RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 JPH2Q9BR39 696 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 PRM3Q9NNZ6 103 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 BARX2Q9UMQ3 279 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 EID1Q9Y6B2 187 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 ZNF518AQ6AHZ1 1483 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 C9orf84Q5VXU9 1444 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 MED14O60244 1454 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 ADGRL1O94910 1474 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 SPTLC2O15270 562 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 POLR3GO15318 223 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 P4HA2O15460 535 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 SNX2O60749 519 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 ADCY5O95622 1261 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 CENPAP49450 140 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 PTK7Q13308 1070 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 RASA2Q15283 850 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 LRRC49Q8IUZ0 686 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 SLC44A2Q8IWA5 706 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 BRSK2Q8IWQ3 736 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 CEP70Q8NHQ1 597 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 SMARCC2Q8TAQ2 1214 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 TCP11Q8WWU5 503 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 NACC2Q96BF6 587 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 SMAD5Q99717 465 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 BICC1Q9H694 974 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 CENPFP49454 3210 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 YEATS2Q9ULM3 1422 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 ANKRD36BQ8N2N9 1353 aa4.34□□□□□ -1.71
R3HDM1-220ENST00000628915 REV3LO60673 3130 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 ADGRL2O95490 1459 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 ENO4A6NNW6 628 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 FAM25EA8MYX2 175 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 DDHD2O94830 711 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 MCM3P25205 808 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 MXI1P50539 228 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 CETN1Q12798 172 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 SNX1Q13596 522 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 RABL6Q3YEC7 729 aaPredicted RBP4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 THOC7Q6I9Y2 204 aaKnown RBP4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 UNC5DQ6UXZ4 953 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 JAZF1Q86VZ6 243 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 CEP57Q86XR8 500 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 PPHLN1Q8NEY8 458 aaKnown RBP4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 ERMNQ8TAM6 284 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 TATDN2Q93075 761 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 KIF1BPQ96EK5 621 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 ZNF496Q96IT1 587 aaPredicted RBP4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 RNPC3Q96LT9 517 aaKnown RBP4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 THUMPD2Q9BTF0 503 aaKnown RBP4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 CENPHQ9H3R5 247 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 FAM53CQ9NYF3 392 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 VTI1BQ9UEU0 232 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 ADAMTS8Q9UP79 889 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 CEP131Q9UPN4 1083 aa4.34□□□□□ -1.72
R3HDM1-220ENST00000628915 ATP8B1O43520 1251 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 FAM163BP0C2L3 166 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 TNNI2P48788 182 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 WHAMMP3Q1A5X7 153 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 GALNT17Q6IS24 598 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 SLC30A9Q6PML9 568 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 ATF7IPQ6VMQ6 1270 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 RSRC2Q7L4I2 434 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 C11orf74Q86VG3 221 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 TXNDC2Q86VQ3 553 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 CCDC148Q8NFR7 591 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 TEKT4Q8WW24 435 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 EPB41L4AQ9HCS5 686 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 CABP2Q9NPB3 220 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 EMC3Q9P0I2 261 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 WDR37Q9Y2I8 494 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 RALGAPBQ86X10 1494 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 ZFHX3Q15911 3703 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 EIF3FO00303 357 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 BCAR3O75815 825 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 SLC4A1P02730 911 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 CTNNA1P35221 906 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 PSMC4P43686 418 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 LMAN1P49257 510 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 UBXN2AP68543 259 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 CEP78Q5JTW2 689 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 PACS1Q6VY07 963 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 CAPN12Q6ZSI9 719 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 NEK11Q8NG66 645 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 SKA1Q96BD8 255 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 ERO1AQ96HE7 468 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 UQCC2Q9BRT2 126 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 SELENOOQ9BVL4 669 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 DRC3Q9H069 523 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 GDPD2Q9HCC8 539 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 TTF2Q9UNY4 1162 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 MRPS23Q9Y3D9 190 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 C2CD2Q9Y426 696 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 EFCAB6Q5THR3 1501 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 DNMT1P26358 1616 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 TROQ12816 1431 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 OPA1O60313 960 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 TSPAN9O75954 239 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 ATG7O95352 703 aa4.33□□□□□ -1.72
R3HDM1-220ENST00000628915 HSPA8P11142 646 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms