RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 USP17L5A8MUK1 530 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 PRKAB2O43741 272 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 GDF9O60383 454 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 PCP11498 1178 aaKnown RBP9.03□□□□□ -0.96
CDC42-205ENST00000498236 MCM5P33992 734 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 NT5C2P49902 561 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 NUCB2P80303 420 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 COL9A3Q14050 684 aaPredicted RBP9.03□□□□□ -0.96
CDC42-205ENST00000498236 MFSD14BQ5SR56 506 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 SOGA3Q5TF21 947 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 OLFM4Q6UX06 510 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 RTKN2Q8IZC4 609 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 NCOA7Q8NI08 942 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 FAM174AQ8TBP5 190 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 STAG1Q8WVM7 1258 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 CHMP4CQ96CF2 233 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 PSMD1Q99460 953 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 MTA3Q9BTC8 594 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 MRIQ9BWK5 157 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 CRNKL1Q9BZJ0 848 aaKnown RBP9.03□□□□□ -0.96
CDC42-205ENST00000498236 VPS33BQ9H267 617 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 CNNM2Q9H8M5 875 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 VRTNQ9H8Y1 702 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 ATP8A2Q9NTI2 1148 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.03□□□□□ -0.96
CDC42-205ENST00000498236 MROH7-TTC4A0A0A0MT08 1334 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 GAKO14976 1311 aa9.03□□□□□ -0.96
CDC42-205ENST00000498236 GPR75-ASB3A0A0A6YYF3 556 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 USP17L3A6NCW0 530 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 USP17L4A6NCW7 530 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 POTECB2RU33 542 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 ATG7O95352 703 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 BAG3O95817 575 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 FGRP09769 529 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 DPEP1P16444 411 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 TDO2P48775 406 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 HAND2P61296 217 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 KIAA2012Q0VF49 1180 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 TRDNQ13061 729 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 RAB3GAP1Q15042 981 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 ME3Q16798 604 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 SBK1Q52WX2 424 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 CCDC93Q567U6 631 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 STRIP1Q5VSL9 837 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 USP17L2Q6R6M4 530 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 CLEC17AQ6ZS10 378 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 USP17L1Q7RTZ2 530 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 RALYLQ86SE5 291 aaKnown RBP9.02□□□□□ -0.97
CDC42-205ENST00000498236 TBC1D10CQ8IV04 446 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 PHTF2Q8N3S3 785 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 RNF41Q9H4P4 317 aaPredicted RBP9.02□□□□□ -0.97
CDC42-205ENST00000498236 MKRN1Q9UHC7 482 aaKnown RBP9.02□□□□□ -0.97
CDC42-205ENST00000498236 TPCN1Q9ULQ1 816 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 CD2APQ9Y5K6 639 aa9.02□□□□□ -0.97
CDC42-205ENST00000498236 TNFRSF10AO00220 468 aa9.01□□□□□ -0.97
CDC42-205ENST00000498236 ZBTB7AO95365 584 aa9.01□□□□□ -0.97
CDC42-205ENST00000498236 DYNLL1P63167 89 aaKnown RBP9.01□□□□□ -0.97
CDC42-205ENST00000498236 SH3BP2P78314 561 aa9.01□□□□□ -0.97
CDC42-205ENST00000498236 GTF2IP78347 998 aa9.01□□□□□ -0.97
CDC42-205ENST00000498236 PPARAQ07869 468 aa9.01□□□□□ -0.97
CDC42-205ENST00000498236 GRIK5Q16478 980 aa9.01□□□□□ -0.97
CDC42-205ENST00000498236 C4orf48Q5BLP8 95 aa9.01□□□□□ -0.97
CDC42-205ENST00000498236 AKNAD1Q5T1N1 836 aa9.01□□□□□ -0.97
CDC42-205ENST00000498236 Q6ZUG5 572 aa9.01□□□□□ -0.97
CDC42-205ENST00000498236 ZNF274Q96GC6 653 aaPredicted RBP9.01□□□□□ -0.97
CDC42-205ENST00000498236 NOL10Q9BSC4 688 aaKnown RBP9.01□□□□□ -0.97
CDC42-205ENST00000498236 KRT23Q9C075 422 aa9.01□□□□□ -0.97
CDC42-205ENST00000498236 DCP1AQ9NPI6 582 aaPredicted RBP9.01□□□□□ -0.97
CDC42-205ENST00000498236 AATFQ9NY61 560 aaKnown RBP eCLIP9.01□□□□□ -0.972e-6■■■□□ 17.9
CDC42-205ENST00000498236 ARPP21Q9UBL0 812 aaPredicted RBP9.01□□□□□ -0.97
CDC42-205ENST00000498236 JAG2Q9Y219 1238 aa9.01□□□□□ -0.97
CDC42-205ENST00000498236 USTQ9Y2C2 406 aa9.01□□□□□ -0.97
CDC42-205ENST00000498236 CHD4Q14839 1912 aa9□□□□□ -0.97
CDC42-205ENST00000498236 PRC1O43663 620 aa9□□□□□ -0.97
CDC42-205ENST00000498236 LZTS3O60299 673 aaPredicted RBP9□□□□□ -0.97
CDC42-205ENST00000498236 PFKFB2O60825 505 aa9□□□□□ -0.97
CDC42-205ENST00000498236 LARGE1O95461 756 aa9□□□□□ -0.97
CDC42-205ENST00000498236 ANTXR2P58335 489 aa9□□□□□ -0.97
CDC42-205ENST00000498236 HDLBPQ00341 1268 aaKnown RBP9□□□□□ -0.97
CDC42-205ENST00000498236 R3HDM1Q15032 1099 aaKnown RBP9□□□□□ -0.97
CDC42-205ENST00000498236 MAP7D1Q3KQU3 841 aa9□□□□□ -0.97
CDC42-205ENST00000498236 CTR9Q6PD62 1173 aa9□□□□□ -0.97
CDC42-205ENST00000498236 HHIPL2Q6UWX4 724 aa9□□□□□ -0.97
CDC42-205ENST00000498236 MFSD6Q6ZSS7 791 aa9□□□□□ -0.97
CDC42-205ENST00000498236 NOL8Q76FK4 1167 aaKnown RBP9□□□□□ -0.97
CDC42-205ENST00000498236 CERS5Q8N5B7 392 aa9□□□□□ -0.97
CDC42-205ENST00000498236 KCTD17Q8N5Z5 321 aa9□□□□□ -0.97
CDC42-205ENST00000498236 PLPP7Q8NBV4 271 aa9□□□□□ -0.97
CDC42-205ENST00000498236 SDR42E1Q8WUS8 393 aa9□□□□□ -0.97
CDC42-205ENST00000498236 BRF1Q92994 677 aa9□□□□□ -0.97
CDC42-205ENST00000498236 GTF3C6Q969F1 213 aa9□□□□□ -0.97
CDC42-205ENST00000498236 SLC10A4Q96EP9 437 aa9□□□□□ -0.97
CDC42-205ENST00000498236 TMEM87BQ96K49 555 aa9□□□□□ -0.97
CDC42-205ENST00000498236 TCEANC2Q96MN5 208 aa9□□□□□ -0.97
CDC42-205ENST00000498236 LLPHQ9BRT6 129 aaKnown RBP9□□□□□ -0.97
CDC42-205ENST00000498236 C1QTNF2Q9BXJ5 285 aa9□□□□□ -0.97
CDC42-205ENST00000498236 PIM2Q9P1W9 311 aa9□□□□□ -0.97
CDC42-205ENST00000498236 C21orf2O43822 256 aa8.99□□□□□ -0.97
CDC42-205ENST00000498236 ORC4O43929 436 aa8.99□□□□□ -0.97
CDC42-205ENST00000498236 ECE2O60344 883 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms