RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CHD4Q14839 1912 aa22.19■■□□□ 1.14
CNEP1R1-203ENST00000458059 MFAP3LO75121 409 aa22.18■■□□□ 1.14
CNEP1R1-203ENST00000458059 KRT31Q15323 416 aa22.18■■□□□ 1.14
CNEP1R1-203ENST00000458059 TRIML1Q8N9V2 468 aa22.18■■□□□ 1.14
CNEP1R1-203ENST00000458059 ZNF579Q8NAF0 562 aaKnown RBP22.18■■□□□ 1.14
CNEP1R1-203ENST00000458059 FUT8Q9BYC5 575 aa22.18■■□□□ 1.14
CNEP1R1-203ENST00000458059 AATFQ9NY61 560 aaKnown RBP eCLIP22.18■■□□□ 1.14
CNEP1R1-203ENST00000458059 MYH8P13535 1937 aa22.18■■□□□ 1.14
CNEP1R1-203ENST00000458059 XDHP47989 1333 aa22.18■■□□□ 1.14
CNEP1R1-203ENST00000458059 TRIM49BA6NDI0 452 aa22.18■■□□□ 1.14
CNEP1R1-203ENST00000458059 USP17L12C9JPN9 530 aa22.18■■□□□ 1.14
CNEP1R1-203ENST00000458059 USP17L21D6R901 530 aa22.18■■□□□ 1.14
CNEP1R1-203ENST00000458059 MYO1BO43795 1136 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 TPM1P09493 284 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 GNAT2P19087 354 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 LMAN1P49257 510 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 NLRP5P59047 1200 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 ERVK-24P63145 666 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 TMTC2Q8N394 836 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 RNF26Q9BY78 433 aaPredicted RBP22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 ENC1O14682 589 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 N4BP1O75113 896 aaKnown RBP22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 CYP2D6P10635 497 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 TXLNAP40222 546 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 RABGGTAQ92696 567 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 GPKOWQ92917 476 aaPredicted RBP eCLIP22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 PHF20Q9BVI0 1012 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 PDE11AQ9HCR9 933 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 NCAPH2Q6IBW4 605 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 SPATA20Q8TB22 786 aa22.17■■□□□ 1.14
CNEP1R1-203ENST00000458059 PP2D1A8MPX8 630 aa22.16■■□□□ 1.14
CNEP1R1-203ENST00000458059 CHP1Q99653 195 aa22.16■■□□□ 1.14
CNEP1R1-203ENST00000458059 MTRQ99707 1265 aa22.16■■□□□ 1.14
CNEP1R1-203ENST00000458059 GUCA1BQ9UMX6 200 aa22.16■■□□□ 1.14
CNEP1R1-203ENST00000458059 MYH6P13533 1939 aa22.16■■□□□ 1.14
CNEP1R1-203ENST00000458059 BAZ2AQ9UIF9 1905 aaKnown RBP22.16■■□□□ 1.14
CNEP1R1-203ENST00000458059 C3orf67Q6ZVT6 689 aa22.16■■□□□ 1.14
CNEP1R1-203ENST00000458059 SRBD1Q8N5C6 995 aaKnown RBP22.16■■□□□ 1.14
CNEP1R1-203ENST00000458059 PANX2Q96RD6 677 aa22.16■■□□□ 1.14
CNEP1R1-203ENST00000458059 KLRK1P26718 216 aa22.15■■□□□ 1.14
CNEP1R1-203ENST00000458059 ATP6V1AP38606 617 aa22.15■■□□□ 1.14
CNEP1R1-203ENST00000458059 CCDC152Q4G0S7 254 aa22.15■■□□□ 1.14
CNEP1R1-203ENST00000458059 SRGAP1Q7Z6B7 1085 aa22.15■■□□□ 1.14
CNEP1R1-203ENST00000458059 GDAP1L1Q96MZ0 367 aa22.15■■□□□ 1.14
CNEP1R1-203ENST00000458059 ANKZF1Q9H8Y5 726 aa22.15■■□□□ 1.14
CNEP1R1-203ENST00000458059 SLIT2O94813 1529 aa22.15■■□□□ 1.14
CNEP1R1-203ENST00000458059 MYH3P11055 1940 aa22.15■■□□□ 1.14
CNEP1R1-203ENST00000458059 IQCA1Q86XH1 822 aa22.15■■□□□ 1.14
CNEP1R1-203ENST00000458059 PNPLA7Q6ZV29 1317 aa22.15■■□□□ 1.14
CNEP1R1-203ENST00000458059 IL17AQ16552 155 aa22.14■■□□□ 1.14
CNEP1R1-203ENST00000458059 NELFBQ8WX92 580 aa22.14■■□□□ 1.14
CNEP1R1-203ENST00000458059 BRMS1Q9HCU9 246 aa22.14■■□□□ 1.14
CNEP1R1-203ENST00000458059 VPS18Q9P253 973 aa22.14■■□□□ 1.14
CNEP1R1-203ENST00000458059 KRT9P35527 623 aa22.14■■□□□ 1.13
CNEP1R1-203ENST00000458059 CDKAL1Q5VV42 579 aa22.14■■□□□ 1.13
CNEP1R1-203ENST00000458059 JAKMIP3Q5VZ66 844 aa22.14■■□□□ 1.13
CNEP1R1-203ENST00000458059 RGS22Q8NE09 1264 aa22.14■■□□□ 1.13
CNEP1R1-203ENST00000458059 HDAC6Q9UBN7 1215 aa22.14■■□□□ 1.13
CNEP1R1-203ENST00000458059 CTAGE9A4FU28 777 aa22.14■■□□□ 1.13
CNEP1R1-203ENST00000458059 UBXN1Q04323 297 aa22.14■■□□□ 1.13
CNEP1R1-203ENST00000458059 FUT2Q10981 343 aa22.14■■□□□ 1.13
CNEP1R1-203ENST00000458059 ABCB6Q9NP58 842 aa22.14■■□□□ 1.13
CNEP1R1-203ENST00000458059 CDC23Q9UJX2 597 aa22.14■■□□□ 1.13
CNEP1R1-203ENST00000458059 IL6STP40189 918 aaPredicted RBP22.13■■□□□ 1.13
CNEP1R1-203ENST00000458059 TROAPQ12815 778 aa22.13■■□□□ 1.13
CNEP1R1-203ENST00000458059 SKIDA1Q1XH10 827 aa22.13■■□□□ 1.13
CNEP1R1-203ENST00000458059 NOA1Q8NC60 698 aaKnown RBP22.13■■□□□ 1.13
CNEP1R1-203ENST00000458059 TFCP2L1Q9NZI6 479 aa22.13■■□□□ 1.13
CNEP1R1-203ENST00000458059 RTL9Q8NET4 1388 aa22.13■■□□□ 1.13
CNEP1R1-203ENST00000458059 IRX5P78411 483 aaPredicted RBP22.13■■□□□ 1.13
CNEP1R1-203ENST00000458059 NPY5RQ15761 445 aa22.13■■□□□ 1.13
CNEP1R1-203ENST00000458059 CALCOCO1Q9P1Z2 691 aa22.13■■□□□ 1.13
CNEP1R1-203ENST00000458059 NUP98P52948 1817 aa22.13■■□□□ 1.13
CNEP1R1-203ENST00000458059 PAPPAQ13219 1627 aa22.13■■□□□ 1.13
CNEP1R1-203ENST00000458059 EXOC5O00471 708 aa22.12■■□□□ 1.13
CNEP1R1-203ENST00000458059 CRKLP46109 303 aaKnown RBP22.12■■□□□ 1.13
CNEP1R1-203ENST00000458059 TAF3Q5VWG9 929 aa22.12■■□□□ 1.13
CNEP1R1-203ENST00000458059 SHANK3Q9BYB0 1731 aa22.12■■□□□ 1.13
CNEP1R1-203ENST00000458059 LRP6O75581 1613 aa22.12■■□□□ 1.13
CNEP1R1-203ENST00000458059 VSNL1P62760 191 aa22.12■■□□□ 1.13
CNEP1R1-203ENST00000458059 SH3RF1Q7Z6J0 888 aa22.12■■□□□ 1.13
CNEP1R1-203ENST00000458059 CTCFLQ8NI51 663 aaPredicted RBP22.12■■□□□ 1.13
CNEP1R1-203ENST00000458059 ZNF384Q8TF68 577 aa22.12■■□□□ 1.13
CNEP1R1-203ENST00000458059 CAPZA3Q96KX2 299 aa22.12■■□□□ 1.13
CNEP1R1-203ENST00000458059 GSDMAQ96QA5 445 aa22.12■■□□□ 1.13
CNEP1R1-203ENST00000458059 ABHD10Q9NUJ1 306 aa22.12■■□□□ 1.13
CNEP1R1-203ENST00000458059 KCNJ18B7U540 433 aa22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 SRGAP2O75044 1071 aa22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 PBX1P40424 430 aa22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 COPB1P53618 953 aaKnown RBP22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 KCNJ12Q14500 433 aa22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 RIOK1Q9BRS2 568 aaKnown RBP22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 VGLL3A8MV65 326 aa22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 PRPF3O43395 683 aaKnown RBP22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 CNGA4Q8IV77 575 aa22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 IQUBQ8NA54 791 aa22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 ZMYND10O75800 440 aa22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 ERCC3P19447 782 aa22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 PAK1Q13153 545 aa22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 CTR9Q6PD62 1173 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms