RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 CWC22Q9HCG8 908 aaKnown RBP7.71□□□□□ -1.17
RTTN-215ENST00000639487 USP17L5A8MUK1 530 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 ADORA1P30542 326 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 MAPK4P31152 587 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 DSG3P32926 999 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 COL19A1Q14993 1142 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 DLGAP5Q15398 846 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 ADGRA1Q86SQ6 560 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 NBPF11Q86T75 865 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 TRPM4Q8TD43 1214 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 AFAP1L1Q8TED9 768 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 USP26Q9BXU7 913 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 TBC1D7Q9P0N9 293 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 USP20Q9Y2K6 914 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 MROH7Q68CQ1 1323 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 SH2B2O14492 632 aaPredicted RBP7.71□□□□□ -1.18
RTTN-215ENST00000639487 TOP1P11387 765 aaKnown RBP7.71□□□□□ -1.18
RTTN-215ENST00000639487 RFC2P35250 354 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 AP3B2Q13367 1082 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 SNAPC2Q13487 334 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 ZNF792Q3KQV3 632 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 MFSD14BQ5SR56 506 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 IFNL1Q8IU54 200 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 IFNL3Q8IZI9 196 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 PANK1Q8TE04 598 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 TNFRSF25Q93038 417 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 VCPKMTQ9H867 229 aa7.71□□□□□ -1.18
RTTN-215ENST00000639487 GBA2Q9HCG7 927 aaPredicted RBP7.71□□□□□ -1.18
RTTN-215ENST00000639487 KMT2EQ8IZD2 1858 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 HSPD1P10809 573 aaKnown RBP7.7□□□□□ -1.18
RTTN-215ENST00000639487 KLRK1P26718 216 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 BTDP43251 543 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 TRAPPC10P48553 1259 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 HSP90AA2PQ14568 343 aaPredicted RBP7.7□□□□□ -1.18
RTTN-215ENST00000639487 FAM109BQ6ICB4 259 aaPredicted RBP7.7□□□□□ -1.18
RTTN-215ENST00000639487 NAA16Q6N069 864 aaPredicted RBP7.7□□□□□ -1.18
RTTN-215ENST00000639487 ZSCAN31Q96LW9 406 aaPredicted RBP7.7□□□□□ -1.18
RTTN-215ENST00000639487 SLC38A10Q9HBR0 1119 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 PAK6Q9NQU5 681 aaPredicted RBP7.7□□□□□ -1.18
RTTN-215ENST00000639487 MTMR4Q9NYA4 1195 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 ZBTB21Q9ULJ3 1066 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 KDM3AQ9Y4C1 1321 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 MSCO60682 206 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 REC8O95072 547 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 BACE1P56817 501 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 NFIL3Q16649 462 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 C8orf34Q49A92 452 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 AKNAD1Q5T1N1 836 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 CCSAPQ6IQ19 270 aaPredicted RBP7.7□□□□□ -1.18
RTTN-215ENST00000639487 KIF2CQ99661 725 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 TIPINQ9BVW5 301 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 NFKBIZQ9BYH8 718 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 DAAM1Q9Y4D1 1078 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 ZNF532Q9HCE3 1301 aa7.7□□□□□ -1.18
RTTN-215ENST00000639487 LAD1O00515 517 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 HLA-DOAP06340 250 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 ZAP70P43403 619 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 CDAN1Q8IWY9 1227 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 DCPSQ96C86 337 aaKnown RBP7.69□□□□□ -1.18
RTTN-215ENST00000639487 ERO1AQ96HE7 468 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 PARK7Q99497 189 aaKnown RBP7.69□□□□□ -1.18
RTTN-215ENST00000639487 RNF26Q9BY78 433 aaPredicted RBP7.69□□□□□ -1.18
RTTN-215ENST00000639487 NACAP1Q9BZK3 213 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 SH2B1Q9NRF2 756 aaPredicted RBP7.69□□□□□ -1.18
RTTN-215ENST00000639487 STK39Q9UEW8 545 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 ATP8B3O60423 1300 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 GREB1Q4ZG55 1949 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 COL4A3Q01955 1670 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 M0R2C6 588 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 LGR5O75473 907 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 IFIT2P09913 472 aaKnown RBP7.69□□□□□ -1.18
RTTN-215ENST00000639487 GPTP24298 496 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 TMEM87AQ8NBN3 555 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 DDX4Q9NQI0 724 aaKnown RBP7.69□□□□□ -1.18
RTTN-215ENST00000639487 PRDM4Q9UKN5 801 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 USP17L15C9J2P7 530 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 USP17L13C9JLJ4 530 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 USP17L11C9JVI0 530 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 USP17L18D6R9N7 530 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 USP17L22D6RA61 530 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 USP17L17D6RBQ6 530 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 USP17L19D6RCP7 530 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 USP17L20D6RJB6 530 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 PRPF3O43395 683 aaKnown RBP7.69□□□□□ -1.18
RTTN-215ENST00000639487 HSPA8P11142 646 aaKnown RBP7.69□□□□□ -1.18
RTTN-215ENST00000639487 NF2P35240 595 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 PRPHP41219 470 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 RGS3P49796 1198 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 USP17L24Q0WX57 530 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 Q4G0T1 1027 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 CT47A1Q5JQC4 288 aaPredicted RBP7.69□□□□□ -1.18
RTTN-215ENST00000639487 RTL10Q7L3V2 364 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 OSBP2Q969R2 916 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 GOPCQ9HD26 462 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 ZNF277Q9NRM2 450 aaPredicted RBP7.69□□□□□ -1.18
RTTN-215ENST00000639487 GJD2Q9UKL4 321 aa7.69□□□□□ -1.18
RTTN-215ENST00000639487 MUC22E2RYF6 1773 aaPredicted RBP7.68□□□□□ -1.18
RTTN-215ENST00000639487 PFKFB2O60825 505 aa7.68□□□□□ -1.18
RTTN-215ENST00000639487 ADRB2P07550 413 aa7.68□□□□□ -1.18
RTTN-215ENST00000639487 GJA5P36382 358 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms