RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 U3KQE9 123 aa6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 COL17A1Q9UMD9 1497 aaPredicted RBP6.17□□□□□ -1.42
SMARCA1-204ENST00000478420 TMEM265A0A087WTH1 108 aa6.17□□□□□ -1.42
SMARCA1-204ENST00000478420 A0A1W2PQH9 124 aa6.17□□□□□ -1.42
SMARCA1-204ENST00000478420 SSTR4P31391 388 aa6.17□□□□□ -1.42
SMARCA1-204ENST00000478420 MSMPQ1L6U9 139 aa6.17□□□□□ -1.42
SMARCA1-204ENST00000478420 BBS9Q3SYG4 887 aa6.17□□□□□ -1.42
SMARCA1-204ENST00000478420 NBPF12Q5TAG4 269 aaPredicted RBP6.17□□□□□ -1.42
SMARCA1-204ENST00000478420 PIWIL2Q8TC59 973 aaKnown RBP6.17□□□□□ -1.42
SMARCA1-204ENST00000478420 PHAXQ9H814 394 aaKnown RBP6.17□□□□□ -1.42
SMARCA1-204ENST00000478420 SUCOQ9UBS9 1254 aaKnown RBP6.17□□□□□ -1.42
SMARCA1-204ENST00000478420 PPP1R1BQ9UD71 204 aaPredicted RBP6.17□□□□□ -1.42
SMARCA1-204ENST00000478420 R3HCC1Q9Y3T6 440 aaKnown RBP6.17□□□□□ -1.42
SMARCA1-204ENST00000478420 GTF2F1P35269 517 aaKnown RBP eCLIP6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 CD97P48960 835 aa6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 CLCN7P51798 805 aa6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 PMS1P54277 932 aaKnown RBP6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 TNK2Q07912 1038 aa6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 NKPD1Q17RQ9 610 aa6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 SPACA3Q8IXA5 215 aa6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 DTWD2Q8NBA8 298 aa6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 VWCEQ96DN2 955 aa6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 ZNF512BQ96KM6 892 aaPredicted RBP6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 Q96M66 194 aa6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 MKRN2Q9H000 416 aaKnown RBP6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 TNKS2Q9H2K2 1166 aa6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 BSDC1Q9NW68 430 aaPredicted RBP6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 ACTR10Q9NZ32 417 aa6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 PLAGL2Q9UPG8 496 aa6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 SNX11Q9Y5W9 270 aa6.16□□□□□ -1.42
SMARCA1-204ENST00000478420 LRRN2O75325 713 aa6.15□□□□□ -1.42
SMARCA1-204ENST00000478420 CDKAL1Q5VV42 579 aa6.15□□□□□ -1.42
SMARCA1-204ENST00000478420 ANKS3Q6ZW76 656 aa6.15□□□□□ -1.42
SMARCA1-204ENST00000478420 CCDC144CPQ8IYA2 1237 aa6.15□□□□□ -1.42
SMARCA1-204ENST00000478420 SMARCC1Q92922 1105 aaPredicted RBP6.15□□□□□ -1.42
SMARCA1-204ENST00000478420 ARMC5Q96C12 935 aa6.15□□□□□ -1.42
SMARCA1-204ENST00000478420 MISP3Q96FF7 219 aa6.15□□□□□ -1.42
SMARCA1-204ENST00000478420 HRASLS5Q96KN8 279 aa6.15□□□□□ -1.42
SMARCA1-204ENST00000478420 ASCC2Q9H1I8 757 aaPredicted RBP6.15□□□□□ -1.42
SMARCA1-204ENST00000478420 ZNF214Q9UL59 606 aaPredicted RBP6.15□□□□□ -1.42
SMARCA1-204ENST00000478420 LTBP3Q9NS15 1303 aa6.15□□□□□ -1.43
SMARCA1-204ENST00000478420 MED26O95402 600 aa6.14□□□□□ -1.43
SMARCA1-204ENST00000478420 GNPTABQ3T906 1256 aa6.14□□□□□ -1.43
SMARCA1-204ENST00000478420 TDRD10Q5VZ19 366 aaKnown RBP6.14□□□□□ -1.43
SMARCA1-204ENST00000478420 DTX1Q86Y01 620 aa6.14□□□□□ -1.43
SMARCA1-204ENST00000478420 CKAP2LQ8IYA6 745 aa6.14□□□□□ -1.43
SMARCA1-204ENST00000478420 STK11IPQ8N1F8 1099 aa6.14□□□□□ -1.43
SMARCA1-204ENST00000478420 DRC1Q96MC2 740 aa6.14□□□□□ -1.43
SMARCA1-204ENST00000478420 HIRIP3Q9BW71 556 aaPredicted RBP6.14□□□□□ -1.43
SMARCA1-204ENST00000478420 PCMTD2Q9NV79 361 aa6.14□□□□□ -1.43
SMARCA1-204ENST00000478420 VAV3Q9UKW4 847 aa6.14□□□□□ -1.43
SMARCA1-204ENST00000478420 ST14Q9Y5Y6 855 aa6.14□□□□□ -1.43
SMARCA1-204ENST00000478420 SCO2A0A1W2PP80 73 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 KIAA1324LA8MWY0 1029 aaPredicted RBP6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 C9IYK1 514 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 TP53P04637 393 aaPredicted RBP6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 SPINK2P20155 84 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 SLC7A5Q01650 507 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 PRKCQQ04759 706 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 LRP8Q14114 963 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 FXNQ16595 210 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 AOC3Q16853 763 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 NBPF9Q3BBW0 867 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 LARP1BQ659C4 914 aaKnown RBP6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 VHLLQ6RSH7 139 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 Q8N3U1 123 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 HNRNPLLQ8WVV9 542 aaKnown RBP6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 DHX38Q92620 1227 aaKnown RBP6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 HSPA12BQ96MM6 686 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 TRIT1Q9H3H1 467 aaKnown RBP6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 FAM86C1Q9NVL1 165 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 GPATCH2Q9NW75 528 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 PCDHB10Q9UN67 800 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 PCDHB12Q9Y5F1 795 aa6.13□□□□□ -1.43
SMARCA1-204ENST00000478420 H3BS24 57 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 RBAK-RBAKDNI3L0D1 243 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 PRNPP04156 253 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 AUHQ13825 339 aaKnown RBP6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 NCAPHQ15003 741 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 CLEC16AQ2KHT3 1053 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 THAP5Q7Z6K1 395 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 VSIG10LQ86VR7 867 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 PPFIBP1Q86W92 1011 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 C7orf61Q8IZ16 206 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 ASB11Q8WXH4 323 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 TRIM55Q9BYV6 548 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 GPR62Q9BZJ7 368 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 ZSWIM5Q9P217 1185 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 FBXL21Q9UKT6 434 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 ANGEL1Q9UNK9 670 aaKnown RBP6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 SLC5A6Q9Y289 635 aa6.12□□□□□ -1.43
SMARCA1-204ENST00000478420 PITPNM2Q9BZ72 1349 aa6.11□□□□□ -1.43
SMARCA1-204ENST00000478420 KLF4O43474 513 aa6.11□□□□□ -1.43
SMARCA1-204ENST00000478420 NMIQ13287 307 aaPredicted RBP6.11□□□□□ -1.43
SMARCA1-204ENST00000478420 ANKRD39Q53RE8 183 aa6.11□□□□□ -1.43
SMARCA1-204ENST00000478420 AXDND1Q5T1B0 1012 aaPredicted RBP6.11□□□□□ -1.43
SMARCA1-204ENST00000478420 KIAA1211LQ6NV74 962 aa6.11□□□□□ -1.43
SMARCA1-204ENST00000478420 BCL7CQ8WUZ0 217 aaPredicted RBP6.11□□□□□ -1.43
SMARCA1-204ENST00000478420 UBE2FQ969M7 185 aa6.11□□□□□ -1.43
SMARCA1-204ENST00000478420 PRDM14Q9GZV8 571 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms