RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 FMR1NBQ8N0W7 255 aaPredicted RBP9.39□□□□□ -0.91
SORT1-205ENST00000483508 FBXO18Q8NFZ0 1043 aa9.39□□□□□ -0.91
SORT1-205ENST00000483508 ERO1AQ96HE7 468 aa9.39□□□□□ -0.91
SORT1-205ENST00000483508 CLMNQ96JQ2 1002 aa9.39□□□□□ -0.91
SORT1-205ENST00000483508 TMEM87BQ96K49 555 aa9.39□□□□□ -0.91
SORT1-205ENST00000483508 PRMT6Q96LA8 375 aaPredicted RBP9.39□□□□□ -0.91
SORT1-205ENST00000483508 CFHR5Q9BXR6 569 aa9.39□□□□□ -0.91
SORT1-205ENST00000483508 GOLPH3LQ9H4A5 285 aa9.39□□□□□ -0.91
SORT1-205ENST00000483508 NCOA5Q9HCD5 579 aaKnown RBP9.39□□□□□ -0.91
SORT1-205ENST00000483508 FAM13BQ9NYF5 915 aa9.39□□□□□ -0.91
SORT1-205ENST00000483508 ORC3Q9UBD5 711 aaPredicted RBP9.39□□□□□ -0.91
SORT1-205ENST00000483508 CLIP2Q9UDT6 1046 aa9.39□□□□□ -0.91
SORT1-205ENST00000483508 TTF2Q9UNY4 1162 aaKnown RBP9.39□□□□□ -0.91
SORT1-205ENST00000483508 PCDHAC2Q9Y5I4 1007 aa9.39□□□□□ -0.91
SORT1-205ENST00000483508 ZNF646O15015 1829 aaPredicted RBP9.39□□□□□ -0.91
SORT1-205ENST00000483508 MYH6P13533 1939 aa9.39□□□□□ -0.91
SORT1-205ENST00000483508 MROH5Q6ZUA9 1318 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 UNCXA6NJT0 531 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 WDHD1O75717 1129 aaPredicted RBP9.38□□□□□ -0.91
SORT1-205ENST00000483508 GYG1P46976 350 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 TPM4P67936 248 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 RBM10P98175 930 aaKnown RBP9.38□□□□□ -0.91
SORT1-205ENST00000483508 CEBPZQ03701 1054 aaKnown RBP9.38□□□□□ -0.91
SORT1-205ENST00000483508 UBE4AQ14139 1066 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 ARHGEF6Q15052 776 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 SYCP1Q15431 976 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 SF3A1Q15459 793 aaKnown RBP9.38□□□□□ -0.91
SORT1-205ENST00000483508 SLFNL1Q499Z3 407 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 CAVIN4Q5BKX8 364 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 PRPF38BQ5VTL8 546 aaKnown RBP9.38□□□□□ -0.91
SORT1-205ENST00000483508 MYSM1Q5VVJ2 828 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 VGLL2Q8N8G2 317 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 LINC00301Q8NCQ3 95 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 TIGD1Q96MW7 591 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 TDRD3Q9H7E2 651 aaKnown RBP9.38□□□□□ -0.91
SORT1-205ENST00000483508 ZNF70Q9UC06 446 aaPredicted RBP9.38□□□□□ -0.91
SORT1-205ENST00000483508 PCDHA7Q9UN72 937 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 MYH13Q9UKX3 1938 aa9.38□□□□□ -0.91
SORT1-205ENST00000483508 NID2Q14112 1375 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 STK36Q9NRP7 1315 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 TCP10L2B9ZVM9 353 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 SPTLC2O15270 562 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 USP2O75604 605 aaPredicted RBP9.37□□□□□ -0.91
SORT1-205ENST00000483508 PDE8BO95263 885 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 MCAMP43121 646 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 FOSBP53539 338 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 GSDMDP57764 484 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 ANTXR2P58335 489 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 ZRSR1Q15695 479 aaKnown RBP9.37□□□□□ -0.91
SORT1-205ENST00000483508 SYNE3Q6ZMZ3 975 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 C11orf57Q6ZUT1 292 aaPredicted RBP9.37□□□□□ -0.91
SORT1-205ENST00000483508 OPTNQ96CV9 577 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 MTA3Q9BTC8 594 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 PUS7LQ9H0K6 701 aaKnown RBP9.37□□□□□ -0.91
SORT1-205ENST00000483508 R3HDMLQ9H3Y0 253 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 ELP3Q9H9T3 547 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 KCND1Q9NSA2 647 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 TMOD2Q9NZR1 351 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 PCDH10Q9P2E7 1040 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 IMPACTQ9P2X3 320 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 SERPINA10Q9UK55 444 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 PAXBP1Q9Y5B6 917 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 CSADQ9Y600 493 aa9.37□□□□□ -0.91
SORT1-205ENST00000483508 FAM205AQ6ZU69 1335 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 SMTNL1A8MU46 457 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 IGF2BP3O00425 579 aaKnown RBP eCLIP9.36□□□□□ -0.91
SORT1-205ENST00000483508 SH2B2O14492 632 aaPredicted RBP9.36□□□□□ -0.91
SORT1-205ENST00000483508 PPP6R2O75170 966 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 SLC5A1P13866 664 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 PRKCSHP14314 528 aaPredicted RBP9.36□□□□□ -0.91
SORT1-205ENST00000483508 CMA1P23946 247 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 CRKP46108 304 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 METAP2P50579 478 aaKnown RBP eCLIP9.36□□□□□ -0.91
SORT1-205ENST00000483508 HAND2P61296 217 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 GUCY1B3Q02153 619 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 CRHR2Q13324 411 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 PUM3Q15397 648 aaKnown RBP9.36□□□□□ -0.91
SORT1-205ENST00000483508 SPDYE2Q495Y8 402 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 ANO1Q5XXA6 986 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 CHST3Q7LGC8 479 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 OTOP1Q7RTM1 612 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 DHX40Q8IX18 779 aaKnown RBP9.36□□□□□ -0.91
SORT1-205ENST00000483508 C17orf53Q8N3J3 647 aaPredicted RBP9.36□□□□□ -0.91
SORT1-205ENST00000483508 CD99L2Q8TCZ2 262 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 LPIN2Q92539 896 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 WASF1Q92558 559 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 FAM84BQ96KN1 310 aaPredicted RBP9.36□□□□□ -0.91
SORT1-205ENST00000483508 SDF4Q9BRK5 362 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 CNNM2Q9H8M5 875 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 EFCC1Q9HA90 598 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 ZFYVE28Q9HCC9 887 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 KIAA1468Q9P260 1216 aa9.36□□□□□ -0.91
SORT1-205ENST00000483508 IQSEC3Q9UPP2 1182 aaPredicted RBP9.36□□□□□ -0.91
SORT1-205ENST00000483508 IRS2Q9Y4H2 1338 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 FAM237AA0A1B0GTK4 181 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 KIF2AO00139 706 aaPredicted RBP9.35□□□□□ -0.91
SORT1-205ENST00000483508 CTIFO43310 598 aaKnown RBP9.35□□□□□ -0.91
SORT1-205ENST00000483508 PDE6AP16499 860 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 GNAT2P19087 354 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 FGFR2P21802 821 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms