RNA–Protein interactions for RNA: ENST00000481347.1

TPR-206, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 2,727 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-206ENST00000481347 SMC2O95347 1197 aa12.12□□□□□ -0.47
TPR-206ENST00000481347 PLA2G4AP47712 749 aa12.12□□□□□ -0.47
TPR-206ENST00000481347 TSHZ1Q6ZSZ6 1077 aa12.12□□□□□ -0.47
TPR-206ENST00000481347 DHX40Q8IX18 779 aaKnown RBP12.12□□□□□ -0.47
TPR-206ENST00000481347 IFNL3Q8IZI9 196 aa12.12□□□□□ -0.47
TPR-206ENST00000481347 AOPEPQ8N6M6 819 aa12.12□□□□□ -0.47
TPR-206ENST00000481347 MIEF2Q96C03 454 aa12.12□□□□□ -0.47
TPR-206ENST00000481347 C16orf45Q96MC5 204 aaPredicted RBP12.12□□□□□ -0.47
TPR-206ENST00000481347 FHOD1Q9Y613 1164 aa12.12□□□□□ -0.47
TPR-206ENST00000481347 SPDYE16A6NNV3 312 aaPredicted RBP12.11□□□□□ -0.47
TPR-206ENST00000481347 TPM1P09493 284 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 TPM4P67936 248 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 ZRSR1Q15695 479 aaKnown RBP12.11□□□□□ -0.47
TPR-206ENST00000481347 CCDC144BQ3MJ40 725 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 KRT40Q6A162 431 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 SARM1Q6SZW1 724 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 IGDCC4Q8TDY8 1250 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 ETAA1Q9NY74 926 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 PLCH1Q4KWH8 1693 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 IFIT3O14879 490 aaKnown RBP12.11□□□□□ -0.47
TPR-206ENST00000481347 ADAMTS2O95450 1211 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 ERCC5P28715 1186 aaPredicted RBP12.11□□□□□ -0.47
TPR-206ENST00000481347 MARCKSP29966 332 aaPredicted RBP12.11□□□□□ -0.47
TPR-206ENST00000481347 CDC25BP30305 580 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 IGHMBP2P38935 993 aaKnown RBP12.11□□□□□ -0.47
TPR-206ENST00000481347 BCAMP50895 628 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 ALX1Q15699 326 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 DDB1Q16531 1140 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 RRP12Q5JTH9 1297 aaKnown RBP12.11□□□□□ -0.47
TPR-206ENST00000481347 STK11IPQ8N1F8 1099 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 GJD4Q96KN9 370 aaPredicted RBP12.11□□□□□ -0.47
TPR-206ENST00000481347 LY9Q9HBG7 655 aa12.11□□□□□ -0.47
TPR-206ENST00000481347 MAFBQ9Y5Q3 323 aaPredicted RBP12.11□□□□□ -0.47
TPR-206ENST00000481347 PRKAB2O43741 272 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 PARNO95453 639 aaKnown RBP12.1□□□□□ -0.47
TPR-206ENST00000481347 IARSP41252 1262 aaKnown RBP12.1□□□□□ -0.47
TPR-206ENST00000481347 MNAT1P51948 309 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 IRX1P78414 480 aaPredicted RBP12.1□□□□□ -0.47
TPR-206ENST00000481347 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 VPS37DQ86XT2 251 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 NAT10Q9H0A0 1025 aaKnown RBP12.1□□□□□ -0.47
TPR-206ENST00000481347 NIP7Q9Y221 180 aaKnown RBP eCLIP12.1□□□□□ -0.47
TPR-206ENST00000481347 COL16A1Q07092 1604 aaPredicted RBP12.1□□□□□ -0.47
TPR-206ENST00000481347 BIN1O00499 593 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 TPD52L2O43399 206 aaKnown RBP12.1□□□□□ -0.47
TPR-206ENST00000481347 CAMTA2O94983 1202 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 ELF2Q15723 593 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 CACTINQ8WUQ7 758 aaKnown RBP12.1□□□□□ -0.47
TPR-206ENST00000481347 THOC1Q96FV9 657 aaKnown RBP12.1□□□□□ -0.47
TPR-206ENST00000481347 PIF1Q9H611 641 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 ZSWIM5Q9P217 1185 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 ZNF215Q9UL58 517 aaPredicted RBP12.1□□□□□ -0.47
TPR-206ENST00000481347 ARAP2Q8WZ64 1704 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 LOC102724428A0A0B4J2F2 783 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 CCDC69A6NI79 296 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 ZNF202O95125 648 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 PFKFB1P16118 471 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 SIK1P57059 783 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 ITPK1Q13572 414 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 TRIM29Q14134 588 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 PARP10Q53GL7 1025 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 NLGN1Q8N2Q7 840 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 LCORLQ8N3X6 602 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 KLHL23Q8NBE8 558 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 MRFAP1L1Q96HT8 127 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 SLC26A6Q9BXS9 759 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 KIAA1468Q9P260 1216 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 SLC12A7Q9Y666 1083 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 TACC3Q9Y6A5 838 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 SLC4A4Q9Y6R1 1079 aa12.1□□□□□ -0.47
TPR-206ENST00000481347 GSG1L2A8MUP6 293 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
TPR-206ENST00000481347 WDHD1O75717 1129 aaPredicted RBP12.09□□□□□ -0.47
TPR-206ENST00000481347 SLC3A2P08195 630 aaKnown RBP12.09□□□□□ -0.47
TPR-206ENST00000481347 AKNAD1Q5T1N1 836 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 MFSD6Q6ZSS7 791 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 MIGA1Q8NAN2 632 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 EPS8L1Q8TE68 723 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 ZCCHC17Q9NP64 241 aaKnown RBP12.09□□□□□ -0.47
TPR-206ENST00000481347 MROH7-TTC4A0A0A0MT08 1334 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 UBE2Q2LH0YL09 131 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 NPHP1O15259 732 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 ARID5BQ14865 1188 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 SLC39A14Q15043 492 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 DPCR1Q3MIW9 517 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 AP1ARQ63HQ0 302 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 SGMS1Q86VZ5 419 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 ZKSCAN3Q9BRR0 538 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 LRP2BPQ9P2M1 347 aa12.09□□□□□ -0.47
TPR-206ENST00000481347 WNK3Q9BYP7 1800 aa12.08□□□□□ -0.48
TPR-206ENST00000481347 NTSR2O95665 410 aa12.08□□□□□ -0.48
TPR-206ENST00000481347 USP17L8P0C7I0 530 aa12.08□□□□□ -0.48
TPR-206ENST00000481347 PNMA6AP0CW24 399 aaPredicted RBP12.08□□□□□ -0.48
TPR-206ENST00000481347 CMA1P23946 247 aa12.08□□□□□ -0.48
TPR-206ENST00000481347 CHRNDQ07001 517 aa12.08□□□□□ -0.48
TPR-206ENST00000481347 ADCY2Q08462 1091 aa12.08□□□□□ -0.48
TPR-206ENST00000481347 SSRP1Q08945 709 aaKnown RBP12.08□□□□□ -0.48
TPR-206ENST00000481347 NTRK3Q16288 839 aa12.08□□□□□ -0.48
TPR-206ENST00000481347 FILIP1Q7Z7B0 1213 aa12.08□□□□□ -0.48
TPR-206ENST00000481347 NACAP1Q9BZK3 213 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 546.4 ms