RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 USP17L1Q7RTZ2 530 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 ENAHQ8N8S7 591 aaPredicted RBP13.05□□□□□ -0.32
CDH1-210ENST00000566612 SLF1Q9BQI6 1058 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 SRRTQ9BXP5 876 aaKnown RBP13.05□□□□□ -0.32
CDH1-210ENST00000566612 MON2Q7Z3U7 1717 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 FRMPD2Q68DX3 1309 aaPredicted RBP13.05□□□□□ -0.32
CDH1-210ENST00000566612 CTAGE15A4D2H0 777 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 CTAGE8P0CG41 777 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 CYLC1P35663 651 aaPredicted RBP13.05□□□□□ -0.32
CDH1-210ENST00000566612 CTAGE6Q86UF2 777 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 CTAGE4Q8IX94 777 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 ZNF34Q8IZ26 560 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 CCDC42Q96M95 316 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 TUBB4AP04350 444 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 BTDP43251 543 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 LEKR1Q6ZMV7 388 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 DHX40Q8IX18 779 aaKnown RBP13.04□□□□□ -0.32
CDH1-210ENST00000566612 CUL5Q93034 780 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 CRACR2AQ9BSW2 395 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 CPVLQ9H3G5 476 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 EPB41L4AQ9HCS5 686 aaPredicted RBP13.04□□□□□ -0.32
CDH1-210ENST00000566612 IKBKBO14920 756 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 SCNN1DP51172 638 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 PPP2R3AQ06190 1150 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 PPP1R13BQ96KQ4 1090 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 TECP42680 631 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 SV2BQ7L1I2 683 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 LRRC47Q8N1G4 583 aaKnown RBP13.04□□□□□ -0.32
CDH1-210ENST00000566612 GOLGA1Q92805 767 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 LRWD1Q9UFC0 647 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 PPP2R2CQ9Y2T4 447 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 MST1RQ04912 1400 aa13.04□□□□□ -0.32
CDH1-210ENST00000566612 RESP18Q5W5W9 173 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 CABP7Q86V35 215 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 NOC4LQ9BVI4 516 aaKnown RBP13.03□□□□□ -0.32
CDH1-210ENST00000566612 NRXN3Q9Y4C0 1643 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 OVOS2A0A0G2JMS6 1433 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 TMEM232C9JQI7 657 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 DDAH1O94760 285 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 ALX1Q15699 326 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 CCDC122Q5T0U0 273 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 SARM1Q6SZW1 724 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 FAM84BQ96KN1 310 aaPredicted RBP13.03□□□□□ -0.32
CDH1-210ENST00000566612 FUCA2Q9BTY2 467 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 GBP3Q9H0R5 595 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 SRPRBQ9Y5M8 271 aaKnown RBP13.03□□□□□ -0.32
CDH1-210ENST00000566612 FER1L4A9Z1Z3 1794 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 PTPREP23469 700 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 ITPK1Q13572 414 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 SGMS1Q86VZ5 419 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
CDH1-210ENST00000566612 SLC44A5Q8NCS7 719 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 TAF4BQ92750 862 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 OGFRQ9NZT2 677 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 MACROD2A1Z1Q3 448 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 PAFAH1B1P43034 410 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 SPATA1Q5VX52 437 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 IQCEQ6IPM2 695 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 REXO1Q8N1G1 1221 aaKnown RBP13.03□□□□□ -0.32
CDH1-210ENST00000566612 TBC1D7Q9P0N9 293 aa13.03□□□□□ -0.32
CDH1-210ENST00000566612 PHACTR2O75167 634 aa13.02□□□□□ -0.32
CDH1-210ENST00000566612 NOP2P46087 812 aaKnown RBP13.02□□□□□ -0.32
CDH1-210ENST00000566612 SYCP1Q15431 976 aa13.02□□□□□ -0.32
CDH1-210ENST00000566612 CLEC4GQ6UXB4 293 aa13.02□□□□□ -0.32
CDH1-210ENST00000566612 FEZ1Q99689 392 aa13.02□□□□□ -0.32
CDH1-210ENST00000566612 BICDL2A1A5D9 508 aa13.02□□□□□ -0.33
CDH1-210ENST00000566612 SLFN14P0C7P3 912 aa13.02□□□□□ -0.33
CDH1-210ENST00000566612 KIF5AQ12840 1032 aa13.02□□□□□ -0.33
CDH1-210ENST00000566612 TTF2Q9UNY4 1162 aaKnown RBP13.02□□□□□ -0.33
CDH1-210ENST00000566612 COL15A1P39059 1388 aa13.02□□□□□ -0.33
CDH1-210ENST00000566612 TRAF5O00463 557 aa13.02□□□□□ -0.33
CDH1-210ENST00000566612 PRPF3O43395 683 aaKnown RBP13.02□□□□□ -0.33
CDH1-210ENST00000566612 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
CDH1-210ENST00000566612 USP17L2Q6R6M4 530 aa13.02□□□□□ -0.33
CDH1-210ENST00000566612 MORC3Q14149 939 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 USP49Q70CQ1 688 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 KRT25Q7Z3Z0 450 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 TXLNBQ8N3L3 684 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 TRIML1Q8N9V2 468 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 SNX29Q8TEQ0 813 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.01□□□□□ -0.33
CDH1-210ENST00000566612 KRT86O43790 486 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 CAMTA2O94983 1202 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 KIF20AO95235 890 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 MRPL12P52815 198 aaKnown RBP13.01□□□□□ -0.33
CDH1-210ENST00000566612 DPP8Q6V1X1 898 aaPredicted RBP13.01□□□□□ -0.33
CDH1-210ENST00000566612 SPAG5Q96R06 1193 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 DCP1AQ9NPI6 582 aaPredicted RBP13.01□□□□□ -0.33
CDH1-210ENST00000566612 SPTLC3Q9NUV7 552 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 USP40Q9NVE5 1235 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 KCNJ18B7U540 433 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 CASP14P31944 242 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 KCNJ12Q14500 433 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 FCHSD1Q86WN1 690 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 ENGASEQ8NFI3 743 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
CDH1-210ENST00000566612 PIK3C2AO00443 1686 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms