RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 CATSPERGQ6ZRH7 1159 aa12.65□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 OTOP2Q7RTS6 562 aa12.65□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ANKRD33Q7Z3H0 272 aa12.65□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 WWC1Q8IX03 1113 aa12.65□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 TMEM199Q8N511 208 aa12.65□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 SH3RF3Q8TEJ3 882 aaPredicted RBP12.65□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 DNAJC18Q9H819 358 aa12.65□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 CEP126Q9P2H0 1117 aa12.65□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 PRR33A8MZF0 331 aa12.64□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 GTPBP6O43824 516 aaPredicted RBP12.64□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 PSRC1Q6PGN9 363 aaPredicted RBP12.64□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 TBC1D9Q6ZT07 1266 aa12.64□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 VTI1AQ96AJ9 217 aa12.64□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 FBXL18Q96ME1 805 aa12.64□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 TOX2Q96NM4 488 aa12.64□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 MOV10L1Q9BXT6 1211 aaKnown RBP12.64□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 TBX21Q9UL17 535 aa12.64□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 MTCH2Q9Y6C9 303 aa12.64□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 CFAP54Q96N23 3096 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 USP34Q70CQ2 3546 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 GH2P01242 217 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 FGBP02675 491 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 TAL1P17542 331 aaPredicted RBP12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 VCAM1P19320 739 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 ERCC3P19447 782 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 RFX5P48382 616 aaPredicted RBP12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 ACLYP53396 1101 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 PLS1Q14651 629 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 CSPP1Q1MSJ5 1256 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 MAPKAPK5Q8IW41 473 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 HLA-CQ95604 372 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 RAI14Q9P0K7 980 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 PALD1Q9ULE6 856 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 COG5Q9UP83 839 aa12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 PRRC2BQ5JSZ5 2229 aaKnown RBP12.63□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 STRNO43815 780 aa12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 LDHCP07864 332 aa12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 CYP2C18P33260 490 aa12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 TIMM10P62072 90 aa12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 RAB3GAP1Q15042 981 aa12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 NCAPG2Q86XI2 1143 aa12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 TGFBRAP1Q8WUH2 860 aa12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 NUP133Q8WUM0 1156 aa12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 CDCA7LQ96GN5 454 aa12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 MAML3Q96JK9 1138 aa12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 RPAP3Q9H6T3 665 aaPredicted RBP12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 SLC5A4Q9NY91 659 aa12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 SAP30BPQ9UHR5 308 aaKnown RBP12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 SALL2Q9Y467 1007 aaPredicted RBP12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 LRRC37A2A6NM11 1700 aa12.62□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 GSTO1P78417 241 aa12.61□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 KCNA10Q16322 511 aa12.61□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 CCDC27Q2M243 656 aa12.61□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 PI16Q6UXB8 463 aa12.61□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 NSUN4Q96CB9 384 aaKnown RBP12.61□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 MTIF3Q9H2K0 278 aaKnown RBP12.61□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 DHX36Q9H2U1 1008 aaKnown RBP12.61□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 IL23AQ9NPF7 189 aa12.61□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 AATFQ9NY61 560 aaKnown RBP eCLIP12.61□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 ZBBXA8MT70 800 aa12.6□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 SSTR3P32745 418 aaPredicted RBP12.6□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 FOXP4Q8IVH2 680 aaPredicted RBP12.6□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 ANKS1AQ92625 1134 aa12.6□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 C12orf42Q96LP6 360 aa12.6□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 PHOX2BQ99453 314 aa12.6□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 NOL10Q9BSC4 688 aaKnown RBP12.6□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 SPATC1LQ9H0A9 340 aa12.6□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 SMCHD1A6NHR9 2005 aa12.6□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 EPOPA6NHQ4 379 aa12.59□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 ADAMTS4O75173 837 aa12.59□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 PGK2P07205 417 aa12.59□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 USP14P54578 494 aa12.59□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 CCL23P55773 120 aa12.59□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 DDX10Q13206 875 aaKnown RBP12.59□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 LBX2Q6XYB7 198 aa12.59□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 GJD3Q8N144 294 aa12.59□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 ARNTL2Q8WYA1 636 aa12.59□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 SLC4A7Q9Y6M7 1214 aa12.59□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 GBF1Q92538 1859 aa12.59□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 UMODL1Q5DID0 1318 aa12.59□□□□□ -0.39
NEDD8-MDP1-202ENST00000534348 CACNA1FO60840 1977 aa12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 MYADML2A6NDP7 307 aa12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 MAP4K4O95819 1239 aaPredicted RBP12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 CA3P07451 260 aa12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 AKR1A1P14550 325 aa12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 GLT1D1Q96MS3 346 aa12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 TSEN34Q9BSV6 310 aaKnown RBP12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 TANGO6Q9C0B7 1094 aa12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 USP44Q9H0E7 712 aa12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 GINM1Q9NU53 330 aa12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 PA2G4Q9UQ80 394 aaKnown RBP12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 PCDHA11Q9Y5I1 949 aa12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 FLT1P17948 1338 aa12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 IL16Q14005 1332 aa12.58□□□□□ -0.4
NEDD8-MDP1-202ENST00000534348 SYNRGQ9UMZ2 1314 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms