RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 SLC4A8Q2Y0W8 1093 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 METTL16Q86W50 562 aaKnown RBP5.86□□□□□ -1.47
CLDND1-208ENST00000503004 NOSTRINQ8IVI9 506 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 ANKRD13AQ8IZ07 590 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 PDILTQ8N807 584 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 ZNF384Q8TF68 577 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 STAG1Q8WVM7 1258 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 CELF1Q92879 486 aaKnown RBP5.86□□□□□ -1.47
CLDND1-208ENST00000503004 TATDN2Q93075 761 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 CCDC34Q96HJ3 373 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 UBXN6Q9BZV1 441 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 KRT23Q9C075 422 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 CNNM2Q9H8M5 875 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 GOPCQ9HD26 462 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 HPSEQ9Y251 543 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 PCDHB6Q9Y5E3 794 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 LRP5O75197 1615 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 COL16A1Q07092 1604 aaPredicted RBP5.86□□□□□ -1.47
CLDND1-208ENST00000503004 TNKSO95271 1327 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 PNPLA7Q6ZV29 1317 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 ERICH2A1L162 156 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 FAM205CA6NFA0 338 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 CAND2O75155 1236 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 PPP6R2O75170 966 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 FMNL1O95466 1100 aaPredicted RBP5.86□□□□□ -1.47
CLDND1-208ENST00000503004 MMP1P03956 469 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 NLRP12P59046 1061 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 PTPN14Q15678 1187 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 CCDC96Q2M329 555 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 TMC6Q7Z403 805 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 SLC51AQ86UW1 340 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 ZNF654Q8IZM8 581 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 FANCBQ8NB91 859 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 SHISA4Q96DD7 197 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 UBAC1Q9BSL1 405 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 HSD3B7Q9H2F3 369 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 EPC1Q9H2F5 836 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 KCNH3Q9ULD8 1083 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 COL14A1Q05707 1796 aaKnown RBP5.86□□□□□ -1.47
CLDND1-208ENST00000503004 ROBO1Q9Y6N7 1651 aa5.86□□□□□ -1.47
CLDND1-208ENST00000503004 COL1A1P02452 1464 aaPredicted RBP5.86□□□□□ -1.47
CLDND1-208ENST00000503004 COQ9O75208 318 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 ZRANB2O95218 330 aaKnown RBP eCLIP5.85□□□□□ -1.47
CLDND1-208ENST00000503004 GNAT2P19087 354 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 BMP6P22004 513 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 TPM4P67936 248 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 MTA1Q13330 715 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 ZNF827Q17R98 1081 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 FAM98CQ17RN3 349 aaKnown RBP5.85□□□□□ -1.47
CLDND1-208ENST00000503004 FAM182BQ5T319 152 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 USP49Q70CQ1 688 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 ANKRD18AQ8IVF6 992 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 TRIM22Q8IYM9 498 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 GRAMD1CQ8IYS0 662 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 CRACR2BQ8N4Y2 399 aaPredicted RBP5.85□□□□□ -1.47
CLDND1-208ENST00000503004 LINC00116Q8NCU8 138 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 CNNM3Q8NE01 707 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 DPF2Q92785 391 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 MIEF2Q96C03 454 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 ERO1AQ96HE7 468 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 CDC5LQ99459 802 aaKnown RBP5.85□□□□□ -1.47
CLDND1-208ENST00000503004 SRRTQ9BXP5 876 aaKnown RBP5.85□□□□□ -1.47
CLDND1-208ENST00000503004 CABP5Q9NP86 173 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 VPS54Q9P1Q0 977 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 PCDHA5Q9Y5H7 936 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 MAGEB6P1A0A0J9YX57 407 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 POLR2DO15514 142 aaKnown RBP5.85□□□□□ -1.47
CLDND1-208ENST00000503004 NMT2O60551 498 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 FAM163BP0C2L3 166 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 CALRP27797 417 aaKnown RBP5.85□□□□□ -1.47
CLDND1-208ENST00000503004 LMAN1P49257 510 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 CORO7P57737 925 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 ARHGAP29Q52LW3 1261 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 EARS2Q5JPH6 523 aaKnown RBP5.85□□□□□ -1.47
CLDND1-208ENST00000503004 RESP18Q5W5W9 173 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 ARMCX5Q6P1M9 558 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 ANKRD23Q86SG2 305 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 ENAHQ8N8S7 591 aaPredicted RBP5.85□□□□□ -1.47
CLDND1-208ENST00000503004 PPM1EQ8WY54 764 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 POM121Q96HA1 1249 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 FAM84BQ96KN1 310 aaPredicted RBP5.85□□□□□ -1.47
CLDND1-208ENST00000503004 FAM210AQ96ND0 272 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 RIOK1Q9BRS2 568 aaKnown RBP5.85□□□□□ -1.47
CLDND1-208ENST00000503004 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.85□□□□□ -1.47
CLDND1-208ENST00000503004 IRAK4Q9NWZ3 460 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 TFCP2L1Q9NZI6 479 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 TUBE1Q9UJT0 475 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 MINPP1Q9UNW1 487 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 BCL9LQ86UU0 1499 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 ZNF804BA4D1E1 1349 aa5.85□□□□□ -1.47
CLDND1-208ENST00000503004 PLEKHA8P1O95397 391 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 PAX7P23759 505 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 OAS2P29728 719 aaKnown RBP5.84□□□□□ -1.47
CLDND1-208ENST00000503004 ACTN2P35609 894 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 PIP4K2BP78356 416 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 FANCCQ00597 558 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 PDE4BQ07343 736 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 GOLGA8FQ08AF8 430 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 GOLGA8DPQ0D2H9 430 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 SAFBQ15424 915 aaKnown RBP eCLIP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms