RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ARL4CP56559 192 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 NAA25Q14CX7 972 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 DHX38Q92620 1227 aaKnown RBP5.96□□□□□ -1.46
USF3-202ENST00000478658 CABP1Q9NZU7 370 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 MTMR7Q9Y216 660 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 USTQ9Y2C2 406 aa5.96□□□□□ -1.46
USF3-202ENST00000478658 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 NLRP6P59044 892 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 GUCY1B3Q02153 619 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 KLC3Q6P597 504 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 LRRC43Q8N309 656 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 CALR3Q96L12 384 aaKnown RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 PPANQ9NQ55 473 aaKnown RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 TRPC6Q9Y210 931 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 SMARCA1P28370 1054 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 SPOUT1Q5T280 376 aaKnown RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 FBXL13Q8NEE6 735 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 RASSF5Q8WWW0 418 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 ZNF653Q96CK0 615 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 SENP3Q9H4L4 574 aaPredicted RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 EPB41P11171 864 aaKnown RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 PCYT1AP49585 367 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 CHMP4BP1P59074 171 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 NBPF11Q86T75 865 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 HMG20BQ9P0W2 317 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 IVNS1ABPQ9Y6Y0 642 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 CALUO43852 315 aaPredicted RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 GUCY1B2O75343 617 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 CCDC159P0C7I6 412 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 RAB14P61106 215 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 OCA2Q04671 838 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 ANKRD20A3Q5VUR7 823 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 RPAP2Q8IXW5 612 aaPredicted RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 RASEFQ8IZ41 740 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 BANK1Q8NDB2 785 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 CCT7Q99832 543 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 USP26Q9BXU7 913 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 CRNKL1Q9BZJ0 848 aaKnown RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 RAB17Q9H0T7 212 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 KAT14Q9H8E8 782 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 CABP2Q9NPB3 220 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 RNF14Q9UBS8 474 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 PACSIN3Q9UKS6 424 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 FANCIQ9NVI1 1328 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 WDR64B1ANS9 1081 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 TAF4O00268 1085 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 ECEL1O95672 775 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 RINT1Q6NUQ1 792 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 ZC3H18Q86VM9 953 aaKnown RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 ELMOD1Q8N336 334 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 CNNM3Q8NE01 707 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 MCCC1Q96RQ3 725 aaPredicted RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 FGFR1OP2Q9NVK5 253 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 LZTS1Q9Y250 596 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 H0Y3Z8 333 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 H0YC42 278 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 SMNDC1O75940 238 aaKnown RBP eCLIP5.95□□□□□ -1.46
USF3-202ENST00000478658 BCAP31P51572 246 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 PMS2P54278 862 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 BFSP2Q13515 415 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 SLC12A1Q13621 1099 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 FCHSD1Q86WN1 690 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 SMAP1Q8IYB5 467 aaPredicted RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 FAM71BQ8TC56 605 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 ZKSCAN3Q9BRR0 538 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 PCDHB8Q9UN66 801 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 PCDHB13Q9Y5F0 798 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 APAF1O14727 1248 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 EEF1DP29692 281 aaKnown RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 AP3B2Q13367 1082 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 EZH2Q15910 746 aaKnown RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 E2F4Q16254 413 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 CCNG2Q16589 344 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 CADPS2Q86UW7 1296 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 ZNF274Q96GC6 653 aaPredicted RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 FNBP1Q96RU3 617 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 SARS2Q9NP81 518 aaKnown RBP5.95□□□□□ -1.46
USF3-202ENST00000478658 FOXD4L1Q9NU39 408 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 SEPT3Q9UH03 358 aa5.95□□□□□ -1.46
USF3-202ENST00000478658 AKR1B10O60218 316 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 HIP1RO75146 1068 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 VAMP4O75379 141 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 KRT14P02533 472 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 EEF1GP26641 437 aaKnown RBP5.94□□□□□ -1.46
USF3-202ENST00000478658 GNA11P29992 359 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 GUCA1AP43080 201 aaPredicted RBP5.94□□□□□ -1.46
USF3-202ENST00000478658 SESN2P58004 480 aaPredicted RBP5.94□□□□□ -1.46
USF3-202ENST00000478658 FOPNLQ96NB1 174 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 SLC7A5P2Q9GIP4 190 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 NDE1Q9NXR1 346 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 TTF2Q9UNY4 1162 aaKnown RBP5.94□□□□□ -1.46
USF3-202ENST00000478658 NUP155O75694 1391 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 RSPH10B2B2RC85 870 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 GSTA4O15217 222 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 RSPH10BP0C881 870 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 ATP2B1P20020 1258 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 TCIRG1Q13488 830 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 NBPF1Q3BBV0 1214 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 ZBTB41Q5SVQ8 909 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 NBPF14Q5TI25 921 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms