RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CIAO1O76071 339 aa12.66□□□□□ -0.38
HDAC3-203ENST00000467533 ACRP10323 421 aa12.66□□□□□ -0.38
HDAC3-203ENST00000467533 VCAM1P19320 739 aa12.66□□□□□ -0.38
HDAC3-203ENST00000467533 RASIP1Q5U651 963 aa12.66□□□□□ -0.38
HDAC3-203ENST00000467533 LBX2Q6XYB7 198 aa12.66□□□□□ -0.38
HDAC3-203ENST00000467533 ANKRD33Q7Z3H0 272 aa12.66□□□□□ -0.38
HDAC3-203ENST00000467533 TOX2Q96NM4 488 aa12.66□□□□□ -0.38
HDAC3-203ENST00000467533 STARD7Q9NQZ5 370 aa12.66□□□□□ -0.38
HDAC3-203ENST00000467533 RAI14Q9P0K7 980 aa12.66□□□□□ -0.38
HDAC3-203ENST00000467533 XIRP2A4UGR9 3374 aa12.66□□□□□ -0.38
HDAC3-203ENST00000467533 STRNO43815 780 aa12.65□□□□□ -0.38
HDAC3-203ENST00000467533 GH2P01242 217 aa12.65□□□□□ -0.38
HDAC3-203ENST00000467533 CSF2RAP15509 400 aa12.65□□□□□ -0.38
HDAC3-203ENST00000467533 USP14P54578 494 aa12.65□□□□□ -0.38
HDAC3-203ENST00000467533 PPP2R2DQ66LE6 453 aa12.65□□□□□ -0.38
HDAC3-203ENST00000467533 ZNF365Q70YC5 407 aa12.65□□□□□ -0.38
HDAC3-203ENST00000467533 C16orf59Q7L2K0 433 aa12.65□□□□□ -0.38
HDAC3-203ENST00000467533 MAPKAPK5Q8IW41 473 aa12.65□□□□□ -0.38
HDAC3-203ENST00000467533 TMEM199Q8N511 208 aa12.65□□□□□ -0.38
HDAC3-203ENST00000467533 HERVK_113Q902F9 699 aa12.65□□□□□ -0.38
HDAC3-203ENST00000467533 NSUN4Q96CB9 384 aaKnown RBP12.65□□□□□ -0.38
HDAC3-203ENST00000467533 MOV10L1Q9BXT6 1211 aaKnown RBP12.65□□□□□ -0.38
HDAC3-203ENST00000467533 MTIF3Q9H2K0 278 aaKnown RBP12.65□□□□□ -0.38
HDAC3-203ENST00000467533 RPAP3Q9H6T3 665 aaPredicted RBP12.65□□□□□ -0.38
HDAC3-203ENST00000467533 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
HDAC3-203ENST00000467533 TBX21Q9UL17 535 aa12.65□□□□□ -0.38
HDAC3-203ENST00000467533 YBX2Q9Y2T7 364 aaKnown RBP12.65□□□□□ -0.38
HDAC3-203ENST00000467533 FLT1P17948 1338 aa12.64□□□□□ -0.39
HDAC3-203ENST00000467533 SMCHD1A6NHR9 2005 aa12.64□□□□□ -0.39
HDAC3-203ENST00000467533 COBLO75128 1261 aa12.64□□□□□ -0.39
HDAC3-203ENST00000467533 IL15P40933 162 aaPredicted RBP12.64□□□□□ -0.39
HDAC3-203ENST00000467533 FOXP4Q8IVH2 680 aaPredicted RBP12.64□□□□□ -0.39
HDAC3-203ENST00000467533 NUP133Q8WUM0 1156 aa12.64□□□□□ -0.39
HDAC3-203ENST00000467533 KHSRPQ92945 711 aaKnown RBP eCLIP12.64□□□□□ -0.39
HDAC3-203ENST00000467533 MAML3Q96JK9 1138 aa12.64□□□□□ -0.39
HDAC3-203ENST00000467533 PPP1R12CQ9BZL4 782 aa12.64□□□□□ -0.39
HDAC3-203ENST00000467533 PRKRIP1Q9H875 184 aaPredicted RBP12.64□□□□□ -0.39
HDAC3-203ENST00000467533 CHD7Q9P2D1 2997 aa12.64□□□□□ -0.39
HDAC3-203ENST00000467533 MYH1P12882 1939 aa12.64□□□□□ -0.39
HDAC3-203ENST00000467533 MROH7Q68CQ1 1323 aa12.63□□□□□ -0.39
HDAC3-203ENST00000467533 ZNF521Q96K83 1311 aa12.63□□□□□ -0.39
HDAC3-203ENST00000467533 SMIM22K7EJ46 135 aa12.63□□□□□ -0.39
HDAC3-203ENST00000467533 HLA-DOAP06340 250 aa12.63□□□□□ -0.39
HDAC3-203ENST00000467533 ERCC3P19447 782 aa12.63□□□□□ -0.39
HDAC3-203ENST00000467533 ACLYP53396 1101 aa12.63□□□□□ -0.39
HDAC3-203ENST00000467533 MVPQ14764 893 aaKnown RBP12.63□□□□□ -0.39
HDAC3-203ENST00000467533 RAB3GAP1Q15042 981 aa12.63□□□□□ -0.39
HDAC3-203ENST00000467533 TBC1D9Q6ZT07 1266 aa12.63□□□□□ -0.39
HDAC3-203ENST00000467533 TGFBRAP1Q8WUH2 860 aa12.63□□□□□ -0.39
HDAC3-203ENST00000467533 LENG1Q96BZ8 264 aaPredicted RBP12.63□□□□□ -0.39
HDAC3-203ENST00000467533 SPATC1LQ9H0A9 340 aa12.63□□□□□ -0.39
HDAC3-203ENST00000467533 USP44Q9H0E7 712 aa12.63□□□□□ -0.39
HDAC3-203ENST00000467533 AATFQ9NY61 560 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC3-203ENST00000467533 SAP30BPQ9UHR5 308 aaKnown RBP12.63□□□□□ -0.39
HDAC3-203ENST00000467533 PALD1Q9ULE6 856 aa12.63□□□□□ -0.39
HDAC3-203ENST00000467533 ROBO3Q96MS0 1386 aa12.63□□□□□ -0.39
HDAC3-203ENST00000467533 ZNFX1Q9P2E3 1918 aaKnown RBP12.62□□□□□ -0.39
HDAC3-203ENST00000467533 GTPBP6O43824 516 aaPredicted RBP12.62□□□□□ -0.39
HDAC3-203ENST00000467533 PLCG2P16885 1265 aa12.62□□□□□ -0.39
HDAC3-203ENST00000467533 TIMM10P62072 90 aa12.62□□□□□ -0.39
HDAC3-203ENST00000467533 PLS1Q14651 629 aa12.62□□□□□ -0.39
HDAC3-203ENST00000467533 PI16Q6UXB8 463 aa12.62□□□□□ -0.39
HDAC3-203ENST00000467533 ATF7IPQ6VMQ6 1270 aa12.62□□□□□ -0.39
HDAC3-203ENST00000467533 METTL16Q86W50 562 aaKnown RBP12.62□□□□□ -0.39
HDAC3-203ENST00000467533 NCAPG2Q86XI2 1143 aa12.62□□□□□ -0.39
HDAC3-203ENST00000467533 SHCBP1Q8NEM2 672 aa12.62□□□□□ -0.39
HDAC3-203ENST00000467533 KIAA1683Q9H0B3 1180 aa12.62□□□□□ -0.39
HDAC3-203ENST00000467533 HMG20BQ9P0W2 317 aa12.62□□□□□ -0.39
HDAC3-203ENST00000467533 NRBP1Q9UHY1 535 aa12.62□□□□□ -0.39
HDAC3-203ENST00000467533 COG5Q9UP83 839 aa12.62□□□□□ -0.39
HDAC3-203ENST00000467533 SALL2Q9Y467 1007 aaPredicted RBP12.62□□□□□ -0.39
HDAC3-203ENST00000467533 TRANK1O15050 2925 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 A0A1B0GUL7 405 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 TLL1O43897 1013 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 ADAMTS4O75173 837 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 BAG3O95817 575 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 AKR1A1P14550 325 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 RABGGTBP53611 331 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 WDR63Q8IWG1 891 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 SPATA5Q8NB90 893 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 XAGE2Q96GT9 111 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 UIMC1Q96RL1 719 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 TSEN34Q9BSV6 310 aaKnown RBP12.61□□□□□ -0.39
HDAC3-203ENST00000467533 TANGO6Q9C0B7 1094 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 IL23AQ9NPF7 189 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 PA2G4Q9UQ80 394 aaKnown RBP12.61□□□□□ -0.39
HDAC3-203ENST00000467533 SYNRGQ9UMZ2 1314 aa12.61□□□□□ -0.39
HDAC3-203ENST00000467533 COL4A4P53420 1690 aaPredicted RBP12.61□□□□□ -0.39
HDAC3-203ENST00000467533 MOXD2PA6NHM9 499 aa12.6□□□□□ -0.39
HDAC3-203ENST00000467533 PRR33A8MZF0 331 aa12.6□□□□□ -0.39
HDAC3-203ENST00000467533 PI4K2BG5E9Z4 385 aa12.6□□□□□ -0.39
HDAC3-203ENST00000467533 NHLH1Q02575 133 aa12.6□□□□□ -0.39
HDAC3-203ENST00000467533 ABRAQ8N0Z2 381 aa12.6□□□□□ -0.39
HDAC3-203ENST00000467533 GLT1D1Q96MS3 346 aa12.6□□□□□ -0.39
HDAC3-203ENST00000467533 MROH8Q9H579 483 aa12.6□□□□□ -0.39
HDAC3-203ENST00000467533 LRP2BPQ9P2M1 347 aa12.6□□□□□ -0.39
HDAC3-203ENST00000467533 TLR3O15455 904 aaKnown RBP12.59□□□□□ -0.39
HDAC3-203ENST00000467533 FGBP02675 491 aa12.59□□□□□ -0.39
HDAC3-203ENST00000467533 FCER1AP12319 257 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms