RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ZCCHC17Q9NP64 241 aaKnown RBP17.64■□□□□ 0.41
CDC42SE1-203ENST00000470278 TOMM22Q9NS69 142 aa17.64■□□□□ 0.41
CDC42SE1-203ENST00000470278 MTMR4Q9NYA4 1195 aa17.64■□□□□ 0.41
CDC42SE1-203ENST00000470278 TAF6LQ9Y6J9 622 aa17.64■□□□□ 0.41
CDC42SE1-203ENST00000470278 E7EWF7 191 aa17.63■□□□□ 0.41
CDC42SE1-203ENST00000470278 USP14P54578 494 aa17.63■□□□□ 0.41
CDC42SE1-203ENST00000470278 TRDNQ13061 729 aa17.63■□□□□ 0.41
CDC42SE1-203ENST00000470278 RRP12Q5JTH9 1297 aaKnown RBP17.63■□□□□ 0.41
CDC42SE1-203ENST00000470278 STOX1Q6ZVD7 989 aa17.63■□□□□ 0.41
CDC42SE1-203ENST00000470278 FASTKD5Q7L8L6 764 aaKnown RBP17.63■□□□□ 0.41
CDC42SE1-203ENST00000470278 CLEC10AQ8IUN9 316 aa17.63■□□□□ 0.41
CDC42SE1-203ENST00000470278 NYAP2Q9P242 653 aa17.63■□□□□ 0.41
CDC42SE1-203ENST00000470278 TMX2Q9Y320 296 aa17.63■□□□□ 0.41
CDC42SE1-203ENST00000470278 TRIM17Q9Y577 477 aa17.63■□□□□ 0.41
CDC42SE1-203ENST00000470278 A0A1W2PRG0 241 aa17.62■□□□□ 0.41
CDC42SE1-203ENST00000470278 B4E1Z4 1266 aa17.62■□□□□ 0.41
CDC42SE1-203ENST00000470278 KDM4AO75164 1064 aa17.62■□□□□ 0.41
CDC42SE1-203ENST00000470278 TTLL1O95922 423 aa17.62■□□□□ 0.41
CDC42SE1-203ENST00000470278 EEF2P13639 858 aaKnown RBP17.62■□□□□ 0.41
CDC42SE1-203ENST00000470278 ZKSCAN1P17029 563 aaPredicted RBP17.62■□□□□ 0.41
CDC42SE1-203ENST00000470278 NCOA7Q8NI08 942 aa17.62■□□□□ 0.41
CDC42SE1-203ENST00000470278 ACER1Q8TDN7 264 aa17.62■□□□□ 0.41
CDC42SE1-203ENST00000470278 MKL1Q969V6 931 aa17.62■□□□□ 0.41
CDC42SE1-203ENST00000470278 FEZ1Q99689 392 aa17.62■□□□□ 0.41
CDC42SE1-203ENST00000470278 USP26Q9BXU7 913 aa17.62■□□□□ 0.41
CDC42SE1-203ENST00000470278 IL17RBQ9NRM6 502 aa17.62■□□□□ 0.41
CDC42SE1-203ENST00000470278 SLC45A1Q9Y2W3 748 aa17.62■□□□□ 0.41
CDC42SE1-203ENST00000470278 HMGCS2P54868 508 aa17.61■□□□□ 0.41
CDC42SE1-203ENST00000470278 KRT32Q14532 448 aa17.61■□□□□ 0.41
CDC42SE1-203ENST00000470278 USP17L2Q6R6M4 530 aa17.61■□□□□ 0.41
CDC42SE1-203ENST00000470278 RALYLQ86SE5 291 aaKnown RBP17.61■□□□□ 0.41
CDC42SE1-203ENST00000470278 ANKRD23Q86SG2 305 aa17.61■□□□□ 0.41
CDC42SE1-203ENST00000470278 IQCA1Q86XH1 822 aa17.61■□□□□ 0.41
CDC42SE1-203ENST00000470278 NKX2-3Q8TAU0 364 aa17.61■□□□□ 0.41
CDC42SE1-203ENST00000470278 LPAR1Q92633 364 aa17.61■□□□□ 0.41
CDC42SE1-203ENST00000470278 ARMC5Q96C12 935 aa17.61■□□□□ 0.41
CDC42SE1-203ENST00000470278 AGTPBP1Q9UPW5 1226 aa17.61■□□□□ 0.41
CDC42SE1-203ENST00000470278 PTPN22Q9Y2R2 807 aa17.61■□□□□ 0.41
CDC42SE1-203ENST00000470278 CCDC178Q5BJE1 867 aa17.6■□□□□ 0.41
CDC42SE1-203ENST00000470278 OTUD7BQ6GQQ9 843 aa17.6■□□□□ 0.41
CDC42SE1-203ENST00000470278 MB21D2Q8IYB1 491 aaPredicted RBP17.6■□□□□ 0.41
CDC42SE1-203ENST00000470278 FAM43AQ8N2R8 423 aa17.6■□□□□ 0.41
CDC42SE1-203ENST00000470278 TTC14Q96N46 770 aa17.6■□□□□ 0.41
CDC42SE1-203ENST00000470278 EMILIN3Q9NT22 766 aa17.6■□□□□ 0.41
CDC42SE1-203ENST00000470278 TMOD4Q9NZQ9 345 aa17.6■□□□□ 0.41
CDC42SE1-203ENST00000470278 ZSWIM5Q9P217 1185 aa17.6■□□□□ 0.41
CDC42SE1-203ENST00000470278 RANBP2P49792 3224 aaKnown RBP17.59■□□□□ 0.41
CDC42SE1-203ENST00000470278 MGAMO43451 1857 aa17.59■□□□□ 0.41
CDC42SE1-203ENST00000470278 BTBD19C9JJ37 291 aa17.59■□□□□ 0.41
CDC42SE1-203ENST00000470278 NMT2O60551 498 aa17.59■□□□□ 0.41
CDC42SE1-203ENST00000470278 MCCP23508 829 aa17.59■□□□□ 0.41
CDC42SE1-203ENST00000470278 GPAT2Q6NUI2 795 aa17.59■□□□□ 0.41
CDC42SE1-203ENST00000470278 DGKHQ86XP1 1220 aa17.59■□□□□ 0.41
CDC42SE1-203ENST00000470278 RASEFQ8IZ41 740 aa17.59■□□□□ 0.41
CDC42SE1-203ENST00000470278 GMCL1P1Q8NEA9 526 aa17.59■□□□□ 0.41
CDC42SE1-203ENST00000470278 MTA3Q9BTC8 594 aa17.59■□□□□ 0.41
CDC42SE1-203ENST00000470278 VCPKMTQ9H867 229 aa17.59■□□□□ 0.41
CDC42SE1-203ENST00000470278 STX8Q9UNK0 236 aa17.59■□□□□ 0.41
CDC42SE1-203ENST00000470278 TRIOBPQ9H2D6 2365 aa17.59■□□□□ 0.41
CDC42SE1-203ENST00000470278 WDR19Q8NEZ3 1342 aa17.58■□□□□ 0.4
CDC42SE1-203ENST00000470278 VCAM1P19320 739 aa17.58■□□□□ 0.4
CDC42SE1-203ENST00000470278 RCSD1Q6JBY9 416 aa17.58■□□□□ 0.4
CDC42SE1-203ENST00000470278 GADL1Q6ZQY3 521 aa17.58■□□□□ 0.4
CDC42SE1-203ENST00000470278 ANKS1AQ92625 1134 aa17.58■□□□□ 0.4
CDC42SE1-203ENST00000470278 ZSCAN10Q96SZ4 725 aaPredicted RBP17.58■□□□□ 0.4
CDC42SE1-203ENST00000470278 UBAC1Q9BSL1 405 aa17.58■□□□□ 0.4
CDC42SE1-203ENST00000470278 GOPCQ9HD26 462 aa17.58■□□□□ 0.4
CDC42SE1-203ENST00000470278 CLIP2Q9UDT6 1046 aa17.58■□□□□ 0.4
CDC42SE1-203ENST00000470278 PARP14Q460N5 1801 aa17.58■□□□□ 0.4
CDC42SE1-203ENST00000470278 TNKSO95271 1327 aa17.57■□□□□ 0.4
CDC42SE1-203ENST00000470278 HOXA7P31268 230 aaPredicted RBP17.57■□□□□ 0.4
CDC42SE1-203ENST00000470278 ATP2B2Q01814 1243 aa17.57■□□□□ 0.4
CDC42SE1-203ENST00000470278 PABPC4Q13310 644 aaKnown RBP eCLIP17.57■□□□□ 0.4
CDC42SE1-203ENST00000470278 TREML2Q5T2D2 321 aa17.57■□□□□ 0.4
CDC42SE1-203ENST00000470278 CYB5R4Q7L1T6 521 aa17.57■□□□□ 0.4
CDC42SE1-203ENST00000470278 ENAHQ8N8S7 591 aaPredicted RBP17.57■□□□□ 0.4
CDC42SE1-203ENST00000470278 ERO1AQ96HE7 468 aa17.57■□□□□ 0.4
CDC42SE1-203ENST00000470278 SNX14Q9Y5W7 946 aa17.57■□□□□ 0.4
CDC42SE1-203ENST00000470278 A0A0G2JMZ2 1700 aa17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 PDHXO00330 501 aa17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 WDR46O15213 610 aaKnown RBP17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 SEC24BO95487 1268 aa17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 HMGB1P09429 215 aaKnown RBP17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 TOP1P11387 765 aaKnown RBP17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 MCM5P33992 734 aa17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 ANTXR2P58335 489 aa17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 ANAPC15P60006 121 aa17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 SP3Q02447 781 aa17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 ZYXQ15942 572 aaKnown RBP17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 LRRC47Q8N1G4 583 aaKnown RBP17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 IL17RAQ96F46 866 aa17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 NEK1Q96PY6 1258 aa17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 ARHGAP39Q9C0H5 1083 aa17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 PNMA3Q9UL41 463 aa17.56■□□□□ 0.4
CDC42SE1-203ENST00000470278 ADGRA2Q96PE1 1338 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 F5H6K3 240 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 NDUFB10O96000 172 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 CTGFP29279 349 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 KLRC3Q07444 240 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 SART3Q15020 963 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms