST00000639568 KHSRPQ92945 711 aaKnown RBP eCLIP13.62□□□□□ -0.231e-6■□□□□ 9.9
PTP4A1-207ENST00000639568 CHD7Q9P2D1 2997 aa13.62□□□□□ -0.23
PTP4A1-207ENST00000639568 MROH7Q68CQ1 1323 aa13.62□□□□□ -0.23
PTP4A1-207ENST00000639568 ZNF521Q96K83 1311 aa13.62□□□□□ -0.23
PTP4A1-207ENST00000639568 FANCIQ9NVI1 1328 aa13.62□□□□□ -0.23
PTP4A1-207ENST00000639568 CCDC27Q2M243 656 aa13.61□□□□□ -0.23
PTP4A1-207ENST00000639568 ATG9AQ7Z3C6 839 aa13.61□□□□□ -0.23
PTP4A1-207ENST00000639568 HLA-CQ95604 372 aa13.61□□□□□ -0.23
PTP4A1-207ENST00000639568 C12orf42Q96LP6 360 aa13.61□□□□□ -0.23
PTP4A1-207ENST00000639568 SIL1Q9H173 461 aa13.61□□□□□ -0.23
PTP4A1-207ENST00000639568 TBX21Q9UL17 535 aa13.61□□□□□ -0.23
PTP4A1-207ENST00000639568 YBX2Q9Y2T7 364 aaKnown RBP13.61□□□□□ -0.23
PTP4A1-207ENST00000639568 CACNA1AO00555 2505 aa13.61□□□□□ -0.23
PTP4A1-207ENST00000639568 REV3LO60673 3130 aa13.61□□□□□ -0.23
PTP4A1-207ENST00000639568 PDS5AQ29RF7 1337 aaKnown RBP13.61□□□□□ -0.23
PTP4A1-207ENST00000639568 COBLO75128 1261 aa13.6□□□□□ -0.23
PTP4A1-207ENST00000639568 FGBP02675 491 aa13.6□□□□□ -0.23
PTP4A1-207ENST00000639568 VCAM1P19320 739 aa13.6□□□□□ -0.23
PTP4A1-207ENST00000639568 ACLYP53396 1101 aa13.6□□□□□ -0.23
PTP4A1-207ENST00000639568 EXOSC9Q06265 439 aaKnown RBP13.6□□□□□ -0.23
PTP4A1-207ENST00000639568 SHROOM1Q2M3G4 852 aaPredicted RBP13.6□□□□□ -0.23
PTP4A1-207ENST00000639568 ATF7IPQ6VMQ6 1270 aa13.6□□□□□ -0.23
PTP4A1-207ENST00000639568 TSEN34Q9BSV6 310 aaKnown RBP13.6□□□□□ -0.23
PTP4A1-207ENST00000639568 MOV10L1Q9BXT6 1211 aaKnown RBP13.6□□□□□ -0.23
PTP4A1-207ENST00000639568 NRBP1Q9UHY1 535 aa13.6□□□□□ -0.23
PTP4A1-207ENST00000639568 TCF20Q9UGU0 1960 aaKnown RBP13.6□□□□□ -0.23
PTP4A1-207ENST00000639568 GH2P01242 217 aa13.59□□□□□ -0.23
PTP4A1-207ENST00000639568 ERCC3P19447 782 aa13.59□□□□□ -0.23
PTP4A1-207ENST00000639568 ADORA1P30542 326 aa13.59□□□□□ -0.23
PTP4A1-207ENST00000639568 VTI1AQ96AJ9 217 aa13.59□□□□□ -0.23
PTP4A1-207ENST00000639568 MAML3Q96JK9 1138 aa13.59□□□□□ -0.23
PTP4A1-207ENST00000639568 PPP1R12CQ9BZL4 782 aa13.59□□□□□ -0.23
PTP4A1-207ENST00000639568 IL23AQ9NPF7 189 aa13.59□□□□□ -0.23
PTP4A1-207ENST00000639568 RAI14Q9P0K7 980 aa13.59□□□□□ -0.23
PTP4A1-207ENST00000639568 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
PTP4A1-207ENST00000639568 MTCH2Q9Y6C9 303 aa13.59□□□□□ -0.23
PTP4A1-207ENST00000639568 MOXD2PA6NHM9 499 aa13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 SPDYE16A6NNV3 312 aaPredicted RBP13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 CIAO1O76071 339 aa13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 BAG3O95817 575 aa13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 HLA-DOAP06340 250 aa13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 RFX5P48382 616 aaPredicted RBP13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 RABGGTBP53611 331 aa13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 SHCBP1Q8NEM2 672 aa13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 SH3RF3Q8TEJ3 882 aaPredicted RBP13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 GLT1D1Q96MS3 346 aa13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 KCNH6Q9H252 994 aa13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 MROH8Q9H579 483 aa13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 RPAP3Q9H6T3 665 aaPredicted RBP13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 HOXC10Q9NYD6 342 aa13.58□□□□□ -0.24
PTP4A1-207ENST00000639568 TLR3O15455 904 aaKnown RBP13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 FCER1AP12319 257 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 ALADP13716 330 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 AKR1A1P14550 325 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 PLS1Q14651 629 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 RAB3GAP1Q15042 981 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 OTOP2Q7RTS6 562 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 METTL16Q86W50 562 aaKnown RBP13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 NCAPG2Q86XI2 1143 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 MAPKAPK5Q8IW41 473 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 ABRAQ8N0Z2 381 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 ZNF384Q8TF68 577 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 NSUN4Q96CB9 384 aaKnown RBP13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 FBXL18Q96ME1 805 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 SPATC1LQ9H0A9 340 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 KIAA1683Q9H0B3 1180 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 DNAJC18Q9H819 358 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 PALD1Q9ULE6 856 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 PCDHA11Q9Y5I1 949 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 SLC4A7Q9Y6M7 1214 aa13.57□□□□□ -0.24
PTP4A1-207ENST00000639568 MYH2Q9UKX2 1941 aa13.56□□□□□ -0.24
PTP4A1-207ENST00000639568 PLCG2P16885 1265 aa13.56□□□□□ -0.24
PTP4A1-207ENST00000639568 POU3F3P20264 500 aaPredicted RBP13.56□□□□□ -0.24
PTP4A1-207ENST00000639568 IL15P40933 162 aaPredicted RBP13.56□□□□□ -0.24
PTP4A1-207ENST00000639568 COG2Q14746 738 aa13.56□□□□□ -0.24
PTP4A1-207ENST00000639568 KCNA10Q16322 511 aa13.56□□□□□ -0.24
PTP4A1-207ENST00000639568 TGFBRAP1Q8WUH2 860 aa13.56□□□□□ -0.24
PTP4A1-207ENST00000639568 CNPY2Q9Y2B0 182 aa13.56□□□□□ -0.24
PTP4A1-207ENST00000639568 ELP1O95163 1332 aa13.56□□□□□ -0.24
PTP4A1-207ENST00000639568 MYH13Q9UKX3 1938 aa13.55□□□□□ -0.24
PTP4A1-207ENST00000639568 RFXAPO00287 272 aa13.55□□□□□ -0.24
PTP4A1-207ENST00000639568 MYOGP15173 224 aa13.55□□□□□ -0.24
PTP4A1-207ENST00000639568 SSTR3P32745 418 aaPredicted RBP13.55□□□□□ -0.24
PTP4A1-207ENST00000639568 TIMM10P62072 90 aa13.55□□□□□ -0.24
PTP4A1-207ENST00000639568 MVPQ14764 893 aaKnown RBP13.55□□□□□ -0.24
PTP4A1-207ENST00000639568 TBC1D9Q6ZT07 1266 aa13.55□□□□□ -0.24
PTP4A1-207ENST00000639568 AATFQ9NY61 560 aaKnown RBP eCLIP13.55□□□□□ -0.24
PTP4A1-207ENST00000639568 LRP2BPQ9P2M1 347 aa13.55□□□□□ -0.24
PTP4A1-207ENST00000639568 TRANK1O15050 2925 aa13.55□□□□□ -0.24
PTP4A1-207ENST00000639568 MYO9BQ13459 2157 aa13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 ZBBXA8MT70 800 aa13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 ADAMTS4O75173 837 aa13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 ATP2A2P16615 1042 aaKnown RBP13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 CYP2C18P33260 490 aa13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 FOXK2Q01167 660 aa13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 TMEM67Q5HYA8 995 aa13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 GJD3Q8N144 294 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms