RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 GORABQ5T7V8 394 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 METTL16Q86W50 562 aaKnown RBP9.38□□□□□ -0.91
CCDC47-205ENST00000582331 SPATA5Q8NB90 893 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 TRPV1Q8NER1 839 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 NEUROD6Q96NK8 337 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 RAPGEFL1Q9UHV5 662 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 TRIM43BA6NCK2 446 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 ADCYAP1R1P41586 468 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 TFCP2Q12800 502 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 GRB14Q14449 540 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 GRIN2CQ14957 1233 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 SNX17Q15036 470 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 ANO1Q5XXA6 986 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 SH3RF1Q7Z6J0 888 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 DPP9Q86TI2 863 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 MAPKAPK5Q8IW41 473 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 USP38Q8NB14 1042 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 TGFBRAP1Q8WUH2 860 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 SSH1Q8WYL5 1049 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 TRIM43Q96BQ3 446 aaPredicted RBP9.37□□□□□ -0.91
CCDC47-205ENST00000582331 RNPC3Q96LT9 517 aaKnown RBP9.37□□□□□ -0.91
CCDC47-205ENST00000582331 DNAJC18Q9H819 358 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 PDLIM7Q9NR12 457 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 LRP2BPQ9P2M1 347 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 TACC3Q9Y6A5 838 aa9.37□□□□□ -0.91
CCDC47-205ENST00000582331 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.36□□□□□ -0.91
CCDC47-205ENST00000582331 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.36□□□□□ -0.91
CCDC47-205ENST00000582331 C2orf72A6NCS6 295 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 SEPT4O43236 478 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 PPP1R37O75864 691 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 IGHA2P01877 340 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 CYBAP13498 195 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 PLA2G5P39877 138 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 PPP4CP60510 307 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 TLE2Q04725 743 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 ZYXQ15942 572 aaKnown RBP9.36□□□□□ -0.91
CCDC47-205ENST00000582331 C1orf53Q5VUE5 145 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 PI16Q6UXB8 463 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 ATF7IPQ6VMQ6 1270 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 CATSPERGQ6ZRH7 1159 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 TMC2Q8TDI7 906 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 ATXN2LQ8WWM7 1075 aaKnown RBP9.36□□□□□ -0.91
CCDC47-205ENST00000582331 FERMT2Q96AC1 680 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 FAM122AQ96E09 287 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 C12orf42Q96LP6 360 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 FEZ1Q99689 392 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 AATFQ9NY61 560 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCDC47-205ENST00000582331 BTBD7Q9P203 1132 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 PALD1Q9ULE6 856 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 RLFQ13129 1914 aa9.36□□□□□ -0.91
CCDC47-205ENST00000582331 STRNO43815 780 aa9.35□□□□□ -0.91
CCDC47-205ENST00000582331 GH2P01242 217 aa9.35□□□□□ -0.91
CCDC47-205ENST00000582331 HLA-DOAP06340 250 aa9.35□□□□□ -0.91
CCDC47-205ENST00000582331 DNAJB2P25686 324 aa9.35□□□□□ -0.91
CCDC47-205ENST00000582331 USP14P54578 494 aa9.35□□□□□ -0.91
CCDC47-205ENST00000582331 EPHB4P54760 987 aa9.35□□□□□ -0.91
CCDC47-205ENST00000582331 OLFML2BQ68BL8 750 aa9.35□□□□□ -0.91
CCDC47-205ENST00000582331 NAA16Q6N069 864 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-205ENST00000582331 LBX2Q6XYB7 198 aa9.35□□□□□ -0.91
CCDC47-205ENST00000582331 CDH23Q9H251 3354 aa9.35□□□□□ -0.91
CCDC47-205ENST00000582331 ZNF576Q9H609 170 aa9.35□□□□□ -0.91
CCDC47-205ENST00000582331 SAP30BPQ9UHR5 308 aaKnown RBP9.35□□□□□ -0.91
CCDC47-205ENST00000582331 MUC3AQ02505 3323 aa9.35□□□□□ -0.91
CCDC47-205ENST00000582331 FLT1P17948 1338 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 SIPA1L1O43166 1804 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 KIAA0355O15063 1070 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 CLTBP09497 229 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 UQCRFS1P1P0C7P4 283 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 RAG1P15918 1043 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 ITGB8P26012 769 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 ADORA2AP29274 412 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 ARID4AP29374 1257 aaPredicted RBP9.34□□□□□ -0.91
CCDC47-205ENST00000582331 LRRC41Q15345 812 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 PRAMEF19Q5SWL8 479 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 PPM1EQ8WY54 764 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 ASB2Q96Q27 587 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 KIAA1683Q9H0B3 1180 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 SLC5A4Q9NY91 659 aa9.34□□□□□ -0.91
CCDC47-205ENST00000582331 POTEB3A0JP26 581 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 SPDYE16A6NNV3 312 aaPredicted RBP9.33□□□□□ -0.92
CCDC47-205ENST00000582331 SRGAP3O43295 1099 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 VCAM1P19320 739 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 MCAMP43121 646 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 FPGSQ05932 587 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 MAP3K12Q12852 859 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 RAB3GAP1Q15042 981 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 ALDH1L2Q3SY69 923 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 POTEBQ6S5H4 581 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 ACER1Q8TDN7 264 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 ADAMTS19Q8TE59 1207 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 TIFAQ96CG3 184 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 GAS2L1Q99501 681 aaPredicted RBP9.33□□□□□ -0.92
CCDC47-205ENST00000582331 MOV10L1Q9BXT6 1211 aaKnown RBP9.33□□□□□ -0.92
CCDC47-205ENST00000582331 RPAP3Q9H6T3 665 aaPredicted RBP9.33□□□□□ -0.92
CCDC47-205ENST00000582331 TMEM39AQ9NV64 488 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 HOXC10Q9NYD6 342 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 THEGQ9P2T0 379 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 PHF24Q9UPV7 400 aa9.33□□□□□ -0.92
CCDC47-205ENST00000582331 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.33□□□□□ -0.92
CCDC47-205ENST00000582331 PQBP1O60828 265 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms