RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 GPATCH4Q5T3I0 446 aaKnown RBP12.87□□□□□ -0.35
SNORD3D-201ENST00000619178 NOL8Q76FK4 1167 aaKnown RBP12.87□□□□□ -0.35
SNORD3D-201ENST00000619178 GMCL1P1Q8NEA9 526 aa12.87□□□□□ -0.35
SNORD3D-201ENST00000619178 DCAF4Q8WV16 495 aa12.87□□□□□ -0.35
SNORD3D-201ENST00000619178 SLC10A4Q96EP9 437 aa12.87□□□□□ -0.35
SNORD3D-201ENST00000619178 TMEM47Q9BQJ4 181 aa12.87□□□□□ -0.35
SNORD3D-201ENST00000619178 RBM27Q9P2N5 1060 aaKnown RBP12.87□□□□□ -0.35
SNORD3D-201ENST00000619178 BAZ2BQ9UIF8 2168 aaKnown RBP12.87□□□□□ -0.35
SNORD3D-201ENST00000619178 NID2Q14112 1375 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 NMT2O60551 498 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 PFKFB2O60825 505 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 PARP1P09874 1014 aaKnown RBP12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 PTPRAP18433 802 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 VGLL4Q14135 290 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 RTN1Q16799 776 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 MICU3Q86XE3 530 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 TRIM22Q8IYM9 498 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 FANCBQ8NB91 859 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 ZNF784Q8NCA9 323 aaPredicted RBP12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 ZNF280CQ8ND82 737 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 ZKSCAN4Q969J2 545 aaPredicted RBP12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 TMX3Q96JJ7 454 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 LLPHQ9BRT6 129 aaKnown RBP12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 TMOD4Q9NZQ9 345 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 TMX2Q9Y320 296 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 MYH15Q9Y2K3 1946 aa12.86□□□□□ -0.35
SNORD3D-201ENST00000619178 SPDYE5A6NIY4 337 aa12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 TRAF5O00463 557 aa12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 RAD21O60216 631 aa12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 SMARCA1P28370 1054 aa12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 PDIA3P30101 505 aaKnown RBP12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 HMGN5P82970 282 aaKnown RBP12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 AKAP17AQ02040 695 aaKnown RBP12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 TRAF1Q13077 416 aa12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 LDLRAD1Q5T700 205 aa12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 USP17L2Q6R6M4 530 aa12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 INTS4Q96HW7 963 aaKnown RBP12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 KIAA1683Q9H0B3 1180 aa12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 VCPKMTQ9H867 229 aa12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 TPCN1Q9ULQ1 816 aa12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 ZHX2Q9Y6X8 837 aa12.85□□□□□ -0.35
SNORD3D-201ENST00000619178 F5H6K3 240 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 CXCL11O14625 94 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 WDR46O15213 610 aaKnown RBP12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 GUCY1A2P33402 732 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 SLC1A4P43007 532 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 KLRC3Q07444 240 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 TROAPQ12815 778 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 STK3Q13188 491 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 PABPC4Q13310 644 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 PPIL2Q13356 520 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 GRM4Q14833 912 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 CCDC96Q2M329 555 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 SLFN13Q68D06 897 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 CHURC1Q8WUH1 139 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 WASF1Q92558 559 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 GTF3C6Q969F1 213 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 GMCL1Q96IK5 515 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 SNCAIPQ9Y6H5 919 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 PASKQ96RG2 1323 aa12.84□□□□□ -0.35
SNORD3D-201ENST00000619178 TMEM88BA6NKF7 163 aa12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 UBE2Q2LH0YL09 131 aa12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 ZBTB48P10074 688 aaPredicted RBP12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 FDX1P10109 184 aa12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 BMP3P12645 472 aa12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 BACE1P56817 501 aa12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 HUNKP57058 714 aa12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 SPP2Q13103 211 aa12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 RRP1BQ14684 758 aaKnown RBP12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 ME3Q16798 604 aa12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 FASTKD5Q7L8L6 764 aaKnown RBP12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 FAM160B2Q86V87 743 aa12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 LRRC47Q8N1G4 583 aaKnown RBP12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 HHIPL1Q96JK4 782 aa12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 IPO9Q96P70 1041 aaKnown RBP12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 ELP3Q9H9T3 547 aa12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 PNMA2Q9UL42 364 aa12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 BRPF3Q9ULD4 1205 aa12.83□□□□□ -0.36
SNORD3D-201ENST00000619178 SLURP2P0DP57 97 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 PDHBP11177 359 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 XBP1P17861 261 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 PDCP20941 246 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 GTF2A2P52657 109 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 CCT2P78371 535 aaKnown RBP12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 IKQ13123 557 aaPredicted RBP12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 SNAPC2Q13487 334 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 CUL4AQ13619 759 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 FAM184AQ8NB25 1140 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 PROCA1Q8NCQ7 364 aaPredicted RBP12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 CCDC102AQ96A19 550 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 OPTNQ96CV9 577 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 CWC22Q9HCG8 908 aaKnown RBP12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 SEC63Q9UGP8 760 aaKnown RBP12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 SMC3Q9UQE7 1217 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 MTMR7Q9Y216 660 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms