RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 USP17L1Q7RTZ2 530 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 CNNM3Q8NE01 707 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 STK32BQ9NY57 414 aa22.61■■□□□ 1.21
PCDHB11-202ENST00000624887 BMP15O95972 392 aa22.6■■□□□ 1.21
PCDHB11-202ENST00000624887 GTF2IP78347 998 aa22.6■■□□□ 1.21
PCDHB11-202ENST00000624887 GRM4Q14833 912 aa22.6■■□□□ 1.21
PCDHB11-202ENST00000624887 SPECC1Q5M775 1068 aa22.6■■□□□ 1.21
PCDHB11-202ENST00000624887 METTL16Q86W50 562 aaKnown RBP22.6■■□□□ 1.21
PCDHB11-202ENST00000624887 CLIP2Q9UDT6 1046 aa22.6■■□□□ 1.21
PCDHB11-202ENST00000624887 SUGT1Q9Y2Z0 365 aa22.6■■□□□ 1.21
PCDHB11-202ENST00000624887 PARP3Q9Y6F1 533 aa22.6■■□□□ 1.21
PCDHB11-202ENST00000624887 BAZ2BQ9UIF8 2168 aaKnown RBP22.6■■□□□ 1.21
PCDHB11-202ENST00000624887 PTGS1P23219 599 aa22.59■■□□□ 1.21
PCDHB11-202ENST00000624887 BAG6P46379 1132 aa22.59■■□□□ 1.21
PCDHB11-202ENST00000624887 GNAQP50148 359 aa22.59■■□□□ 1.21
PCDHB11-202ENST00000624887 FOCADQ5VW36 1801 aa22.59■■□□□ 1.21
PCDHB11-202ENST00000624887 MYH1P12882 1939 aa22.59■■□□□ 1.21
PCDHB11-202ENST00000624887 ALDH1B1P30837 517 aa22.59■■□□□ 1.21
PCDHB11-202ENST00000624887 CDK8P49336 464 aa22.59■■□□□ 1.21
PCDHB11-202ENST00000624887 PNOCQ13519 176 aa22.59■■□□□ 1.21
PCDHB11-202ENST00000624887 CCDC186Q7Z3E2 898 aa22.59■■□□□ 1.21
PCDHB11-202ENST00000624887 RIMBP2O15034 1052 aa22.58■■□□□ 1.21
PCDHB11-202ENST00000624887 PDE6BP35913 854 aa22.58■■□□□ 1.21
PCDHB11-202ENST00000624887 NOLC1Q14978 699 aaKnown RBP eCLIP22.58■■□□□ 1.21
PCDHB11-202ENST00000624887 MSL1Q68DK7 614 aa22.58■■□□□ 1.21
PCDHB11-202ENST00000624887 MAD2L2Q9UI95 211 aa22.58■■□□□ 1.21
PCDHB11-202ENST00000624887 HOOK1Q9UJC3 728 aaKnown RBP22.58■■□□□ 1.21
PCDHB11-202ENST00000624887 SNED1Q8TER0 1413 aa22.58■■□□□ 1.21
PCDHB11-202ENST00000624887 NLRP5P59047 1200 aa22.58■■□□□ 1.2
PCDHB11-202ENST00000624887 MDM2Q00987 491 aaPredicted RBP22.58■■□□□ 1.2
PCDHB11-202ENST00000624887 STAG2Q8N3U4 1231 aa22.58■■□□□ 1.2
PCDHB11-202ENST00000624887 KIAA1524Q8TCG1 905 aa22.58■■□□□ 1.2
PCDHB11-202ENST00000624887 ZC3H12CQ9C0D7 883 aaKnown RBP22.58■■□□□ 1.2
PCDHB11-202ENST00000624887 SH3GLB2Q9NR46 395 aa22.58■■□□□ 1.2
PCDHB11-202ENST00000624887 SPTLC3Q9NUV7 552 aa22.58■■□□□ 1.2
PCDHB11-202ENST00000624887 NRBP1Q9UHY1 535 aa22.58■■□□□ 1.2
PCDHB11-202ENST00000624887 DAGLAQ9Y4D2 1042 aa22.58■■□□□ 1.2
PCDHB11-202ENST00000624887 VEGFAP15692 232 aaPredicted RBP22.57■■□□□ 1.2
PCDHB11-202ENST00000624887 EYA3Q99504 573 aa22.57■■□□□ 1.2
PCDHB11-202ENST00000624887 TMEM47Q9BQJ4 181 aa22.57■■□□□ 1.2
PCDHB11-202ENST00000624887 CSRNP2Q9H175 543 aa22.57■■□□□ 1.2
PCDHB11-202ENST00000624887 SMTNL1A8MU46 457 aa22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 POLR2DO15514 142 aaKnown RBP22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 FOXP4Q8IVH2 680 aaPredicted RBP22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 NEDD1Q8NHV4 660 aa22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 STX8Q9UNK0 236 aa22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 COL11A2P13942 1736 aaPredicted RBP22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 IKBKBO14920 756 aa22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 CALML3P27482 149 aa22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 TRAPPC10P48553 1259 aa22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 NOM1Q5C9Z4 860 aaKnown RBP22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 TTC38Q5R3I4 469 aa22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 DEFB132Q7Z7B7 95 aa22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 FERMT2Q96AC1 680 aa22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 PYCARDQ9ULZ3 195 aa22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 PCDHA5Q9Y5H7 936 aa22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 QSER1Q2KHR3 1735 aa22.56■■□□□ 1.2
PCDHB11-202ENST00000624887 RRP9O43818 475 aaKnown RBP22.55■■□□□ 1.2
PCDHB11-202ENST00000624887 NCAPHQ15003 741 aa22.55■■□□□ 1.2
PCDHB11-202ENST00000624887 DPP8Q6V1X1 898 aaPredicted RBP22.55■■□□□ 1.2
PCDHB11-202ENST00000624887 MASTLQ96GX5 879 aa22.55■■□□□ 1.2
PCDHB11-202ENST00000624887 PALM3A6NDB9 673 aaPredicted RBP22.54■■□□□ 1.2
PCDHB11-202ENST00000624887 WNT7AO00755 349 aa22.54■■□□□ 1.2
PCDHB11-202ENST00000624887 TERF1P54274 439 aa22.54■■□□□ 1.2
PCDHB11-202ENST00000624887 TPM4P67936 248 aa22.54■■□□□ 1.2
PCDHB11-202ENST00000624887 ISM2Q6H9L7 571 aa22.54■■□□□ 1.2
PCDHB11-202ENST00000624887 OLFM4Q6UX06 510 aa22.54■■□□□ 1.2
PCDHB11-202ENST00000624887 POSTNQ15063 836 aa22.54■■□□□ 1.2
PCDHB11-202ENST00000624887 KANK3Q6NY19 840 aa22.54■■□□□ 1.2
PCDHB11-202ENST00000624887 CERS5Q8N5B7 392 aa22.54■■□□□ 1.2
PCDHB11-202ENST00000624887 LZTS2Q9BRK4 669 aa22.54■■□□□ 1.2
PCDHB11-202ENST00000624887 SERTAD1Q9UHV2 236 aa22.54■■□□□ 1.2
PCDHB11-202ENST00000624887 FOXN1O15353 648 aa22.53■■□□□ 1.2
PCDHB11-202ENST00000624887 ZNF174Q15697 407 aa22.53■■□□□ 1.2
PCDHB11-202ENST00000624887 CCDC144BQ3MJ40 725 aa22.53■■□□□ 1.2
PCDHB11-202ENST00000624887 NT5DC1Q5TFE4 455 aa22.53■■□□□ 1.2
PCDHB11-202ENST00000624887 USP49Q70CQ1 688 aa22.53■■□□□ 1.2
PCDHB11-202ENST00000624887 C17orf53Q8N3J3 647 aaPredicted RBP22.53■■□□□ 1.2
PCDHB11-202ENST00000624887 ACTN4O43707 911 aaKnown RBP22.52■■□□□ 1.2
PCDHB11-202ENST00000624887 ATP2C1P98194 919 aaPredicted RBP22.52■■□□□ 1.2
PCDHB11-202ENST00000624887 SLC35G1Q2M3R5 365 aa22.52■■□□□ 1.2
PCDHB11-202ENST00000624887 GLIPR1L2Q4G1C9 344 aa22.52■■□□□ 1.2
PCDHB11-202ENST00000624887 PIK3AP1Q6ZUJ8 805 aa22.52■■□□□ 1.2
PCDHB11-202ENST00000624887 CYTH3O43739 400 aa22.52■■□□□ 1.2
PCDHB11-202ENST00000624887 NOVP48745 357 aa22.52■■□□□ 1.2
PCDHB11-202ENST00000624887 BLIDQ8IZY5 108 aa22.52■■□□□ 1.2
PCDHB11-202ENST00000624887 TMX4Q9H1E5 349 aaPredicted RBP22.52■■□□□ 1.2
PCDHB11-202ENST00000624887 PCDHA4Q9UN74 947 aa22.52■■□□□ 1.2
PCDHB11-202ENST00000624887 SARSP49591 514 aaKnown RBP22.51■■□□□ 1.19
PCDHB11-202ENST00000624887 FAM177A1Q8N128 213 aaPredicted RBP22.51■■□□□ 1.19
PCDHB11-202ENST00000624887 GPKOWQ92917 476 aaPredicted RBP eCLIP22.51■■□□□ 1.19
PCDHB11-202ENST00000624887 R3HCC1Q9Y3T6 440 aaKnown RBP22.51■■□□□ 1.19
PCDHB11-202ENST00000624887 ADAMTS3O15072 1205 aa22.5■■□□□ 1.19
PCDHB11-202ENST00000624887 LRMPQ12912 555 aa22.5■■□□□ 1.19
PCDHB11-202ENST00000624887 PTGDRQ13258 359 aa22.5■■□□□ 1.19
PCDHB11-202ENST00000624887 DOK7Q18PE1 504 aa22.5■■□□□ 1.19
PCDHB11-202ENST00000624887 PDILTQ8N807 584 aa22.5■■□□□ 1.19
PCDHB11-202ENST00000624887 TTF2Q9UNY4 1162 aaKnown RBP22.5■■□□□ 1.19
PCDHB11-202ENST00000624887 TOP1P11387 765 aaKnown RBP22.5■■□□□ 1.19
PCDHB11-202ENST00000624887 MYL5Q02045 173 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms