RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 ANGPTL2Q9UKU9 493 aa5.24□□□□□ -1.57
GABRA1-220ENST00000638159 PCDHB12Q9Y5F1 795 aa5.24□□□□□ -1.57
GABRA1-220ENST00000638159 KLRG2A4D1S0 409 aaPredicted RBP5.24□□□□□ -1.57
GABRA1-220ENST00000638159 NOP56O00567 594 aaKnown RBP5.24□□□□□ -1.57
GABRA1-220ENST00000638159 KPNA6O60684 536 aa5.24□□□□□ -1.57
GABRA1-220ENST00000638159 COL9A3Q14050 684 aaPredicted RBP5.24□□□□□ -1.57
GABRA1-220ENST00000638159 ATAT1Q5SQI0 421 aa5.24□□□□□ -1.57
GABRA1-220ENST00000638159 C9orf50Q5SZB4 431 aa5.24□□□□□ -1.57
GABRA1-220ENST00000638159 LRRC69Q6ZNQ3 347 aa5.24□□□□□ -1.57
GABRA1-220ENST00000638159 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.24□□□□□ -1.57
GABRA1-220ENST00000638159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.24□□□□□ -1.57
GABRA1-220ENST00000638159 NEK1Q96PY6 1258 aa5.24□□□□□ -1.57
GABRA1-220ENST00000638159 NSUN3Q9H649 340 aaKnown RBP5.24□□□□□ -1.57
GABRA1-220ENST00000638159 HERC5Q9UII4 1024 aaKnown RBP5.24□□□□□ -1.57
GABRA1-220ENST00000638159 MAP3K2Q9Y2U5 619 aa5.24□□□□□ -1.57
GABRA1-220ENST00000638159 BTAF1O14981 1849 aa5.24□□□□□ -1.57
GABRA1-220ENST00000638159 ABCC12Q96J65 1359 aa5.24□□□□□ -1.57
GABRA1-220ENST00000638159 PGK1P00558 417 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 CA3P07451 260 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 NUBP1P53384 320 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 BTG3Q14201 252 aaPredicted RBP5.23□□□□□ -1.57
GABRA1-220ENST00000638159 NOLC1Q14978 699 aaKnown RBP eCLIP5.23□□□□□ -1.57
GABRA1-220ENST00000638159 Q3C1V9 767 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 DUSP27Q5VZP5 1158 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 CHST3Q7LGC8 479 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 CASZ1Q86V15 1759 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 COL3A1P02461 1466 aaPredicted RBP5.23□□□□□ -1.57
GABRA1-220ENST00000638159 DLG5Q8TDM6 1919 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 KCNQ3O43525 872 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 EGFRP00533 1210 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 TIMP1P01033 207 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 RFC2P35250 354 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 KCNQ1P51787 676 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 CACNB2Q08289 660 aaPredicted RBP5.23□□□□□ -1.57
GABRA1-220ENST00000638159 PDE4DQ08499 809 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 TRAF1Q13077 416 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 MTMR2Q13614 643 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 MTMR3Q13615 1198 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 COG2Q14746 738 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 ZFPM1Q8IX07 1006 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 THNSL1Q8IYQ7 743 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 IL17REQ8NFR9 667 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 CCDC43Q96MW1 224 aaKnown RBP5.23□□□□□ -1.57
GABRA1-220ENST00000638159 SRCIN1Q9C0H9 1055 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 SLC32A1Q9H598 525 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 SP100P23497 879 aaPredicted RBP5.23□□□□□ -1.57
GABRA1-220ENST00000638159 DSG3P32926 999 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 KIAA1841Q6NSI8 718 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 KIAA1211Q6ZU35 1233 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.23□□□□□ -1.57
GABRA1-220ENST00000638159 IFIH1Q9BYX4 1025 aaKnown RBP5.23□□□□□ -1.57
GABRA1-220ENST00000638159 ENTPD7Q9NQZ7 604 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 SEPT3Q9UH03 358 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 KDRP35968 1356 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 COL1A1P02452 1464 aaPredicted RBP5.23□□□□□ -1.57
GABRA1-220ENST00000638159 NRAPQ86VF7 1730 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 SEMA3EO15041 775 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 CSF2RAP15509 400 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 CYP2C18P33260 490 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 CPT1AP50416 773 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 ATP2B3Q16720 1220 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 DAB2IPQ5VWQ8 1189 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 ZNF444Q8N0Y2 327 aaPredicted RBP5.23□□□□□ -1.57
GABRA1-220ENST00000638159 KATNAL1Q9BW62 490 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 CRNKL1Q9BZJ0 848 aaKnown RBP5.23□□□□□ -1.57
GABRA1-220ENST00000638159 KCNQ5Q9NR82 932 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 INSL6Q9Y581 213 aa5.23□□□□□ -1.57
GABRA1-220ENST00000638159 PPFIA3O75145 1194 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 GYG1P46976 350 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 FKBP1AP62942 108 aaKnown RBP5.22□□□□□ -1.57
GABRA1-220ENST00000638159 ABCB5Q2M3G0 1257 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 TDRD5Q8NAT2 981 aaKnown RBP5.22□□□□□ -1.57
GABRA1-220ENST00000638159 CYP2W1Q8TAV3 490 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 DRC1Q96MC2 740 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 FAM193BQ96PV7 902 aaPredicted RBP5.22□□□□□ -1.57
GABRA1-220ENST00000638159 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.22□□□□□ -1.57
GABRA1-220ENST00000638159 TSEN34Q9BSV6 310 aaKnown RBP5.22□□□□□ -1.57
GABRA1-220ENST00000638159 FSD1Q9BTV5 496 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 NRBP1Q9UHY1 535 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 USP17L12C9JPN9 530 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 USP17L21D6R901 530 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 UQCRFS1P1P0C7P4 283 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 TBC1D8BQ0IIM8 1120 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 CERKLQ49MI3 558 aaPredicted RBP5.22□□□□□ -1.57
GABRA1-220ENST00000638159 CMTR1Q8N1G2 835 aaKnown RBP5.22□□□□□ -1.57
GABRA1-220ENST00000638159 MROH5Q6ZUA9 1318 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 COL18A1P39060 1754 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 IDH1O75874 414 aaKnown RBP5.22□□□□□ -1.57
GABRA1-220ENST00000638159 MAP4K4O95819 1239 aaPredicted RBP5.22□□□□□ -1.57
GABRA1-220ENST00000638159 TAF12Q16514 161 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 YAF2Q8IY57 180 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 PHOSPHO2Q8TCD6 241 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 GPR20Q99678 358 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 PAK6Q9NQU5 681 aaPredicted RBP5.22□□□□□ -1.57
GABRA1-220ENST00000638159 BABAM1Q9NWV8 329 aa5.22□□□□□ -1.57
GABRA1-220ENST00000638159 CNOT1A5YKK6 2376 aaKnown RBP5.22□□□□□ -1.57
GABRA1-220ENST00000638159 DDX60Q8IY21 1712 aaKnown RBP5.21□□□□□ -1.57
GABRA1-220ENST00000638159 SYNGAP1Q96PV0 1343 aa5.21□□□□□ -1.57
GABRA1-220ENST00000638159 TESPA1A2RU30 521 aaPredicted RBP5.21□□□□□ -1.57
GABRA1-220ENST00000638159 PLCD1P51178 756 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms