RNA–Protein interactions for RNA: ENST00000602272.5

FARP1-241, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-241ENST00000602272 MAP4K3Q8IVH8 894 aa8.9□□□□□ -0.98
FARP1-241ENST00000602272 FAM9BQ8IZU0 186 aa8.9□□□□□ -0.98
FARP1-241ENST00000602272 OR13H1Q8NG92 308 aa8.9□□□□□ -0.98
FARP1-241ENST00000602272 THUMPD2Q9BTF0 503 aaKnown RBP8.9□□□□□ -0.98
FARP1-241ENST00000602272 NIF3L1Q9GZT8 377 aa8.9□□□□□ -0.98
FARP1-241ENST00000602272 CASZ1Q86V15 1759 aa8.9□□□□□ -0.98
FARP1-241ENST00000602272 LAMB4A4D0S4 1761 aa8.89□□□□□ -0.99
FARP1-241ENST00000602272 ANKRD33BA6NCL7 494 aa8.89□□□□□ -0.99
FARP1-241ENST00000602272 CYP2E1P05181 493 aaPredicted RBP8.89□□□□□ -0.99
FARP1-241ENST00000602272 HOXD8P13378 290 aaPredicted RBP8.89□□□□□ -0.99
FARP1-241ENST00000602272 ZNF790Q6PG37 636 aa8.89□□□□□ -0.99
FARP1-241ENST00000602272 C1orf127Q8N9H9 656 aa8.89□□□□□ -0.99
FARP1-241ENST00000602272 SNX29Q8TEQ0 813 aa8.89□□□□□ -0.99
FARP1-241ENST00000602272 PLD4Q96BZ4 506 aa8.89□□□□□ -0.99
FARP1-241ENST00000602272 UBR3Q6ZT12 1888 aa8.88□□□□□ -0.99
FARP1-241ENST00000602272 BTBD11A6QL63 1104 aa8.88□□□□□ -0.99
FARP1-241ENST00000602272 DLL1O00548 723 aa8.88□□□□□ -0.99
FARP1-241ENST00000602272 HMGB2P26583 209 aaKnown RBP8.88□□□□□ -0.99
FARP1-241ENST00000602272 NOS3P29474 1203 aa8.88□□□□□ -0.99
FARP1-241ENST00000602272 ORC1Q13415 861 aa8.88□□□□□ -0.99
FARP1-241ENST00000602272 ITPK1Q13572 414 aa8.88□□□□□ -0.99
FARP1-241ENST00000602272 TAF7Q15545 349 aaPredicted RBP8.88□□□□□ -0.99
FARP1-241ENST00000602272 ZNF827Q17R98 1081 aa8.88□□□□□ -0.99
FARP1-241ENST00000602272 HFE2Q6ZVN8 426 aa8.88□□□□□ -0.99
FARP1-241ENST00000602272 TTC5Q8N0Z6 440 aa8.88□□□□□ -0.99
FARP1-241ENST00000602272 MRPL18Q9H0U6 180 aaKnown RBP8.88□□□□□ -0.99
FARP1-241ENST00000602272 MUC3BQ9H195 1237 aa8.88□□□□□ -0.99
FARP1-241ENST00000602272 STK32BQ9NY57 414 aa8.88□□□□□ -0.99
FARP1-241ENST00000602272 HEG1Q9ULI3 1381 aa8.87□□□□□ -0.99
FARP1-241ENST00000602272 KCNQ3O43525 872 aa8.87□□□□□ -0.99
FARP1-241ENST00000602272 PHACTR2O75167 634 aa8.87□□□□□ -0.99
FARP1-241ENST00000602272 R3HDM1Q15032 1099 aaKnown RBP8.87□□□□□ -0.99
FARP1-241ENST00000602272 SLC15A2Q16348 729 aa8.87□□□□□ -0.99
FARP1-241ENST00000602272 TMEM130Q8N3G9 435 aa8.87□□□□□ -0.99
FARP1-241ENST00000602272 LINC00116Q8NCU8 138 aa8.87□□□□□ -0.99
FARP1-241ENST00000602272 ZNF496Q96IT1 587 aaPredicted RBP8.87□□□□□ -0.99
FARP1-241ENST00000602272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.87□□□□□ -0.99
FARP1-241ENST00000602272 DEAF1O75398 565 aaPredicted RBP8.86□□□□□ -0.99
FARP1-241ENST00000602272 FMR1Q06787 632 aaKnown RBP eCLIP8.86□□□□□ -0.99
FARP1-241ENST00000602272 COL13A1Q5TAT6 717 aaPredicted RBP8.86□□□□□ -0.99
FARP1-241ENST00000602272 NPAS4Q8IUM7 802 aa8.86□□□□□ -0.99
FARP1-241ENST00000602272 FMNL2Q96PY5 1086 aa8.86□□□□□ -0.99
FARP1-241ENST00000602272 AKTIPQ9H8T0 292 aa8.86□□□□□ -0.99
FARP1-241ENST00000602272 ZFYVE28Q9HCC9 887 aa8.86□□□□□ -0.99
FARP1-241ENST00000602272 BABAM1Q9NWV8 329 aa8.86□□□□□ -0.99
FARP1-241ENST00000602272 PODXL2Q9NZ53 605 aa8.86□□□□□ -0.99
FARP1-241ENST00000602272 C4AP0C0L4 1744 aa8.85□□□□□ -0.99
FARP1-241ENST00000602272 CNTNAP4Q9C0A0 1308 aa8.85□□□□□ -0.99
FARP1-241ENST00000602272 EREGO14944 169 aa8.85□□□□□ -0.99
FARP1-241ENST00000602272 HYAL3O43820 417 aaPredicted RBP8.85□□□□□ -0.99
FARP1-241ENST00000602272 CES1P23141 567 aa8.85□□□□□ -0.99
FARP1-241ENST00000602272 PLCB3Q01970 1234 aa8.85□□□□□ -0.99
FARP1-241ENST00000602272 CALD1Q05682 793 aaKnown RBP8.85□□□□□ -0.99
FARP1-241ENST00000602272 DNAJC10Q8IXB1 793 aa8.85□□□□□ -0.99
FARP1-241ENST00000602272 IL22RA1Q8N6P7 574 aa8.85□□□□□ -0.99
FARP1-241ENST00000602272 NSUN5Q96P11 429 aaKnown RBP8.85□□□□□ -0.99
FARP1-241ENST00000602272 MIS18AQ9NYP9 233 aa8.85□□□□□ -0.99
FARP1-241ENST00000602272 KANSL3Q9P2N6 904 aa8.85□□□□□ -0.99
FARP1-241ENST00000602272 TSPYL4Q9UJ04 414 aa8.85□□□□□ -0.99
FARP1-241ENST00000602272 RNF112Q9ULX5 631 aa8.85□□□□□ -0.99
FARP1-241ENST00000602272 MYH14Q7Z406 1995 aaKnown RBP8.84□□□□□ -0.99
FARP1-241ENST00000602272 J3QW42 95 aa8.84□□□□□ -0.99
FARP1-241ENST00000602272 CHL1O00533 1208 aa8.84□□□□□ -0.99
FARP1-241ENST00000602272 EIF1AYO14602 144 aaKnown RBP8.84□□□□□ -0.99
FARP1-241ENST00000602272 KIF4AO95239 1232 aa8.84□□□□□ -0.99
FARP1-241ENST00000602272 NEFLP07196 543 aa8.84□□□□□ -0.99
FARP1-241ENST00000602272 EIF4A1P60842 406 aaKnown RBP8.84□□□□□ -0.99
FARP1-241ENST00000602272 COL24A1Q17RW2 1714 aa8.84□□□□□ -0.99
FARP1-241ENST00000602272 USPL1Q5W0Q7 1092 aa8.84□□□□□ -0.99
FARP1-241ENST00000602272 GDF6Q6KF10 455 aaPredicted RBP8.84□□□□□ -0.99
FARP1-241ENST00000602272 PRR23CQ6ZRP0 262 aa8.84□□□□□ -0.99
FARP1-241ENST00000602272 DZIP1LQ8IYY4 767 aaKnown RBP8.84□□□□□ -0.99
FARP1-241ENST00000602272 NGEFQ8N5V2 710 aa8.84□□□□□ -0.99
FARP1-241ENST00000602272 CSRNP1Q96S65 589 aa8.84□□□□□ -0.99
FARP1-241ENST00000602272 IFT57Q9NWB7 429 aa8.84□□□□□ -0.99
FARP1-241ENST00000602272 LRP5O75197 1615 aa8.83□□□□□ -1
FARP1-241ENST00000602272 PNPLA7Q6ZV29 1317 aa8.83□□□□□ -1
FARP1-241ENST00000602272 CPNE3O75131 537 aaKnown RBP8.83□□□□□ -1
FARP1-241ENST00000602272 P4HBP07237 508 aaKnown RBP8.83□□□□□ -1
FARP1-241ENST00000602272 ZNF853P0CG23 659 aa8.83□□□□□ -1
FARP1-241ENST00000602272 CYP19A1P11511 503 aaPredicted RBP8.83□□□□□ -1
FARP1-241ENST00000602272 ERCC3P19447 782 aa8.83□□□□□ -1
FARP1-241ENST00000602272 CRKLP46109 303 aaKnown RBP8.83□□□□□ -1
FARP1-241ENST00000602272 AMIGO3Q86WK7 504 aa8.83□□□□□ -1
FARP1-241ENST00000602272 PMEPA1Q969W9 287 aa8.83□□□□□ -1
FARP1-241ENST00000602272 MEGF10Q96KG7 1140 aa8.83□□□□□ -1
FARP1-241ENST00000602272 TEX13AQ9BXU3 409 aaPredicted RBP8.83□□□□□ -1
FARP1-241ENST00000602272 DNAJC25Q9H1X3 360 aa8.83□□□□□ -1
FARP1-241ENST00000602272 TFCP2L1Q9NZI6 479 aa8.83□□□□□ -1
FARP1-241ENST00000602272 SALL4Q9UJQ4 1053 aa8.83□□□□□ -1
FARP1-241ENST00000602272 LAS1LQ9Y4W2 734 aaKnown RBP8.83□□□□□ -1
FARP1-241ENST00000602272 IL16Q14005 1332 aa8.82□□□□□ -1
FARP1-241ENST00000602272 PRAMEF22A3QJZ6 481 aa8.82□□□□□ -1
FARP1-241ENST00000602272 STARD3NLO95772 234 aa8.82□□□□□ -1
FARP1-241ENST00000602272 SNRPA1P09661 255 aaKnown RBP8.82□□□□□ -1
FARP1-241ENST00000602272 GNAI1P63096 354 aa8.82□□□□□ -1
FARP1-241ENST00000602272 HYAL2Q12891 473 aa8.82□□□□□ -1
FARP1-241ENST00000602272 ENOX2Q16206 610 aaKnown RBP8.82□□□□□ -1
FARP1-241ENST00000602272 INTS5Q6P9B9 1019 aaKnown RBP8.82□□□□□ -1
FARP1-241ENST00000602272 FLAD1Q8NFF5 587 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms