RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 CASP7P55210 303 aa8.31□□□□□ -1.08
LEMD3-205ENST00000544506 TNK2Q07912 1038 aa8.31□□□□□ -1.08
LEMD3-205ENST00000544506 SF3A1Q15459 793 aaKnown RBP8.31□□□□□ -1.08
LEMD3-205ENST00000544506 TNNI3KQ59H18 835 aa8.31□□□□□ -1.08
LEMD3-205ENST00000544506 NBPF12Q5TAG4 269 aaPredicted RBP8.31□□□□□ -1.08
LEMD3-205ENST00000544506 DTWD2Q8NBA8 298 aa8.31□□□□□ -1.08
LEMD3-205ENST00000544506 SREK1Q8WXA9 508 aaKnown RBP8.31□□□□□ -1.08
LEMD3-205ENST00000544506 FBXL18Q96ME1 805 aa8.31□□□□□ -1.08
LEMD3-205ENST00000544506 TNKS2Q9H2K2 1166 aa8.31□□□□□ -1.08
LEMD3-205ENST00000544506 SLC12A7Q9Y666 1083 aa8.31□□□□□ -1.08
LEMD3-205ENST00000544506 KIAA1324LA8MWY0 1029 aaPredicted RBP8.3□□□□□ -1.08
LEMD3-205ENST00000544506 SPINK2P20155 84 aa8.3□□□□□ -1.08
LEMD3-205ENST00000544506 PMS1P54277 932 aaKnown RBP8.3□□□□□ -1.08
LEMD3-205ENST00000544506 TDRD10Q5VZ19 366 aaKnown RBP8.3□□□□□ -1.08
LEMD3-205ENST00000544506 PPFIBP1Q86W92 1011 aa8.3□□□□□ -1.08
LEMD3-205ENST00000544506 DHRS1Q96LJ7 313 aa8.3□□□□□ -1.08
LEMD3-205ENST00000544506 ACTR10Q9NZ32 417 aa8.3□□□□□ -1.08
LEMD3-205ENST00000544506 C9IYK1 514 aa8.29□□□□□ -1.08
LEMD3-205ENST00000544506 CLCN7P51798 805 aa8.29□□□□□ -1.08
LEMD3-205ENST00000544506 CDKAL1Q5VV42 579 aa8.29□□□□□ -1.08
LEMD3-205ENST00000544506 DTX1Q86Y01 620 aa8.29□□□□□ -1.08
LEMD3-205ENST00000544506 PIWIL2Q8TC59 973 aaKnown RBP8.29□□□□□ -1.08
LEMD3-205ENST00000544506 HNRNPLLQ8WVV9 542 aaKnown RBP8.29□□□□□ -1.08
LEMD3-205ENST00000544506 MKRN2Q9H000 416 aaKnown RBP8.29□□□□□ -1.08
LEMD3-205ENST00000544506 BSDC1Q9NW68 430 aaPredicted RBP8.29□□□□□ -1.08
LEMD3-205ENST00000544506 KCNH3Q9ULD8 1083 aa8.29□□□□□ -1.08
LEMD3-205ENST00000544506 ST14Q9Y5Y6 855 aa8.29□□□□□ -1.08
LEMD3-205ENST00000544506 TMEM265A0A087WTH1 108 aa8.28□□□□□ -1.08
LEMD3-205ENST00000544506 STK10O94804 968 aaKnown RBP8.28□□□□□ -1.08
LEMD3-205ENST00000544506 GTF2F1P35269 517 aaKnown RBP eCLIP8.28□□□□□ -1.08
LEMD3-205ENST00000544506 LRP8Q14114 963 aa8.28□□□□□ -1.08
LEMD3-205ENST00000544506 ANKS3Q6ZW76 656 aa8.28□□□□□ -1.08
LEMD3-205ENST00000544506 DHX38Q92620 1227 aaKnown RBP8.28□□□□□ -1.08
LEMD3-205ENST00000544506 PHAXQ9H814 394 aaKnown RBP8.28□□□□□ -1.08
LEMD3-205ENST00000544506 FAM86C1Q9NVL1 165 aa8.28□□□□□ -1.08
LEMD3-205ENST00000544506 ZNF214Q9UL59 606 aaPredicted RBP8.28□□□□□ -1.08
LEMD3-205ENST00000544506 PCDHB10Q9UN67 800 aa8.28□□□□□ -1.08
LEMD3-205ENST00000544506 H3BS24 57 aa8.27□□□□□ -1.09
LEMD3-205ENST00000544506 CCDC144CPQ8IYA2 1237 aa8.27□□□□□ -1.09
LEMD3-205ENST00000544506 HRASLS5Q96KN8 279 aa8.27□□□□□ -1.09
LEMD3-205ENST00000544506 HSPA12BQ96MM6 686 aa8.27□□□□□ -1.09
LEMD3-205ENST00000544506 PCMTD2Q9NV79 361 aa8.27□□□□□ -1.09
LEMD3-205ENST00000544506 SNX11Q9Y5W9 270 aa8.27□□□□□ -1.09
LEMD3-205ENST00000544506 PRNPP04156 253 aa8.26□□□□□ -1.09
LEMD3-205ENST00000544506 TP53P04637 393 aaPredicted RBP8.26□□□□□ -1.09
LEMD3-205ENST00000544506 PRKCQQ04759 706 aa8.26□□□□□ -1.09
LEMD3-205ENST00000544506 SNW1Q13573 536 aaKnown RBP8.26□□□□□ -1.09
LEMD3-205ENST00000544506 NBPF9Q3BBW0 867 aa8.26□□□□□ -1.09
LEMD3-205ENST00000544506 BBS9Q3SYG4 887 aa8.26□□□□□ -1.09
LEMD3-205ENST00000544506 LARP1BQ659C4 914 aaKnown RBP8.26□□□□□ -1.09
LEMD3-205ENST00000544506 KLHL6Q8WZ60 621 aa8.26□□□□□ -1.09
LEMD3-205ENST00000544506 SMARCC1Q92922 1105 aaPredicted RBP8.26□□□□□ -1.09
LEMD3-205ENST00000544506 SEMA3GQ9NS98 782 aa8.26□□□□□ -1.09
LEMD3-205ENST00000544506 PITPNM2Q9BZ72 1349 aa8.26□□□□□ -1.09
LEMD3-205ENST00000544506 SCO2A0A1W2PP80 73 aa8.25□□□□□ -1.09
LEMD3-205ENST00000544506 AOC3Q16853 763 aa8.25□□□□□ -1.09
LEMD3-205ENST00000544506 GNPTABQ3T906 1256 aa8.25□□□□□ -1.09
LEMD3-205ENST00000544506 AXDND1Q5T1B0 1012 aaPredicted RBP8.25□□□□□ -1.09
LEMD3-205ENST00000544506 DCAF15Q66K64 600 aa8.25□□□□□ -1.09
LEMD3-205ENST00000544506 VHLLQ6RSH7 139 aa8.25□□□□□ -1.09
LEMD3-205ENST00000544506 VSIG10LQ86VR7 867 aa8.25□□□□□ -1.09
LEMD3-205ENST00000544506 BCL7CQ8WUZ0 217 aaPredicted RBP8.25□□□□□ -1.09
LEMD3-205ENST00000544506 ARMC5Q96C12 935 aa8.25□□□□□ -1.09
LEMD3-205ENST00000544506 MISP3Q96FF7 219 aa8.25□□□□□ -1.09
LEMD3-205ENST00000544506 GPR62Q9BZJ7 368 aa8.25□□□□□ -1.09
LEMD3-205ENST00000544506 CCDC39Q9UFE4 941 aa8.25□□□□□ -1.09
LEMD3-205ENST00000544506 VAV3Q9UKW4 847 aa8.25□□□□□ -1.09
LEMD3-205ENST00000544506 R3HCC1Q9Y3T6 440 aaKnown RBP8.25□□□□□ -1.09
LEMD3-205ENST00000544506 SHISA3A0PJX4 238 aa8.24□□□□□ -1.09
LEMD3-205ENST00000544506 SHOXO15266 292 aa8.24□□□□□ -1.09
LEMD3-205ENST00000544506 KLF4O43474 513 aa8.24□□□□□ -1.09
LEMD3-205ENST00000544506 HYAL3O43820 417 aaPredicted RBP8.24□□□□□ -1.09
LEMD3-205ENST00000544506 SRFP11831 508 aa8.24□□□□□ -1.09
LEMD3-205ENST00000544506 SLC7A5Q01650 507 aa8.24□□□□□ -1.09
LEMD3-205ENST00000544506 BNIP3Q12983 259 aa8.24□□□□□ -1.09
LEMD3-205ENST00000544506 AUHQ13825 339 aaKnown RBP8.24□□□□□ -1.09
LEMD3-205ENST00000544506 TMC3Q7Z5M5 1100 aa8.24□□□□□ -1.09
LEMD3-205ENST00000544506 WFDC3Q8IUB2 231 aa8.24□□□□□ -1.09
LEMD3-205ENST00000544506 CKAP2LQ8IYA6 745 aa8.24□□□□□ -1.09
LEMD3-205ENST00000544506 PRDM14Q9GZV8 571 aa8.24□□□□□ -1.09
LEMD3-205ENST00000544506 DUSP15Q9H1R2 295 aaPredicted RBP8.24□□□□□ -1.09
LEMD3-205ENST00000544506 PPP1R1BQ9UD71 204 aaPredicted RBP8.24□□□□□ -1.09
LEMD3-205ENST00000544506 WASH4PA8MWX3 477 aa8.23□□□□□ -1.09
LEMD3-205ENST00000544506 B2RBV5 119 aa8.23□□□□□ -1.09
LEMD3-205ENST00000544506 CD96P40200 585 aa8.23□□□□□ -1.09
LEMD3-205ENST00000544506 NMIQ13287 307 aaPredicted RBP8.23□□□□□ -1.09
LEMD3-205ENST00000544506 C6orf15Q6UXA7 325 aaPredicted RBP8.23□□□□□ -1.09
LEMD3-205ENST00000544506 ZNF574Q6ZN55 896 aaPredicted RBP8.23□□□□□ -1.09
LEMD3-205ENST00000544506 NFXL1Q6ZNB6 911 aa8.23□□□□□ -1.09
LEMD3-205ENST00000544506 THAP5Q7Z6K1 395 aa8.23□□□□□ -1.09
LEMD3-205ENST00000544506 C7orf61Q8IZ16 206 aa8.23□□□□□ -1.09
LEMD3-205ENST00000544506 STK11IPQ8N1F8 1099 aa8.23□□□□□ -1.09
LEMD3-205ENST00000544506 CELF2-AS1Q8N7Q2 184 aa8.23□□□□□ -1.09
LEMD3-205ENST00000544506 UBE2FQ969M7 185 aa8.23□□□□□ -1.09
LEMD3-205ENST00000544506 TRIT1Q9H3H1 467 aaKnown RBP8.23□□□□□ -1.09
LEMD3-205ENST00000544506 ZSWIM5Q9P217 1185 aa8.23□□□□□ -1.09
LEMD3-205ENST00000544506 SLC5A6Q9Y289 635 aa8.23□□□□□ -1.09
LEMD3-205ENST00000544506 PCDHB12Q9Y5F1 795 aa8.23□□□□□ -1.09
LEMD3-205ENST00000544506 ADAMTS4O75173 837 aa8.22□□□□□ -1.09
LEMD3-205ENST00000544506 ARTNQ5T4W7 220 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms