RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ZNF219Q9P2Y4 722 aaPredicted RBP16.93■□□□□ 0.3
SF1-211ENST00000448404 MKRN1Q9UHC7 482 aaKnown RBP16.93■□□□□ 0.3
SF1-211ENST00000448404 MAPK8IP1Q9UQF2 711 aa16.93■□□□□ 0.3
SF1-211ENST00000448404 CYTH3O43739 400 aa16.93■□□□□ 0.3
SF1-211ENST00000448404 TPM3P06753 285 aa16.93■□□□□ 0.3
SF1-211ENST00000448404 UIMC1Q96RL1 719 aa16.93■□□□□ 0.3
SF1-211ENST00000448404 KAT14Q9H8E8 782 aa16.93■□□□□ 0.3
SF1-211ENST00000448404 ATP8A2Q9NTI2 1148 aa16.93■□□□□ 0.3
SF1-211ENST00000448404 SRPRBQ9Y5M8 271 aaKnown RBP16.93■□□□□ 0.3
SF1-211ENST00000448404 NID2Q14112 1375 aa16.92■□□□□ 0.3
SF1-211ENST00000448404 TSPY3P0CV98 308 aa16.92■□□□□ 0.3
SF1-211ENST00000448404 TSPY8P0CW00 308 aa16.92■□□□□ 0.3
SF1-211ENST00000448404 CD44P16070 742 aaKnown RBP16.92■□□□□ 0.3
SF1-211ENST00000448404 CDC25BP30305 580 aa16.92■□□□□ 0.3
SF1-211ENST00000448404 MYL5Q02045 173 aa16.92■□□□□ 0.3
SF1-211ENST00000448404 MFSD14BQ5SR56 506 aa16.92■□□□□ 0.3
SF1-211ENST00000448404 XDHP47989 1333 aa16.92■□□□□ 0.3
SF1-211ENST00000448404 SCG2P13521 617 aa16.92■□□□□ 0.3
SF1-211ENST00000448404 TTC38Q5R3I4 469 aa16.92■□□□□ 0.3
SF1-211ENST00000448404 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
SF1-211ENST00000448404 CREBRFQ8IUR6 639 aa16.92■□□□□ 0.3
SF1-211ENST00000448404 TIGD1Q96MW7 591 aa16.92■□□□□ 0.3
SF1-211ENST00000448404 ARPP21Q9UBL0 812 aaPredicted RBP16.92■□□□□ 0.3
SF1-211ENST00000448404 MYH6P13533 1939 aa16.91■□□□□ 0.3
SF1-211ENST00000448404 SEMA3EO15041 775 aa16.91■□□□□ 0.3
SF1-211ENST00000448404 ORC4O43929 436 aa16.91■□□□□ 0.3
SF1-211ENST00000448404 DOK7Q18PE1 504 aa16.91■□□□□ 0.3
SF1-211ENST00000448404 USP17L2Q6R6M4 530 aa16.91■□□□□ 0.3
SF1-211ENST00000448404 HEATR3Q7Z4Q2 680 aa16.91■□□□□ 0.3
SF1-211ENST00000448404 TNFRSF25Q93038 417 aa16.91■□□□□ 0.3
SF1-211ENST00000448404 EEF2KMTQ96G04 330 aa16.91■□□□□ 0.3
SF1-211ENST00000448404 NFE2L3Q9Y4A8 694 aa16.91■□□□□ 0.3
SF1-211ENST00000448404 GTF2IP78347 998 aa16.91■□□□□ 0.3
SF1-211ENST00000448404 PROM2Q8N271 834 aa16.91■□□□□ 0.3
SF1-211ENST00000448404 RTFDC1Q9BY42 306 aaPredicted RBP16.91■□□□□ 0.3
SF1-211ENST00000448404 FAM237AA0A1B0GTK4 181 aa16.9■□□□□ 0.3
SF1-211ENST00000448404 SCNN1DP51172 638 aa16.9■□□□□ 0.3
SF1-211ENST00000448404 DPYDQ12882 1025 aa16.9■□□□□ 0.3
SF1-211ENST00000448404 E4F1Q66K89 784 aaPredicted RBP16.9■□□□□ 0.3
SF1-211ENST00000448404 MTERF4Q7Z6M4 381 aaKnown RBP16.9■□□□□ 0.3
SF1-211ENST00000448404 SMARCE1Q969G3 411 aa16.9■□□□□ 0.3
SF1-211ENST00000448404 KCNQ5Q9NR82 932 aa16.9■□□□□ 0.3
SF1-211ENST00000448404 PCDHAC2Q9Y5I4 1007 aa16.9■□□□□ 0.3
SF1-211ENST00000448404 FAM177A1Q8N128 213 aaPredicted RBP16.9■□□□□ 0.3
SF1-211ENST00000448404 UBA5Q9GZZ9 404 aa16.9■□□□□ 0.3
SF1-211ENST00000448404 QTRT2Q9H974 415 aaKnown RBP16.9■□□□□ 0.3
SF1-211ENST00000448404 XBP1P17861 261 aa16.89■□□□□ 0.3
SF1-211ENST00000448404 ZNF804AQ7Z570 1209 aa16.89■□□□□ 0.3
SF1-211ENST00000448404 TEX11Q8IYF3 940 aa16.89■□□□□ 0.3
SF1-211ENST00000448404 TMEM47Q9BQJ4 181 aa16.89■□□□□ 0.3
SF1-211ENST00000448404 DDAH1O94760 285 aa16.89■□□□□ 0.29
SF1-211ENST00000448404 RASA1P20936 1047 aa16.89■□□□□ 0.29
SF1-211ENST00000448404 ADKP55263 362 aaKnown RBP16.89■□□□□ 0.29
SF1-211ENST00000448404 KLHL34Q8N239 644 aa16.89■□□□□ 0.29
SF1-211ENST00000448404 WDR66Q8TBY9 1149 aa16.89■□□□□ 0.29
SF1-211ENST00000448404 GGA1Q9UJY5 639 aa16.89■□□□□ 0.29
SF1-211ENST00000448404 INF2Q27J81 1249 aa16.89■□□□□ 0.29
SF1-211ENST00000448404 SHROOM1Q2M3G4 852 aaPredicted RBP16.89■□□□□ 0.29
SF1-211ENST00000448404 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
SF1-211ENST00000448404 TBC1D16Q8TBP0 767 aa16.89■□□□□ 0.29
SF1-211ENST00000448404 PAGE5Q96GU1 130 aa16.89■□□□□ 0.29
SF1-211ENST00000448404 MTRQ99707 1265 aa16.89■□□□□ 0.29
SF1-211ENST00000448404 MAD2L2Q9UI95 211 aa16.89■□□□□ 0.29
SF1-211ENST00000448404 SMTNL1A8MU46 457 aa16.88■□□□□ 0.29
SF1-211ENST00000448404 CDK11BP21127 795 aaKnown RBP16.88■□□□□ 0.29
SF1-211ENST00000448404 SFPQP23246 707 aaKnown RBP eCLIP16.88■□□□□ 0.29
SF1-211ENST00000448404 WWC2Q6AWC2 1192 aa16.88■□□□□ 0.29
SF1-211ENST00000448404 CCAR2Q8N163 923 aaKnown RBP16.88■□□□□ 0.29
SF1-211ENST00000448404 LRRN4CLQ8ND94 238 aa16.88■□□□□ 0.29
SF1-211ENST00000448404 PRIMPOLQ96LW4 560 aa16.88■□□□□ 0.29
SF1-211ENST00000448404 BPIFA3Q9BQP9 254 aa16.88■□□□□ 0.29
SF1-211ENST00000448404 TMEM60Q9H2L4 133 aa16.88■□□□□ 0.29
SF1-211ENST00000448404 RBM28Q9NW13 759 aaKnown RBP16.88■□□□□ 0.29
SF1-211ENST00000448404 CACNB3P54284 484 aa16.88■□□□□ 0.29
SF1-211ENST00000448404 KARSQ15046 597 aaKnown RBP16.88■□□□□ 0.29
SF1-211ENST00000448404 PFKFB3Q16875 520 aaPredicted RBP16.88■□□□□ 0.29
SF1-211ENST00000448404 CEP135Q66GS9 1140 aa16.88■□□□□ 0.29
SF1-211ENST00000448404 CCDC94Q9BW85 323 aaPredicted RBP16.88■□□□□ 0.29
SF1-211ENST00000448404 LEMD3Q9Y2U8 911 aa16.88■□□□□ 0.29
SF1-211ENST00000448404 FRMPD2Q68DX3 1309 aaPredicted RBP16.88■□□□□ 0.29
SF1-211ENST00000448404 FAM196BA6NMK8 535 aa16.87■□□□□ 0.29
SF1-211ENST00000448404 TEX33O43247 280 aa16.87■□□□□ 0.29
SF1-211ENST00000448404 CPLX3Q8WVH0 158 aa16.87■□□□□ 0.29
SF1-211ENST00000448404 CDK8P49336 464 aa16.87■□□□□ 0.29
SF1-211ENST00000448404 CUL4BQ13620 913 aa16.87■□□□□ 0.29
SF1-211ENST00000448404 MORC3Q14149 939 aa16.87■□□□□ 0.29
SF1-211ENST00000448404 SBK1Q52WX2 424 aa16.87■□□□□ 0.29
SF1-211ENST00000448404 SPTY2D1Q68D10 685 aaPredicted RBP16.87■□□□□ 0.29
SF1-211ENST00000448404 SARSP49591 514 aaKnown RBP16.86■□□□□ 0.29
SF1-211ENST00000448404 CBX1P83916 185 aa16.86■□□□□ 0.29
SF1-211ENST00000448404 LRRC47Q8N1G4 583 aaKnown RBP16.86■□□□□ 0.29
SF1-211ENST00000448404 CEP95Q96GE4 821 aa16.86■□□□□ 0.29
SF1-211ENST00000448404 IKBKBO14920 756 aa16.86■□□□□ 0.29
SF1-211ENST00000448404 ZSCAN20P17040 1043 aaPredicted RBP16.86■□□□□ 0.29
SF1-211ENST00000448404 TPM4P67936 248 aa16.86■□□□□ 0.29
SF1-211ENST00000448404 PTPN14Q15678 1187 aa16.86■□□□□ 0.29
SF1-211ENST00000448404 EYA3Q99504 573 aa16.86■□□□□ 0.29
SF1-211ENST00000448404 MTA3Q9BTC8 594 aa16.86■□□□□ 0.29
SF1-211ENST00000448404 OSBPL5Q9H0X9 879 aaPredicted RBP16.86■□□□□ 0.29
SF1-211ENST00000448404 FLT1P17948 1338 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms