RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 SBNO2Q9Y2G9 1366 aa9.34□□□□□ -0.91
LEMD3-206ENST00000545026 EPHX1P07099 455 aa9.33□□□□□ -0.92
LEMD3-206ENST00000545026 SQSTM1Q13501 440 aa9.33□□□□□ -0.92
LEMD3-206ENST00000545026 BEND4Q6ZU67 534 aa9.33□□□□□ -0.92
LEMD3-206ENST00000545026 CCDC144CPQ8IYA2 1237 aa9.33□□□□□ -0.92
LEMD3-206ENST00000545026 KLHL25Q9H0H3 589 aa9.33□□□□□ -0.92
LEMD3-206ENST00000545026 KCNF1Q9H3M0 494 aa9.33□□□□□ -0.92
LEMD3-206ENST00000545026 LEMD3Q9Y2U8 911 aa9.33□□□□□ -0.92
LEMD3-206ENST00000545026 ESYT3A0FGR9 886 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 ANKRD34BA5PLL1 514 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 DHX15O43143 795 aaKnown RBP9.32□□□□□ -0.92
LEMD3-206ENST00000545026 EOMESO95936 686 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 ETV3P41162 512 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 NFKBIBQ15653 356 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 ANKRD39Q53RE8 183 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 PAOXQ6QHF9 649 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 CLEC10AQ8IUN9 316 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 TOP6BLQ8N6T0 577 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 ZNF513Q8N8E2 541 aaPredicted RBP9.32□□□□□ -0.92
LEMD3-206ENST00000545026 DCAF5Q96JK2 942 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 FBXL18Q96ME1 805 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 DUSP23Q9BVJ7 150 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 SPATA9Q9BWV2 254 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 FANCLQ9NW38 375 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 TMEM260Q9NX78 707 aa9.32□□□□□ -0.92
LEMD3-206ENST00000545026 C1QTNF9BB2RNN3 333 aa9.31□□□□□ -0.92
LEMD3-206ENST00000545026 RBAK-RBAKDNI3L0D1 243 aa9.31□□□□□ -0.92
LEMD3-206ENST00000545026 SHOXO15266 292 aa9.31□□□□□ -0.92
LEMD3-206ENST00000545026 NAT2P11245 290 aa9.31□□□□□ -0.92
LEMD3-206ENST00000545026 RNF4P78317 190 aa9.31□□□□□ -0.92
LEMD3-206ENST00000545026 PLEKHG4Q58EX7 1191 aa9.31□□□□□ -0.92
LEMD3-206ENST00000545026 HEATR6Q6AI08 1181 aaKnown RBP9.31□□□□□ -0.92
LEMD3-206ENST00000545026 RNF141Q8WVD5 230 aa9.31□□□□□ -0.92
LEMD3-206ENST00000545026 APBA2Q99767 749 aa9.31□□□□□ -0.92
LEMD3-206ENST00000545026 FAM83CQ9BQN1 747 aa9.31□□□□□ -0.92
LEMD3-206ENST00000545026 ASPNQ9BXN1 380 aa9.31□□□□□ -0.92
LEMD3-206ENST00000545026 MKRN2Q9H000 416 aaKnown RBP9.31□□□□□ -0.92
LEMD3-206ENST00000545026 CNTNAP4Q9C0A0 1308 aa9.31□□□□□ -0.92
LEMD3-206ENST00000545026 IQCA1LA6NCM1 817 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 FAM181BA6NEQ2 426 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 ADCY3O60266 1144 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 LEFTY1O75610 366 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 FAM153BP0C7A2 387 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 AUHQ13825 339 aaKnown RBP9.3□□□□□ -0.92
LEMD3-206ENST00000545026 SV2CQ496J9 727 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 FAM214BQ7L5A3 538 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 C7orf61Q8IZ16 206 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 APPBP2Q92624 585 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 GATA6Q92908 595 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 SGSM3Q96HU1 749 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 APEX2Q9UBZ4 518 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.3□□□□□ -0.92
LEMD3-206ENST00000545026 ZNF451Q9Y4E5 1061 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 PTCH2Q9Y6C5 1203 aa9.3□□□□□ -0.92
LEMD3-206ENST00000545026 ANKRD62A6NC57 917 aa9.29□□□□□ -0.92
LEMD3-206ENST00000545026 CDC45O75419 566 aa9.29□□□□□ -0.92
LEMD3-206ENST00000545026 CD247P20963 164 aa9.29□□□□□ -0.92
LEMD3-206ENST00000545026 HOMER1Q86YM7 354 aa9.29□□□□□ -0.92
LEMD3-206ENST00000545026 LRRC47Q8N1G4 583 aaKnown RBP9.29□□□□□ -0.92
LEMD3-206ENST00000545026 FGD4Q96M96 766 aa9.29□□□□□ -0.92
LEMD3-206ENST00000545026 RNF225M0QZC1 329 aaPredicted RBP9.28□□□□□ -0.92
LEMD3-206ENST00000545026 NBPF9Q3BBW0 867 aa9.28□□□□□ -0.92
LEMD3-206ENST00000545026 ZBTB38Q8NAP3 1195 aaPredicted RBP9.28□□□□□ -0.92
LEMD3-206ENST00000545026 GIMAP7Q8NHV1 300 aa9.28□□□□□ -0.92
LEMD3-206ENST00000545026 PUS7Q96PZ0 661 aaKnown RBP9.28□□□□□ -0.92
LEMD3-206ENST00000545026 GP6Q9HCN6 339 aa9.28□□□□□ -0.92
LEMD3-206ENST00000545026 TPX2Q9ULW0 747 aaKnown RBP9.28□□□□□ -0.92
LEMD3-206ENST00000545026 A0A1W2PQU0 124 aa9.27□□□□□ -0.93
LEMD3-206ENST00000545026 LRRN2O75325 713 aa9.27□□□□□ -0.93
LEMD3-206ENST00000545026 CLSTN1O94985 981 aa9.27□□□□□ -0.93
LEMD3-206ENST00000545026 FAM87AP0C7U9 286 aa9.27□□□□□ -0.93
LEMD3-206ENST00000545026 ADMP35318 185 aa9.27□□□□□ -0.93
LEMD3-206ENST00000545026 LONRF2Q1L5Z9 754 aa9.27□□□□□ -0.93
LEMD3-206ENST00000545026 GBP3Q9H0R5 595 aa9.27□□□□□ -0.93
LEMD3-206ENST00000545026 C7orf69Q9H7B7 122 aa9.27□□□□□ -0.93
LEMD3-206ENST00000545026 WHRNQ9P202 907 aa9.27□□□□□ -0.93
LEMD3-206ENST00000545026 HMX2A2RU54 273 aa9.26□□□□□ -0.93
LEMD3-206ENST00000545026 AGRPO00253 132 aa9.26□□□□□ -0.93
LEMD3-206ENST00000545026 CYP7A1P22680 504 aa9.26□□□□□ -0.93
LEMD3-206ENST00000545026 OGFOD3Q6PK18 319 aa9.26□□□□□ -0.93
LEMD3-206ENST00000545026 C16orf86Q6ZW13 317 aa9.26□□□□□ -0.93
LEMD3-206ENST00000545026 KIAA0907Q7Z7F0 614 aaPredicted RBP9.26□□□□□ -0.93
LEMD3-206ENST00000545026 ZAR1Q86SH2 424 aa9.26□□□□□ -0.93
LEMD3-206ENST00000545026 ZSWIM2Q8NEG5 633 aa9.26□□□□□ -0.93
LEMD3-206ENST00000545026 ARHGEF4Q9NR80 690 aa9.26□□□□□ -0.93
LEMD3-206ENST00000545026 RAXQ9Y2V3 346 aa9.26□□□□□ -0.93
LEMD3-206ENST00000545026 CAPNS1P04632 268 aa9.25□□□□□ -0.93
LEMD3-206ENST00000545026 ITGAVP06756 1048 aa9.25□□□□□ -0.93
LEMD3-206ENST00000545026 GATA4P43694 442 aa9.25□□□□□ -0.93
LEMD3-206ENST00000545026 ADAT2Q7Z6V5 191 aaKnown RBP9.25□□□□□ -0.93
LEMD3-206ENST00000545026 ZNF227Q86WZ6 799 aa9.25□□□□□ -0.93
LEMD3-206ENST00000545026 SHISA5Q8N114 240 aa9.25□□□□□ -0.93
LEMD3-206ENST00000545026 LRRN4CLQ8ND94 238 aa9.25□□□□□ -0.93
LEMD3-206ENST00000545026 COX4I2Q96KJ9 171 aa9.25□□□□□ -0.93
LEMD3-206ENST00000545026 HEXIM2Q96MH2 286 aaKnown RBP9.25□□□□□ -0.93
LEMD3-206ENST00000545026 LGR4Q9BXB1 951 aa9.25□□□□□ -0.93
LEMD3-206ENST00000545026 PRDM14Q9GZV8 571 aa9.25□□□□□ -0.93
LEMD3-206ENST00000545026 STOML1Q9UBI4 398 aa9.25□□□□□ -0.93
LEMD3-206ENST00000545026 PCDHB12Q9Y5F1 795 aa9.25□□□□□ -0.93
LEMD3-206ENST00000545026 A0A087WZG4 1122 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms